Scyliorhinus canicula (smaller spotted catshark): 119975016
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Entry
119975016 CDS
T11175
Symbol
cluha
Name
(RefSeq) clustered mitochondria protein homolog isoform X1
KO
K03255
protein TIF31
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
scau03012
]
119975016 (cluha)
Translation factors [BR:
scau03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119975016 (cluha)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_NPHP3
TPR_MalT
ANAPC3
GSKIP_dom
Motif
Other DBs
NCBI-GeneID:
119975016
NCBI-ProteinID:
XP_038670391
LinkDB
All DBs
Position
12:148456862..148572392
Genome browser
AA seq
1667 aa
AA seq
DB search
MGNTVSACCRLFTGFILRRQPEGLSDDRLPLLSDSRRECCVAPPGFTFLVKNESGASEER
PVQGYPDIVLSSVIASNSGPKSERSPRLDSVASKTGAPDSVERDWALSDQKDGCLNSGMC
LAALKRASPTSDDLPSALDEIPKQVKDHGCQPLVWHVCGKSEASACCTDNRLCCEETPVE
IADITDVGGKNIGLESSSELVSHGQECDFVQLARKGGERFKLETEAPENHSNTESVTKGH
CGHLIRDDATDPAPCALHQRPPELLMAATVDPRPECAQAVGKQVCLAPARSVDSWKERGK
LPSRGAAGTPPASQPPSSSGHLVTAEDNGALSGLGFPENPRKKRKKKRLLRSLSVGCEEA
HSSGMPLVNGDAGHDHLETENHKERVDDETRVDDENEQEVIVIQDTGFTVKMHAPGIEPF
DLQVSPQEMVQEIHQVLMDREDTCHRTCFSLQLDGNVLDNFSELKSIEGLHEGSNLKVVE
EPYTVREARIHVRHIRDLLKSLDPSDSYNGIDCNSLSFLSMFTEGDLGETGKRKRKGSEL
EQIDCTPPEHILPGSKERPLLFLQPQTKETKPLQCLKVLTMSGWNPPPGNRKMHGDLMYL
YVVTMEDRHVSITASTRGFYVNQSTAYIFNPKPANPSFLSHSLVELLSQTSPIFKKNFAT
LQKKRVQRHPFERIATPFQVYSWTAPVMEHAMDCVRAEDAYTSRLGYEEHIPGQTRDWNE
ELQTTRELPRKNLPERLLRERAIFKVHSDFAAAATRGAMAVIDGNVMAINPGEETKMQMF
IWNNIFFSLGFDVRDHYKDFGGDNAAYVAPTNDLNGVRAYNAVDVEGLYTLGTVVVDYRG
YRVTAQSIIPGILEREQEQSVIYGSIDFGKTVVSHAKYLELLEKTARPLKIQKHNVLSEK
DDEVELCSSVECKGIIGNDSRHYILDLLRTFPPDLNFLPVEGEELPEECSKMGFPKEHRH
RLSCLRQELIEAFVEHRYLVFMKLAALQLMQQKANRQEKDCAAMTENGSSCLTGAVENNK
TVLEDGKAEENLSGLDQARDLAESIASEDTTVDPKSKEVTLNAYKAVGSVSNTSFDIRFN
PDIFSPGVRFHDPDCEELQKQKQLLKDAAAFLVSCQIPSLIKDCVDQTVLPMDGATLAEA
IHQRGINIRYLAKIVQLVSKSLARQQLDHIHKLGVTELITRSVKHIFKIYLQGVELSGLS
VAISHFLNCFLSSFPNPVAHLPTDELVSKKKRNKRKPRHLGNADNTAWASMTPQELWRNI
SNEAKSYFSFSMDCESVDQAVELYGLQKISLLREICVKSGIQILLKEYNFDSRHRPTFTE
EDILNIFPVVKHVNPKASDAFHFFQSGQAKVQQGFLKEGCELINEALNLFNNVYGAMHVE
ICACLRLLARLNYIMGDYNEALSNQQKAVLMSERALGVDHPNTIQEYMHLALYCFANGQL
STALKLLYRSRYLLLLVYGEDHPEMALLDSNIGLVLHGVMEHDLALRFLESALAINGKYH
GVKSLKVALSHHLVARVYESKAEFRSALQHEKDGYTIYKNQLGDNHEKTKESSEYLKYLT
QQAVALQRTMNEIYRNGSSSSILPLKFTASPMAGVLEQLNVINGILFIPLSQKDLENLKA
EVQRRQQLQETVKRVEQGETTEEKVTAPHHREKSQTTIESSTEQASA
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacggtttctgcttgctgcagacttttcacaggctttatcctgaggcggcag
ccggaagggttgagcgacgaccgtttgccgctgctgtccgactctcggagagagtgttgc
