Scyliorhinus canicula (smaller spotted catshark): 119974718
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Entry
119974718 CDS
T11175
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119974718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119974718
03036 Chromosome and associated proteins [BR:
scau03036
]
119974718
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
119974718
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
119974718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
119974718
NCBI-ProteinID:
XP_038669799
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Position
1:278086132..278241030
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AA seq
1213 aa
AA seq
DB search
MSADQITTLCEQLMKAVNVIMDGGSSSRYRLEALKFCEEFKEKCPHTVQCGLRLAEKNNT
GIVRHFGLQILEHSIKFRWNGMVHRDKVQLKNSVMTLLSRGTHNIMVEEAYIKDALSRIV
VEMIKREWPQQWPDMLNEMDKLTAMGETQTELVMLILLRLVEDVVTFQTIPAQRRKDIQH
ALTQNMMQLFSFLLDILQEHTQSYKQLKADSTQENKAKAHCRVAVATLNTLAGYVDWVAL
HHITADSCKLLEVLCMLLTEPELQLEAAECLLIAISRKGKLEDRKPLLVLFSDAAMHCIL
SAAQTAHGAGLVEQHYMFLKRLCQVLTALGGQLTALWGSDKDIGQPPNFNKYLQAFLAFT
NHPSQYLRSSTQIAWCSFLRHEHVSKDTVLLDVIPQLLHATMANLLKVGFPSKSDSPSCE
YSRVDFDNDEDFNAFFNSFRAQQGETIRLSCRLSPMTGFNMASEALQYQLTAVIDVGPTM
CKHSVCVSKTGKGLCSIFSPSFVQWDALTFFMESVMSQLFRTMEPEQLPVPDGIELLKAV
LSYQTHDPLILSCILTAVSTLSPFLLHDATVLPQVLEKLFASATFEVIEESQGLQAPRTR
AVKNVRRHACSSILKMCRDHPELIMPVFEMFYAHVKRLQQDERQLTQLEKCALMESLVLL
SNQFKAYERQKAFLGELMAPVTNLWLSEEMQRVLSDPAMFLSYIGADVTPDDPIREDPAG
INRSRISLCVYTILGVVKRARWPNDLEEAKAGGFVVGFTPSGSPIYRNACTEHVIKLLDN
LLALIRTHNNLWLPEMLAQLSPHFTKAHDMLEVEKNAILGIPQPLLDHADAPVYKSVLER
MQGFFCTLYDNCFHILGNAGPSMLQDFFDIANFAESVINSAFVNLENIPDYRLRPVLRVF
VKPLVQSCPPEHYESVLCPILGPLFSYLLQRLSAKWVVINQRGLLEAESGVPEENPESQE
MLDEQLTRLLTRESIDLMTVCCCVKKGPESISGEMDDDEMMNTNDGPHVGSEELTDLGKC
LLKSEDICKALLATAYSAITWSDTITCQRATLQLCWPLIKQVLSATLHSDAASWFFMSVL
RGLQMHGQHEGCLAALVHLAFMIYEALRPRYPDLKTVMQQVPQISGDALDQFDTKLLNPS
SHKMGDKRRKDLFKKLLSGCIGKPLGQKFKKEVHIKNLPSLFKKPKPQPTTPIEETTEDN
ILTPLFDPRAQDM
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgatcagatcacgacgctgtgcgagcagttgatgaaggcggtaaacgtgatc
atggacggaggctcgagttcgcgctaccggctggaggccctgaagttttgtgaagagttt
aaggagaagtgtccacacacagtgcagtgtgggttacgcctggctgagaaaaataataca
gggattgtccgccattttggacttcagatactggaacattctatcaagtttcgctggaat
ggtatggtgcatcgtgataaggtccaactgaagaatagtgtgatgactctcctttcacgt
ggtactcataatatcatggtggaagaggcttacattaaagatgcactttcccgcattgtg
gtagaaatgatcaagcgggagtggccacagcagtggccagatatgctaaatgaaatggat
aaactaactgccatgggggagacacaaactgagctggtgatgttaatccttctgcgcctg
gtggaagatgtggtgactttccagaccatacctgcacagcgtcgtaaggacatccagcat
gcactgactcaaaatatgatgcagctttttagtttcctcttggacatcttgcaggagcac
actcagagctacaaacagctgaaagcagatagtactcaagaaaataaggctaaggcacac
tgtcgtgttgcagtagcaactctcaataccctagctggatatgtggattgggttgcattg
caccatattacagctgatagctgcaagctacttgaggtgttgtgcatgttactaactgaa
cccgaattgcagcttgaggcagcagaatgtctactcattgccatcagccgaaagggtaaa
