Scyliorhinus canicula (smaller spotted catshark): 119974733
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Entry
119974733 CDS
T11175
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 2
KO
K24318
scavenger receptor class F member 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119974733 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119974733 (scarf1)
Membrane trafficking [BR:
scau04131
]
Endocytosis
Phagocytosis
Scavenger receptors
119974733 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
119974733
NCBI-ProteinID:
XP_038669850
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Position
12:160952547..160983721
AA seq
449 aa
AA seq
DB search
MGLLLILVSLYPLTSTSHIQQLNPNGNNVCELIRTPPSWSCCPGWRQQGNECTIAVCQEP
HSCRPEEICVRPGVCRCPHGFFGAGCTTRCPEQFWGPECRNACPCHPHGTCDAVSGVCTC
SQGRWGPRCAMRCQCRHGRCDPGTGHCQCHPGWWGADCSKMCMCHLEHSLCDPATGECNC
SSGYWGKQCNIYCFCNRSACAQLTGVCECREGWWGSLCERRCFCVHGRCIASNGQCKCHS
GYQGQSCRDSCTAGYYGNNCRERCGHCQGSQPCSPFDGSCHPCQRGWNGSRCDQPCAPGF
HGQNCAEGCPTCRQGETCNSVTGICQACNPGWIGPRCESSCTSGTFGRGCRSTCAECNYG
KCHHVTGECVCQAGYTGSSCNVTCLDGSYGMKCSTWCSCLGASCDHVTGECFFSKTGVLI
AVVMTILLVLLCIFCCCCCGKDRNDTKNR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggactcctgctcatcctggtcagtttataccctctgacctcaacctcacacattcag
caacttaatccgaatgggaacaatgtgtgtgaattaataaggactccccccagttggagc
tgctgcccgggttggaggcagcaagggaatgaatgcaccatcgccgtctgtcaggaacca
cattcctgccgtccggaggaaatctgtgtgcgacctggagtctgtcgctgcccccatgga
ttcttcggagccggctgcacgacgaggtgtccggagcagttctggggcccagagtgtcgg
aatgcctgcccgtgccatccccacgggacgtgcgacgccgtgtcaggggtgtgtacctgc
tcccaggggcgctggggcccgcgctgtgccatgaggtgtcaatgtcggcacggtcgctgc
gacccagggactggccactgccagtgccaccctggctggtggggggctgactgcagcaag
atgtgcatgtgccacctggagcactcgctctgtgacccagccactggcgagtgtaactgc
tcctccgggtactggggcaagcagtgcaacatctactgtttctgtaaccgatccgcctgc
gcccagctgactggagtgtgcgagtgccgtgagggctggtggggctctctgtgtgagaga
aggtgtttctgtgtccacgggagatgtatcgccagcaacgggcagtgtaagtgccactct
gggtaccagggacagagttgcagagactcctgtactgccggctactatggaaacaactgc
agggaaagatgcggtcactgccaggggtcacagccctgctccccattcgatggttcctgt
catccctgtcagcgcggttggaacggaagtcgctgtgaccagccctgcgccccgggattt
cacggccaaaactgcgcagagggatgcccaacctgccggcaaggggagacgtgcaactct
gtgactgggatttgccaagcctgcaatcccggatggattggacccaggtgtgaatcctcc
tgcacatctggaacctttgggcgtggctgtcgctcgacctgtgcagagtgtaactatggg
aagtgccatcacgtcactggggagtgcgtctgccaagcgggatatactggatccagttgt
aacgtcacctgtttggatggatcctatgggatgaagtgttccacgtggtgtagctgcctc
ggagcgtcttgtgaccatgtgacaggagagtgttttttcagtaaaacgggcgtcctgata
gctgttgtcatgacgattctcctcgtcctcctctgcatcttctgctgttgttgctgtgga
aaggacagaaatgacaccaagaacaggtag
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