Scyliorhinus canicula (smaller spotted catshark): 119974777
Help
Entry
119974777 CDS
T11175
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119974777 (dennd4a)
Membrane trafficking [BR:
scau04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119974777 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
119974777
NCBI-ProteinID:
XP_038669943
LinkDB
All DBs
Position
12:complement(2529880..2725239)
Genome browser
AA seq
2018 aa
AA seq
DB search
MMEGPRVADYFVVAGMTNASKPLEEEIQFNDSCHKVAKPKAPITELAIIVKSLGEEVPQG
YTCVETTQSGLLADLNNGSLMGPQILLCYKRGRDKPPLTDLGVLYEWKERLKHGCQIIQT
TPYGRPANISGGTSSQRIYVTYRRAPENIAQNSLAVTEICIIVPSKGETAPHTFCRVDKN
LNSSMWGSAVFLCYKKSLAKTNTIAYKAGLICRYPEEDYESFPLPASVPLFCLPMGTAIE
CWPCNTKYPLPVFSTFVLTAASATKVYGAAIQFYEPLPQEKLTDKQRSQLGLVSAADRRP
ILSKTVHTSKCICLLSHWPFFEAFRKFLTFLYRYSISGPHALPIEKHICHFMHNVPFPSA
QRPRILVQQSPHDYLMLCQPVSSPLPLSGGSFTTLLQNLGPEKAISLLLYAVTEHKILIH
SLRPAVLTSVAEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYDPP
SDVSCVDLDTNTISQIDDRKSLTWKILPKKACKNLINSLNNIYEQLAEMNQRPREEALME
LSMNDHDVNFGKRMHMLEMEIQETFLRFMASILKGYRTYLLPITEAPSEKATDASSLFDL
QGFLKSRDRSHQKFYSLMTKTQMFIRFIEECTFVSDKDASLAFFDDCVDKLDAERPDDVR
LIELDESHKSEHTVFITPPELPTLPNGEEYPLRYSYTSFPVLTPELFDRPVDLLKNPASR
LTSKNSCPNSPAPMGRRTKQEIKSAQKIAKRYSSIPQMWSKCLLRHCYGLWFICLPAYVK
VCHSKVRALRTAYDVLRKMQVKKLEPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMKKAGV
HPNAITYGYYNKAVFESTWPSSNRGGFFLWMKMRNVMLATAQFRRALKKAPANPPQTPGL
SADGSDLDAVSHGSMDSSNDTNTVEQPQFSSELMKVDSTDDRSSTARLGCSLSCGYGCQE
SLSERVPSLSPWICSEMKTERMFSGGQSDLGYNSLSKEEVRRGDLSSALGSEQSAVGQAV
DKDDKKESDSSSLSESESTKGSGDCLSHLDFQGSRTDSKPVTRIVKMNCSFESADPNQST
EGGNENVAGLLFTTPFDNAAYPEPALVHGDSLRKRHKSAMEPGLKEQMVWGGRNRSRSGD
AFAGLMMHRGSMDTDPREIAEKLGADAEILSKALQMASRPNTLEIIKPRHTHQQVSLNLE
KELSDEDTPYDLDETSANVEDDKTDSPAIFDLEDLDGEPDYGKSNGKCNQNPRRGLPPKQ
LRRSMSVGAGIKLAERRGVQRGYDPLSLLVAETNQEEEEEDYDKCLFTPSARRNLAEEIE
MYMDSMSSPLTSRTPSIDFSKTDDDSATSSNCKSLPVVKVSRRSSLPAGSPRTTGLCRSR
TLQPHAKGELTVKQRDRLWSSPSYSPSSNKRMGVRETGGALSLMSPPPFTLDTLRPPTFD
VLKHSMFSAGKGVAEKASKWYSKLATYAVPIKDNDTGRHSERNSISSFGALDPDAASLNE
DVYDDLDRRASPQVSSMPAGEDKGWGLRQASLDSSGNHDGTPRQQLQIGSVQSTSSNFPS
ADKSDVGSSQYTSSTSIFQNYAIEILISSCSRCRTCDSLVYDEEIMAGWTADDSNLNTIC
PFCGNLFLPFLGIEIRDLRGPGRYFLKSTPSTESMQSLQSGPSCPGTKNTMVSPPGPGVI
DSKPQSPRITVQGAPDMPGEQPLSARCIQIPSERWHGINESLSLGQTIARSIGGCGSVTE
EPSTRRHVHAVSTGSLPTNLNDSTNPLGLEWQLPNPDPITVPYLSPLVLWKELESLLENE
GDQVISMATFVDHHPIVFWNLVWYFRRIDLPTNLPGLVLTSEHCNKSVSIPRSWMSEDSK
HVLIQMLWDNLKLHQVPSQPFYILWNAKSLNYTLLFETKKHPLVQTLRDEACLFNKDFLD
TVVKSIQMNDICKPISQILEVLSRQPHFKRQRSLYREILFLSLVALGKDNIDIDAFDREY
KRAYDRLTPSEVKLTSNCDRPPSSGVMECRRTFGEPYL
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggaccacgtgtcgctgactattttgtggtggcaggcatgaccaacgcatca
aagccacttgaagaggaaatacaatttaacgacagctgccacaaagttgctaaaccaaaa
gcaccgatcacagaattggctatcattgtgaaatcgttgggtgaagaagttccccaaggg
tatacgtgtgtggaaaccactcagtctggattattggctgacctcaataatgggagcttg
atgggtccacagattttgctttgctacaaaaggggtcgagataagccgcctctgactgac
ctcggtgttttgtatgaatggaaagagaggctaaagcatggatgtcagatcattcaaacc