ctggaggatcgcaagcctctcctggtcctctttagtgatgcagccatgcactgcattttg
tcagctgcacagacagctcatggagcagggcttgtggaacaacactacatgtttctgaag
aggctttgtcaagtacttacagccctaggtggacagctgactgcattgtggggtagcgat
aaagatattggccaacctcctaatttcaataaatatttacaagcatttttggctttcacc
aatcatcctagtcagtatttaagatcttcaacccagatagcttggtgttcatttttacga
cacgagcatgtctctaaggacactgtattgctggatgtcattccacaattgttgcatgca
acaatggctaatcttctgaaggttggatttccttccaagagtgacagcccaagttgtgaa
tattctcgtgtggactttgataatgatgaagacttcaatgcatttttcaattcattcaga
gctcaacaaggagaaaccattagactctcttgtcgtctatcaccaatgactggattcaac
atggcttctgaggcactgcaatatcagcttactgcagtgattgatgttggcccaactatg
tgtaagcattctgtttgtgtctctaagactggcaaaggtttgtgctctatcttttcgcca
tcttttgtgcaatgggatgcattaaccttctttatggagagtgtgatgagccaactattc
agaacaatggaacctgagcaattaccagtgccagatgggattgagctactcaaagctgtt
ttaagctatcaaacccatgacccacttattctgtcatgcatcctgacagccgtgtccaca
ctttctcccttccttctccatgatgccactgtcttgccacaagttctcgagaagctcttt
gcgtctgctacttttgaagtgattgaggagagccaggggttgcaggctccaagaactaga
gcagtgaagaatgttcgcaggcatgcttgttcatccattctcaagatgtgcagagatcac
ccggaactgatcatgccggtgtttgaaatgttctacgcgcacgtcaagcgcctgcaacag
gacgaaaggcagcttacacagttggagaagtgtgccttaatggaatctcttgttctcctg
agcaatcagttcaaggcttatgaacgacaaaaagccttcctgggggaactcatggcccct
gttactaacctttggttgtctgaggagatgcaaagagtgctttcagatccagcgatgttt
ctttcatacattggtgcagatgtcactccagatgatcccattagagaagatccagcaggc
atcaatagatctcggatcagcttgtgtgtttacaccatacttggagttgtgaagcgggct
cgctggcctaatgacctggaggaggcaaaggccggagggttcgtggttggattcacaccc
agcgggtctccgatctaccgcaacgcctgcactgagcatgtcatcaaacttcttgacaac
ctgctcgccctgataaggacacacaataatctttggctgccagagatgttggcccagctg
agcccgcacttcacaaaagcccatgacatgctggaagtggaaaaaaatgctattctcgga
attccacagcctctgcttgatcatgctgatgctccagtgtacaaatctgtgttggaacga
atgcaaggcttcttctgtactttgtatgacaattgtttccacatccttgggaatgcagga
ccaagtatgcttcaagattttttcgacatagccaattttgcagaatctgtaataaattca
gcctttgtgaacctggagaatattcctgactacaggctccgtccagtgttacgtgtattt
gtgaagcctttggtccagtcttgcccacctgaacattatgaatctgtgctgtgcccaatt
cttggacccctgttctcctacctactgcagagactaagtgccaagtgggttgtcatcaat
cagagaggcctgttggaggctgaaagtggtgttcctgaggagaatccagagtcgcaagaa
atgctggatgagcaactgactcgccttctcacccgcgaatcaattgatctgatgactgtg
tgctgttgtgttaagaagggccccgagtcgatatcgggtgaaatggatgatgatgaaatg
atgaacacaaatgatggtccacatgttggatctgaagaactcactgaccttggaaagtgt
ctgctcaagtctgaggatatctgtaaggcactgttagcaactgcgtatagtgcaatcact
tggagtgatactataacatgccagcgagcgacactccaactctgctggccattgatcaag
caggtattgtccgcaaccctgcattcagacgcagccagttggttcttcatgagtgtgctt
cgagggctgcaaatgcatggacaacatgaaggctgccttgcagcattggtccatcttgct
ttcatgatctatgaggcactgagaccacgatatcctgatttgaaaacggtgatgcaacag
gttcctcaaatctctggagatgctttggatcaatttgatacaaaacttctgaatccatca
tctcataaaatgggtgacaaaaggagaaaggacctcttcaagaaactcttgtctggttgc
attgggaagccacttgggcagaagttcaaaaaagaggtgcatatcaaaaacttgccctcc
ctttttaagaaaccgaagccacagcccaccacaccaatagaagaaacaactgaagacaat
atcctaactcctctctttgatcctagagctcaggacatgtga
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