Scyliorhinus canicula (smaller spotted catshark): 119975181
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Entry
119975181 CDS
T11175
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119975181
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119975181
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119975181
04121 Ubiquitin system [BR:
scau04121
]
119975181
Enzymes [BR:
scau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119975181
Peptidases and inhibitors [BR:
scau01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119975181
Membrane trafficking [BR:
scau04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
119975181
Ubiquitin system [BR:
scau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119975181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
119975181
NCBI-ProteinID:
XP_038670740
LinkDB
All DBs
Position
1:18726554..18759735
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AA seq
508 aa
AA seq
DB search
MRSGAGARSEAGDRLVREFLQSGATVRNRMMKNWGVIGGIAAALAASIYVLWGPISERKR
RRKGLVPGLLNLGNTCFMNSLVQGLAACPSFIRWLDDFTRRYNLDSPQEERCPYLSVTLL
RLLRVLSNGEETAEDVVDAGSLLEVLRMYKWQMSSFEEQDAHELFHILTAALEDERDRQP
RVAHLFDVRSLEAPPESEEKQLSCRSRGPLLPPPSPWKSQHPFHGRLTSNMVCKRCEQQS
PVRYDTFDSLSLSIPTVTWGRPVTLDLCLQHFISSESIKDVMCENCTKEGETLNGETAEN
QRTTFIKQLKIGKLPQCLCIHLQRLSWSNRGTPLKRNEHVQFSELLSLDTYKYRSPSQRS
GHRRMSRPASTGSLPRMLEETKTGFMQPSLSKMQVANGACASSLLSASFATSPSPVTRSY
ATSMYLFRLMSVVVHHGDIHSGHFVTYRRSPSTSKNPAVVSNQWLWISDDTVRRANTQEV
LASNAYLLFYERVRPLVRRASREFGSEE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcggagccggggcccggtcggaggctggtgacaggctggtccgggagttcctg
cagagcggggcgactgtgaggaatagaatgatgaagaactggggtgttatcggaggaata
gctgcagctttagcagccagcatctacgtactgtggggaccaatcagtgaaagaaagaga
cgcaggaaaggcctagttccaggcctcttgaacctgggaaacacctgctttatgaactcc
ctggtccaggggctggctgcttgtccgtccttcatccgttggctcgatgatttcaccagg
cgttacaatctggatagtccccaggaagagcgttgtccgtatctctctgtcacgcttctc
cgattactccgagtattatccaatggggaagagactgcagaggatgtggtggatgcagga
agtctcctggaagtcttgaggatgtacaaatggcaaatgtcttcatttgaagaacaggac
gctcatgaattgttccacattctcactgccgccctggaggatgagagagatcgccagcct
cgagttgcacatttattcgacgttcgatctctggaggctccaccagaatcggaggaaaaa
cagctgagctgcaggagtcgagggcctttgctgccaccaccaagtccctggaagtcccag
cacccgttccacggccgactgaccagtaacatggtgtgcaaacggtgcgagcaacagagt
cctgtgaggtatgacacatttgacagcctctccctcagcattccgacagtcacatggggc
agacctgtgacactggacctctgcctccaacacttcatctcatcagagtccattaaagat
gtgatgtgtgaaaactgtaccaaggaaggggaaacgctgaacggagagactgcggaaaac
caaaggacaaccttcatcaaacagcttaaaattggaaagctcccgcagtgcctgtgtatc
cacctgcagaggctctcgtggtccaaccgtggaacccccctgaaacgcaatgagcacgtg
cagttcagcgagctcctctcgcttgatacctacaagtaccggagtccatctcagaggtcg
ggccaccgcagaatgagcaggcccgccagtacagggagtttaccacgtatgctagaggag
accaagacaggattcatgcagcccagtctgagtaaaatgcaagttgcaaacggagcatgt
gcatcatctctgctatccgcttcttttgcaacctctccgtctcctgtaactcgaagttac
gccacgtcgatgtatttgttccgactgatgtctgtggttgtccatcatggtgacatacac
tcgggccacttcgtgacctaccgccgttcgccgtccacctcgaagaacccggcggtggtg
agcaaccagtggctgtggatatcggacgacacggtgcgcagagccaacacgcaggaagta
ctcgcctccaacgcttacttgctcttctacgagcgggttcggcccctggtgaggcgggcg
agccgggagtttgggtcggaggagtga
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