Scyliorhinus canicula (smaller spotted catshark): 119975109
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Entry
119975109 CDS
T11175
Symbol
vmp1
Name
(RefSeq) vacuole membrane protein 1 isoform X1
KO
K21248
vacuole membrane protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119975109 (vmp1)
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Motif
Pfam:
VTT_dom
LptF_LptG
MerE
Motif
Other DBs
NCBI-GeneID:
119975109
NCBI-ProteinID:
XP_038670576
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Position
12:156739880..156919290
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AA seq
403 aa
AA seq
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MAGSEKSHELQHHRPRMQKEQQNGNATDVLTLNERKLRDQEERETIVLWRRPIITLQYFL
LETTLDLKESALRLWQRRRFVFATLLLLAVSTIAYSVEGGHQQYVHFVEKKFLWCAYWVG
LGILSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSVNFPEPPYPDKIICPDEKLKETIS
LWAIISKVRLEACMWGAGTAIGELPPYFMARAARLSGTETDEEFEEILERDQSAEDLPTR
AKLAVQNLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIVKMHI
QKLFVIIMFSKHIVEQMVSLIGAIPGLGPSLQKPFREYLEAQKTKLHHKSGDAIEASENW
LSWTFEKVVIIMVCYFILSIVNSMAQSYAKRIQSQKYTEGKMK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctggaagtgaaaaatcgcatgaactgcagcaccaccgcccaaggatgcagaaagaa
caacagaatggtaatgccacagatgtcctgacactgaatgagaggaaactgcgggatcaa
gaggagagggagaccattgttttatggaggagacctatcatcaccctgcagtacttcctc
ttggaaaccactttagacttaaaagaatcggcattaaggttgtggcagcgacgacggttt
gtttttgccaccctgttgttgttggctgtatcaacaattgcctactccgttgaaggcgga
catcagcagtacgtacattttgtggagaagaagtttttgtggtgtgcctactgggtaggc
ttgggcattctgtcttctgttggactaggcacaggccttcacactttcctgctctattta
ggtccacatattgcttcagtgacgttggctgcttatgaatgtaattctgtgaatttccca
gaacctccatacccagataaaatcatttgtcctgatgagaagttgaaagagacgatctct
ctatgggccattatctccaaagtcaggctggaggcctgcatgtggggtgccggtactgca
ataggagagctacctccctacttcatggcccgagcagctcgcctctcaggcacagagaca
gatgaggagtttgaggaaatactggaacgtgatcagagcgcagaggaccttccaacccga
gcgaagctggctgttcagaacctggtgcaaaaagttgggttcttcggaatcttggcctgt
gcttcaattcccaatcccctctttgacctggctggaataacatgtggacacttcctcgtt
ccattctggaccttctttggagcaacacttattggaaaagctattgtgaaaatgcacatc
cagaaactgtttgttattataatgttcagcaagcacatagtggaacagatggtgtccttg
ataggggcaattccaggcttaggcccttcacttcagaaaccctttagagaatatctggag
gctcagaaaaccaagcttcaccacaagtctggagatgcaatagaagcgagtgaaaactgg
ctgtcctggacctttgaaaaagtagtcatcattatggtgtgctatttcattctttccatc
gttaattccatggctcagagctacgccaaacggatccagtcacagaaatacactgaaggg
aaaatgaaatga
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