Scyliorhinus canicula (smaller spotted catshark): 119974968
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Entry
119974968 CDS
T11175
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
119974968 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
scau03051
]
119974968 (psmc4)
Proteasome [BR:
scau03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
119974968 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
CENP-F_leu_zip
AAA_18
ATPase_2
NACHT
NTPase_1
AAA_3
TsaE
IstB_IS21
AAA_7
AAA_33
Parvo_NS1
NB-ARC
AAA_25
AAA_17
SKA2
AAA_24
ABC_tran
AAA_lid_PRS2_C
DUF3450
Motif
Other DBs
NCBI-GeneID:
119974968
NCBI-ProteinID:
XP_038670285
LinkDB
All DBs
Position
12:57426374..57456445
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AA seq
418 aa
AA seq
DB search
MEELGVMLEKVQEDIPSLVSSRPHTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFTTITGKMNLSEEVDL
EDYIARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgggagtgatgctggagaaagtacaggaggatatcccttccctcgtctcg
tccaggccccacactggcctctcctttctcgcccctgagcctgaggatttagaggatctc
tacagtcgttacaagaagctgcagcaggagctggagttccttgaggtccaggaggagtac
atcaaggatgaacagaagaatttgaagaaggagtttctccatgcccaggaggaggtgaag
cgcatacagagtatccctctggtcatcgggcagttccttgaggctgtcgatcagaacaca
gccatcgttggctcgacgaccggttccaattactatgtgagaattctgagcaccatcgat
cgagagctgctgaaacccaatgcttcggttgcgctccacaaacacagcaacgccctggtt
gatgtccttcccccggaggctgacagcagtatcatgatgctgacatcagatcagaaaccc
gacgttctgtactctgacatcggagggatggacattcagaagcaggaggtgagggaggcg
gtggagctgcccctcactcacttcgaactctacaagcagattggcatcgatcctccgcga
ggggtgctgatgtacggaccacctggatgtgggaagactatgctggccaaagccgtcgct
caccatacgacagcggcttttatccgtgtggtcggctcggagtttgtacagaagtacctt
ggggagggacctcgaatggttcgggatgtcttcagactggcgaaggagaatgctccagcg
atcatcttcattgacgagattgacgccattgcaactaagcgttttgatgcccagacaggg
gcggacagagaggtgcagagaatcctgctggaactccttaaccagatggatggcttcgat
cagaacgtcaatgtcaaggtgatcatggcgacgaaccgagcggatactttggacccagcc
ctgctccgacctgggcgcctcgatcgtaagattgagttcccgctcccggacaggcgccag
aagcgactgatcttcaccaccatcactggcaagatgaacctgtcggaagaagtggacctc
gaggattatatcgctcggccggacaagatttccggagctgacatcaattccatctgccag
gaggctggtatgctggctgtgagagaaaaccgctacattgtgctggcaaaggactttgag
aaggcttacaaaacagtcatcaagaaagatgaacaggaacatgaattctacaagtga
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