acaccttatggccgacctgctaatatcagcggtggaacttcatctcaacgaatctacgta
acgtaccgtcgagcacccgaaaacatagcccagaattccctggccgtcactgaaatctgt
ataattgtcccaagtaagggagagactgcaccacacactttctgcagggtggacaaaaac
ctaaacagcagcatgtggggatcagctgtattcttgtgttacaaaaagtccttggccaag
accaataccatagcatacaaagctggtttgatatgtagatatccagaggaagattatgaa
tcatttccattgcctgcatcagtacctctcttttgtctgccaatgggaacagccattgag
tgttggccttgtaataccaaatatccactccctgtcttttctacgtttgtgcttacagca
gcgtctgcaacaaaggtttatggtgcagctattcagttctatgaacctcttcctcaagag
aagctaactgacaagcagcggtcacaattagggctggtcagtgctgccgaccgcagaccc
atcctctcgaaaacagttcacacaagcaaatgcatctgtcttctctcgcactggccattc
tttgaagcttttcgaaaatttctcacatttttataccgctattcaatctctggacctcac
gcactacctattgagaagcacatctgtcatttcatgcataatgtcccatttccttctgct
caaagaccaaggattcttgtgcagcaatcaccacatgattacctgatgctttgccagcct
gtatcatcaccactgccattgagtggtggtagtttcactaccttgctgcagaatctaggc
ccagagaaagcaataagtctgctgctatatgcggtaactgaacacaagattctgattcac
tctctccgcccagctgtattgactagcgtggctgaagcacttgtttctatgatatttcca
ttccattggccatgtccatacattcctctatgcccgttggctctggcagacgttctcagt
gccccatgccctttcatcgtaggggttgattctcgctactttgacctatatgatcctcca
agtgatgtaagctgtgtggacttggacaccaacactatctctcaaattgatgatagaaaa
agccttacgtggaaaatacttccaaagaaagcttgtaaaaatctgatcaactctttgaac
aacatttatgagcagctggcagagatgaatcaaagacccagagaggaagctttaatggag
ttgtcaatgaatgatcatgatgtgaactttggtaagaggatgcacatgctggaaatggag
atacaagaaactttcctccgattcatggcttccattctgaaaggttacagaacatatctt
ctacccatcacagaagctccgtctgagaaagcaacagatgcaagctcgctgtttgatctt
caaggttttctgaagagccgggaccgttctcaccagaagttttattcattaatgactaaa
acgcagatgtttattcgattcattgaggaatgtaccttcgtgagtgacaaggatgcaagt
ctggctttctttgacgattgtgtggataaattggatgcggagcggccagatgacgtgcgt
ctcatagaattggacgagtctcacaaaagtgaacatacggttttcattacacctcctgag
cttccaaccttgcctaatggagaagaatacccccttcgatatagttacactagcttccct
gtgctaacgccagagctatttgatagaccagtggatttattaaaaaatccagcgagcagg
ttaacttcaaaaaatagttgccccaacagtccagcaccaatgggcagaagaactaagcag
gaaataaaatcagctcaaaaaatcgcgaagcgttattcatcaattcctcagatgtggtca
aaatgtctcctccgtcactgctatggtctctggttcatttgccttcctgcttatgtgaaa
gtttgccattcgaaggtcagagctcttcggacagcttatgatgtgctgagaaaaatgcag
gttaagaagttggagccacctgatgaggtgtgttaccgtgttctgatgcagttatgtggg
cagtacgggcagccagtgctcgctgtgagggtcctgtttgaaatgaagaaagctggggtt
catcccaatgcgataacatatggttactacaataaggctgttttcgagagtacttggcca
tcgagcaacagaggcggcttctttctgtggatgaagatgaggaatgtgatgcttgcaaca
gctcagttccgcagggctttgaaaaaggctccagcaaacccaccgcagactccggggctc
tcggcagatggcagtgacttggatgctgtcagccatggcagcatggatagctctaatgac
actaacactgtggagcaaccccagttcagctctgagctgatgaaagtagattccactgat
gatcgatctagcacagctagacttggctgtagcttgagttgtggatatggctgccaggag
tccttgtctgaaagagttccatctctctctccctggatttgctcagaaatgaagactgag
cgtatgttttcaggtgggcagtcagatcttggatataattccttatcgaaggaagaggtt
cgacgaggagacctgtcttcggcccttggatctgagcagtctgcagtgggtcaagcagtg
gataaagatgacaaaaaggagagcgactccagctcattatcggagagtgaaagtacaaag
ggcagtggagattgtctgtcccatttggattttcaaggcagcagaactgactcaaaacct
gtgaccagaatcgtaaagatgaactgcagctttgaaagtgcggatcctaatcagagcact
