Scyliorhinus canicula (smaller spotted catshark): 119975165
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Entry
119975165 CDS
T11175
Symbol
pigs
Name
(RefSeq) GPI transamidase component PIG-S isoform X1
KO
K05291
GPI-anchor transamidase subunit S
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
scau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
119975165 (pigs)
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GFIT
Motif
Pfam:
PIG-S
Motif
Other DBs
NCBI-GeneID:
119975165
NCBI-ProteinID:
XP_038670679
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Position
12:161963393..162014593
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AA seq
559 aa
AA seq
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MAAEAAAEERSRGKYSASCITVVVILLGLPLWWKTTETYRASLPYSQINELDILLLDISV
PVEVVFARGTLTTEQQKKLLPQTQFSQKMNQLDDKTGFKYRYEKTYRAATGMEQDAIMGG
NVEVAVVTLSRVYESLAGSVVIYVVPADSQLLPQEVSVYIGKHRAAFLRSPVTGSHSVED
VLQDIDDNVEEILQTMSFTDDMVIAALSNRVPSGMFGTDTFRDSMTAFKSSLGYEITFSL
LNPDPKSHNVCWEIERAVNNYVQPFLDKLSFIANFSVDSQILYYAVLGVTPRFDKTSSSF
SLNEDSLPHVINPVEAKLGSSVASSYPVLNFLLYVPEYSHSPLYIRDSNGSPVESNAFHS
SRWGGIMIYNVDQRQLNETQLPVAVNIDMARVMEVFLSQLRRLLLGIQRVQPLSESLVQS
PGNMVVTDWETDRLLWVRTVENIATATNTLTSLAQLLDEIGNIVINDNIASEVYSAVASV
QRSLQELEAGRLLPAFLASKEAITSSEKAFFDPSLLHLLYFPDDQKFAIYIPLFLPMCVP
IVLSLLKTGKDLKWRKKVD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcggcggcggaagaaaggtcccgaggaaagtactctgccagctgcatc
actgtggtggtgatattgctcgggctgcctctctggtggaagacaacagagacgtatcgt
gcctcgctgccttacagccagatcaatgaactagacattctattgcttgacattagtgtg
cccgtggaagtggtctttgcgagaggcacactgactacagaacaacagaaaaagctactg
ccacagactcagtttagccagaagatgaatcagctggacgataagacagggttcaagtac
aggtatgagaagacatatagagctgctactggtatggaacaagatgccataatgggggga
aatgtggaagtggctgttgtcacactgtcacgggtttacgaaagcttggcaggttcagtg
gtgatctacgttgtgcctgctgattcccagcttctgccacaggaggtctctgtttacatt
gggaaacacagggctgccttcctgcgttccccggtgactggatcgcacagtgtggaggat
gtgcttcaggacattgatgacaatgtggaagagatcctgcaaacaatgtccttcactgat
gacatggtgatcgcagcattgtccaatcgtgttccctcaggaatgtttggcactgacacc
ttcagagacagcatgacagcttttaaatccagtcttggatatgaaatcaccttcagtttg
ttgaatcctgatcccaaatcccacaatgtttgctgggaaattgaacgagccgtgaataat
tatgtgcagcccttcctggacaagctgtcattcatcgctaatttttccgtcgactctcag
atactgtattatgcggttctgggagtaacaccacgcttcgataagacatcttcgagcttt
tctctaaatgaggacagtttgccccatgtaatcaatccggttgaagccaaactagggtcc
agtgttgcttcaagctacccagttttaaatttcctcctttatgttcctgaatactctcat
tctcctctgtacatccgtgacagcaatggatctcctgttgaatcaaacgccttccacagc
tcccgatggggaggaatcatgatttacaacgtggatcagcggcaactaaacgagacccag
ctgccagtcgcggtcaacatagacatggctcgagtgatggaagtgtttctgtcacagctg
cgcaggttactattgggtattcagagagtgcagcccctttctgaatcccttgtccaaagt
cccgggaacatggttgtcactgactgggagactgaccgcttgctgtgggtaaggacagtg
gagaacattgctaccgcaacaaacacgctaacttccttagcccagctcctcgacgagatc
ggaaacatcgtgatcaatgacaacatcgcctctgaggtgtacagcgctgtggcttctgtt
cagcgatcacttcaggagctggaggctgggagactgcttccagctttcttggccagcaaa
gaggccatcacctcgtctgagaaagcctttttcgatccatctctcctccatcttctgtat
ttcccagatgatcagaagtttgccatttacatccccttgtttctgccaatgtgtgtcccc
attgtgctgtccttgttgaagaccggcaaggatcttaaatggcgaaagaaggtggattga
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