gtcgcacctcctggcttcaccttcctggttaaaaacgagtccggtgcgtcggaggagcgg
cccgtgcaaggttaccccgacatcgtcttgagcagcgtgatagcgagcaactctgggccg
aagagcgagaggtctccgaggttagacagcgttgcctcgaagaccggggctcctgatagc
gttgagagagattgggctctgtcagaccagaaggacggctgtttaaatagtgggatgtgc
ctggcagctctgaagcgtgcatctcctacatctgatgaccttccctctgcccttgacgag
attccgaaacaggtgaaagatcatggctgccagcctctagtttggcatgtctgtggaaag
tcagaggcctctgcttgctgcacagacaacagattgtgctgcgaagagactcccgtggaa
atagctgacataacagatgtgggagggaaaaacattggcttggagtcatcgagtgaatta
gtgagccacggccaggagtgtgattttgtgcaattagcccggaaagggggtgaacgtttc
aaacttgaaactgaggcaccagagaaccactctaacacggagtctgttaccaaaggtcat
tgtggccatctgataagagatgacgccactgaccccgctccctgtgcgttgcatcaaaga
ccccctgaattattgatggctgccacggtggatccgcgccctgaatgtgcgcaggctgtg
ggaaagcaggtgtgtttagctccggcaagaagtgtcgatagctggaaagagcgtggcaag
ctgccaagccgaggtgctgctggaactccgcccgctagccagccgccaagttcctcgggc
cacctggtcaccgccgaggataacggggccttgagcgggctcggctttcctgaaaatccc
aggaagaagaggaagaaaaagaggcttctgcgttcgttgtcagttggatgtgaagaagcc
cattcgtcgggcatgccgttagtcaatggagatgctgggcacgatcatttggagacggaa
aaccacaaagagagggtcgatgacgagactcgggtggacgatgagaatgagcaagaggtg
atagtcatccaggacacggggttcaccgtcaagatgcacgcccctgggatagagccattc
gacctgcaggtttctccccaggagatggtgcaggaaatccatcaggtcctgatggacagg
gaggacacatgccatcgcacatgcttctctctacagctggatggaaatgttctggacaac
ttctctgaactcaaatccatcgaaggcctgcatgaaggctccaatctgaaagtagtagaa
gagccttacactgtccgtgaagcccgaatacatgtgcgacacatccgagaccttctgaag
agcttggacccatccgattcctacaatggcatagactgcaattccttgtcattcctgagc
atgttcaccgagggagatttgggagagactgggaagcgcaaaaggaaaggctcggagttg
gagcaaattgactgcacgccccctgaacacatcctccccggaagcaaggaacgccctttg
ctcttcctccagccgcagaccaaggagacaaagcccctgcagtgcctgaaagtgttaact
atgagcggctggaatcctccgccaggtaaccgcaagatgcacggcgatttgatgtacctg
tatgtggttaccatggaggatcggcatgttagcatcactgcttcaacccgaggtttctac
gtgaaccagtcgacggcctacatcttcaaccccaagccagcaaaccccagcttcctcagc
cattccctggtggaattgctgagccagactagtcctattttcaaaaagaattttgctacc
ttacaaaagaaaagggttcagcgacacccgtttgaaaggatcgcgactccgttccaagtg
tatagttggactgcacccgtgatggagcacgccatggactgtgttcgcgcagaagatgca
tacacttcacgcttgggatacgaggagcatataccaggccagacaagggactggaatgaa
gaattgcaaacgaccagagagctcccgcgtaagaaccttccggaaaggcttctccgcgag
cgggccattttcaaggtgcacagtgactttgcagcggctgccacacgtggggcaatggcc
gtgatcgatgggaatgtcatggccatcaatcccggagaagaaaccaaaatgcagatgttc
atctggaacaacatcttcttcagcctgggcttcgatgtccgtgaccattacaaggacttt
ggtggggacaatgcagcctacgtggctcccaccaatgacctgaatggagtccgggcctat
aacgcagttgacgtagaaggactttatacactggggactgtggtcgtggactacaggggt
tacagggtgactgcgcagtcgatcattcctgggattctggagagggaacaggagcagagt
