Scyliorhinus canicula (smaller spotted catshark): 119974942
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Entry
119974942 CDS
T11175
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119974942 (slc6a4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119974942 (slc6a4a)
Transporters [BR:
scau02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119974942 (slc6a4a)
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Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
119974942
NCBI-ProteinID:
XP_038670239
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Position
12:141025248..141111189
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AA seq
652 aa
AA seq
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MAVILPLNNEISALNSEKEPSDAAKDEGDCKENGVLIKPSEAGNQSPTSSLDKGEAGRIT
NGYSTVQSPVGHSGSSDGDRDCPLPSAACELQELDKPTDRETWSKKTDFMLSVIGYAVDL
GNVWRFPYIAYQNGGGAFLIPYLLMAVFGGIPLFYMELVLGQYHKNGAISIWRKICPIFK
GIGYAICIVALYVSFYYNTIIAWALYYLYSSFTSELPWTSCNNAWNTPNCTNYFLKDNIT
WTKYSTSPAEEFYVRQVLQIHRSHGLDDLGGISWHLALCLFFIFIVVYFSIWKGVKTSGK
VVWVTATFPYLVLFILLIRGATLPGAWRGLLFYLKPEWNKLLTTQVWVDAAAQIFFSLGP
GFGVLLAFASYNKFNNNCYKDALIISTVNCLTSFMSGCVMFTVLGYMAEMRNEDVGDVAK
DTGPSLLFITYAEAITNMPASTFFAIIFFIMLITLGLDSTFAGLEGVITAVLDEYSVLLR
KHREWFVLGLIIFCYLGALTTLTYGGAYVVKFFEEYATGAAIIAVVFLESIAVSWFYGMK
RFCRDVKEMLGFSPGWFWQTCWVAISPIFLLFIIASFLSTPLEIKLFDYTYPYWTAVVGY
CIGTSSFICVPSYMVYKIIITPGTFKQRLLKSITPEVEENETPNSGVHLNSV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcattcttcccttaaacaacgagatctccgccctcaactcggaaaaagagcca
tcggacgccgccaaggacgagggggactgcaaggagaatggagtcctgatcaagccctcg
gaggcgggaaaccagtcgcccaccagcagcttggacaagggggaagctggccgcatcacc
aatggttactcgactgtccagagcccggttggacacagtgggagtagcgatggagaccgg
gattgccccctgccgtccgccgcctgtgagctgcaggagctggacaagccaaccgaccgg
gagacctggagcaaaaagaccgacttcatgctctcggtcatcggctatgcggtggacctg
gggaacgtgtggcgttttccatacatcgcctaccagaacggaggcggggccttcctcatt
ccatatctcctgatggctgtgtttggaggcatcccacttttttatatggagttggtactg
ggacagtaccacaaaaatggagcaatttctatatggaggaaaatatgcccaatattcaaa
gggattggatatgcaatctgtatagtagctctgtatgtttccttttactacaataccatt
atcgcctgggctctgtactacctctattcatcatttacttccgagctcccatggaccagc
tgtaacaatgcatggaatactccaaactgtaccaactacttcctgaaagataacataact
tggacaaagtactccacttctcctgcagaagaattttacgttcgccaagtacttcaaatt
cacagatcacacggactggacgacctgggaggcatcagttggcatttagcgctttgtctg
ttctttatatttattgtggtgtattttagtatttggaaaggcgtgaagacttctggaaag
gtcgtatgggtaacagccactttcccctatctcgtactgtttattctcttgattcggggt
gccaccctgcctggggcctggcgaggactcctcttctatcttaagcctgaatggaataaa
ctgcttaccacccaggtgtgggtggacgctgctgcacagattttcttctcccttgggccg
ggatttggtgtcctcttggcatttgccagctacaacaaattcaacaacaactgttacaag
gatgctttgatcatcagcaccgtgaactgtctgaccagtttcatgtccggttgtgttatg
tttactgttcttggatacatggcggaaatgaggaatgaagacgtgggagacgtggccaaa
gacaccggccccagtctgcttttcattacttacgcagaggcaataaccaatatgcctgca
tccacgtttttcgccataatatttttcataatgctgatcacattggggttggacagtacg
tttgcaggcctggaaggagtgataactgcagtgctagatgaatattcagtgttactccga
aagcatcgtgaatggtttgtgcttggcctgatcatattttgctatttgggagctttgacc
accctcacatatggtggggcatatgtggtgaaattctttgaagaatatgctactggagct
gctatcattgctgtggtgtttctcgaatcaatagcagtgtcttggttttatggaatgaaa
cgtttctgcagagatgttaaagaaatgcttggtttcagccccggctggttctggcagacc
tgctgggttgccatcagcccaattttcttgctgttcatcattgccagcttcctgtcaact
cctctagaaattaagctctttgattatacatacccttattggactgctgtagttggctac
tgcattgggacttcttcatttatctgtgttccatcctacatggtttacaaaattataatt
actccaggaacatttaaacagcggcttttgaaaagcatcactccagaagttgaagaaaac
gaaactccaaattctggtgtccacctgaattctgtttga
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