gagggaggcaatgaaaatgtggcaggattgctgtttacaacaccttttgataatgctgca
tatcctgagcctgcactagtacatggtgacagtttacgcaagaggcacaagagcgctatg
gagcctggcttgaaggaacaaatggtgtggggaggccggaatcgcagtcgtagtggtgat
gcttttgcagggctgatgatgcacagaggaagtatggacacagaccccagggaaattgca
gaaaaattgggtgctgacgctgaaatattatcaaaagctttacaaatggcctcaagacca
aacacgctggagattatcaaacccaggcacacgcaccaacaggtgagcttaaatctagaa
aaggaactgagtgacgaagacacgccatatgacttggatgaaacatcagccaatgtggag
gatgataaaacggactctcctgctatctttgacttggaagatctggatggtgagcctgat
tatgggaagtcgaatgggaaatgtaaccaaaatcccaggcgagggctgccgcccaagcag
ttgcggaggagtatgagtgtaggagcagggatcaaactagcagaaagaagaggggtccaa
agagggtatgacccgctttctcttctagtcgcggaaaccaatcaggaagaagaggaggaa
gactacgataaatgtcttttcactccttcagctcggcgaaacttagctgaagagatagag
atgtacatggattctatgagcagtcccttgacgagtcgcacacccagcatagatttctca
aaaacagatgatgatagcgcgacatcatctaattgcaaaagtttgcctgtagtaaaggtg
tcaaggaggtctagccttccagcaggctcccccagaacaacgggactctgtcggtccagg
acacttcaaccgcatgcaaagggagaactcactgtcaagcaaagggacaggctctggtcc
tcaccatcatactctccaagtagcaacaaaagaatgggagttcgagagacaggtggagct
ttatctctcatgtcgccacccccttttacactggacacattacgaccacccacttttgat
gtgctaaaacacagcatgttctctgctgggaagggagtggcagaaaaggcaagcaaatgg
tacagcaagttggcaacatatgctgtccccatcaaggataatgatacgggacgtcattcg
gagagaaatagtatctcctcatttggagcactggaccctgatgctgcttctttaaatgag
gacgtatatgatgacttggacagacgagcttcacctcaagtcagtagcatgcctgcaggt
gaggacaaaggatggggcctgagacaagccagtttggacagctcaggaaaccatgatggg
acacctcgacagcaactacaaatcggcagtgttcaatcaacaagttccaactttccttca
gcagacaaatcagatgtaggatcttctcaatatacaagcagcacgagtatcttccagaat
tatgccatcgagattcttatctccagctgttctcgatgtcgaacatgcgactcactcgtg
tatgatgaggaaataatggctggctggacagcagatgactccaatctcaacacgatatgt
ccattctgtggcaatctgttccttcctttcctggggattgaaattcgagatctgcgaggc
cctggcaggtattttctgaaatccactccatctacagaaagcatgcagagtttgcaatct
ggaccatcttgcccagggactaagaacacgatggtctccccacctggtccgggtgtgatc
gacagcaagcctcagtcaccaagaattacagtgcaaggagccccagacatgcctggtgag
cagcccttgtcagcaagatgcattcagataccttcagagagatggcacgggattaatgag
tccctatcactgggacagacaatcgcacgaagcatcggtggatgtggctctgtaactgag
gagccgagtactcggagacacgtccacgctgtctcaacaggcagcctcccaactaatctg
aatgattcaacgaatccactgggcttagagtggcagttaccgaatcctgatcctataacc
gttccttatttgagccccttggtgctgtggaaagaactggagagtttgctggaaaacgaa
ggtgatcaagttatatccatggcaacattcgtggatcaccatccaattgtattctggaat
ttggtctggtatttccggcgtattgatctacctaccaacttgccgggactcgtactaact
tcagaacactgcaacaagagcgtgtcgattccacgtagctggatgtctgaggacagtaag
cacgttttaattcagatgctgtgggacaacctgaaattgcatcaagttcccagtcagccg
ttctacatcctgtggaatgctaagagtcttaattacactcttttatttgagactaagaaa
catccccttgttcaaacactgcgagatgaagcttgcttattcaacaaggattttctggat
actgttgtgaagagtattcagatgaatgacatctgtaagccaataagtcaaattctggag
gtgttgagcaggcaaccacattttaaacggcaacggagtttatacagagagattctgttc
ctctcacttgtggcacttgggaaagacaacattgatatagatgcatttgaccgagaatat
aagagggcgtatgatcggctaactccgagcgaggtgaagctgacttctaattgtgaccgg
cctccaagctctggagttatggagtgtcgcaggacctttggtgaaccctacctctag
DBGET
integrated database retrieval system