gtcatatatgggtccatagactttggtaaaacggttgtgtctcacgccaagtacctggag
ttgttggagaagacggcaaggcctctcaaaatccagaagcacaatgtactcagcgagaag
gacgacgaagtggaactctgctcctccgtcgagtgtaaaggcattattgggaacgacagc
cggcattacatcttggacttgctgcgcaccttcccgccagacttgaatttcctgcctgtg
gaaggcgaagagctcccggaggaatgcagcaagatgggcttcccaaaggaacacagacac
cggttgtcctgtctgaggcaggagctaattgaagccttcgtcgaacaccggtatcttgtt
ttcatgaagttggctgccttgcagctgatgcagcagaaggcgaacaggcaagagaaagat
tgtgctgccatgaccgagaatggtagctcttgtctaaccggggccgtggaaaacaacaaa
actgtgttggaagatggtaaggctgaggaaaacctttctggattagatcaagctagagac
cttgcagagtccattgcgtcagaagacacaacagttgacccaaagagtaaggaggttact
ctgaatgcctacaaagcagttggttccgtcagcaatacatcttttgacattcgcttcaac
ccagatatattttcacccggtgtccgtttccatgatcccgactgtgaggaactccagaaa
cagaaacaattgttgaaagatgcagccgcattcctggtttcctgccagattccgtcattg
ataaaagactgcgttgatcagactgtgcttccgatggatggtgccacgttggcagaagcg
attcatcagcggggcatcaacatccggtacctggctaagatagtgcagttggtgtcaaag
agtcttgctcggcagcagttggaccatattcataaacttggagtgactgagttaatcacc
cgatccgttaaacatatcttcaaaatataccttcagggagtggagctctctggtctgtct
gtcgccataagccatttcctcaactgcttcctcagttctttcccaaaccccgttgctcac
ctccccactgatgagctggtctcaaagaaaaagaggaacaagaggaagccgcgtcacctg
gggaacgccgacaatacagcctgggccagcatgaccccacaggagctctggaggaacatc
agcaatgaggcaaagagctacttcagcttcagtatggactgtgagagtgtggatcaggct
gtggagctgtatggcctacagaaaatcagcctcttgagggaaatctgtgtgaagtcgggg
atacagattttgctgaaggaatacaacttcgacagccgtcaccggccaacctttacagag
gaggatatcctcaacatcttcccagttgtaaaacatgtgaatcccaaagcatctgacgcc
ttccatttcttccaaagtggacaagctaaagtccaacaagggttcttaaaagaggggtgt
gagctcatcaacgaggccttaaatcttttcaataatgtatatggagcaatgcatgtggaa
atctgtgcttgcctgaggctgctggctcgtctaaattacataatgggtgattataatgag
gccctgagcaaccagcagaaggcagtgctgatgagcgaaagagcactaggtgtagatcac
cctaatacaatccaggaatatatgcaccttgcactatactgctttgcaaatggtcaacta
tcaacagccttaaaattactgtaccgctctcgctacctcctgctcttggtgtatggtgag
gatcatccagaaatggcactgttggacagtaacattggccttgtattacacggtgttatg
gagcacgatcttgccctgagattcctggagagtgccctggcaattaatggaaaataccat
ggagtaaaatccctaaaggttgccctgagccaccacctggtagcgcgtgtctacgagagc
aaagcagagtttcgctccgccctacagcacgagaaagatggttacaccatctacaaaaac
cagctgggtgacaatcacgagaagaccaaagaaagctccgagtatttgaagtatctcaca
caacaagctgtagctctccaacgaactatgaatgagatttacaggaatggatccagttcc
agcatcctcccactcaagttcacagcttcgcccatggctggtgtgctggagcagctcaat
gttatcaatggaatcctcttcattcccctcagccaaaaggacctggaaaatctgaaagcg
gaggttcagcgtcggcagcagctgcaggaaacggtgaagcgtgtggagcagggagagacc
acagaggaaaaggtgactgcaccgcatcacagggagaagagccaaactaccatcgagtcg
tccacagaacaggcctcggcgtga
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