Scyliorhinus canicula (smaller spotted catshark): 119975193
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Entry
119975193 CDS
T11175
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119975193 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scau01009
]
119975193 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119975193 (ncor1)
Protein phosphatases and associated proteins [BR:
scau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119975193 (ncor1)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
119975193 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
119975193
NCBI-ProteinID:
XP_038670727
LinkDB
All DBs
Position
12:complement(164049852..164406082)
Genome browser
AA seq
2502 aa
AA seq
DB search
MTDCPKMSSSGYPPGQGPFGAEANRYPGHAIQYTFSNSRHQQKHLNPGTCNNHSCPCSTH
VSEIATTSRSQEFAVPDYRPHLQESQLLQHQQLRRRPSLLSEFHPASERPQERRSGYEQS
YHSVAGQPDHDSLESKRPRLEQEAFSMKADVPSSPTTNQQAGDEQDSSPSKLSKEELIQS
MDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEPKHRSIVQIIYDENR
KKAEEAHKILEGLGPRVELPLYNQPSDTKIYHENIKTNQVMRKKLILFFKRRNHARKQRE
QKICQRYDQLMEVWEKKVERIENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRQNQ
STSLLAQICRNHRVGQRGAGLPATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMY
DIEQRRVKFLNMNGVMDDPMRVYKERQFINVWSEHEKEIFKEKFVQHPKNFGLIASYLER
KCVADCVLYYYLTKKNENYKNLVRRNYGRRRGRNTQQISRPSQEEKEAEKEEEKIEKVEK
EEKDEKKEEEKDDKEEPQRSENWLELLSERETIKEKDKPDTAGEEPEEKEQSAPRGRKTA
NSQGRRKGRILRSMAKEAITEEPPNPPPPPELAVEPVETSRWTEEEMEVAKKGLVEHGRN
WAAIAKMVGTKSEAQCKNFYFNYKRRHNLDMLLQQHKLRVQQMSRRSREDREVSQCESIA
STVSAQEDEDNEVSNEEENPEDSEGAENSSDTESAPSPSPMETGKSSKESTEANRLTEEE
NPASKDAPTIQSVSPAPTAPSPELQVKQEINLGFEESMEGQRGVDAEAKPVFEPLLKTKT
EPVDVNMKPEENLQVKEEVDAKDKEFEKTRQQGIMGTELLNLAQPGVQMESHSDNDSSAT
CSADEVEDGEPDRQRMFSPEPKPSLLKAHSSVLMTSALKPVPMDMQQLQQRAAMIPNMMA
APYVHTNAPVSGLALFQRHIKAMHDSALQEEQMRQRQEHFEAERRNSASPSISGKSCAIL
DKEGKPFAYMPYHEARRVMEQESQSAGARSSSPYRLSPRESCKLSPQPEMNTLRYSVPPV
LQPAPHQVMHPTSEGGKLVITRPARPSNIPSPPPLIPSTKPPLSTEKPSFNMGGSISQQY
MGAAICQSRLQVTSGTYLPPHSQVSYSQETVKNTVGSISLGLPRQQEPAKPGPLPYIKQE
ELSPRSQNPQPEGLLCRAAYETNVVRGGSMANMQEAGLTRSSPASKVSAEPPSYRGSITQ
GTPGLSQQGLVADTLKGAISKLPIEESGSPEQTREEAISKGHVIYESKSGHILSYDTMKN
IREGTRSPRTGHEVHGVKRTYDLMESGLSRVPVREPTVSAPYEGLISRARESPHLSESKD
RVVPSGSIMQGTPRASNETFEEGMKYSKQIKRESPPLRTFEGSITKGKPYEGVTTIKEMG
RSIHEIPRQESRKTPEIVQNSRSIVEGSISQGTPVKHESQSAIKHDVKSLITASSKHPHP
MHQLEMISEGVKVMERKYEDMKPADQLRSRHSAVVSSATSVLRSTMHEASKSQLSPVLFE
DPSARRTPLGYHSFIPRGPPIVSRAQEGVMTSGKSTGHERKSTLVAAQRENMSVKSPVSV
VDPSATLSPYDSLHGRVNPDYRSHVPHPFEQTMAFHRALDPAYLFPRQLSPNPSYSSHYQ
LYAMENTRQTILNDYITSQQMQVITKPDAARGMSPRDTLGVPYPTGSRAIIELGPVSHTI
LVPGGSSTPPMDRITYIPGNQAPYPGRYNHSPMSPGHPAHMSASTANAEREREKEREREQ
REREQRERERLAVTTCDLSYLRAGPDQSSRPSSHGYVRSPSPSVRAQETILQQRPSIFQG
ANGKGVITSLDAATQSRIMQVPQSALAMAQGLSASRYNTAADALAALVDAAASAPQIEMT
KGKENKHEAPRVEEMTARRVCEQQQNVHQHQAQQQPQTEHERRSVQSPYSTSAKGQGPSG
YPEIIKDKAAPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKDSRERGSHSSDSSS
SVSSHRYDMPSAEAIEVISPANSPAQEKLEPAQQEVHKPSQGDGEPNTRGFDVSMGRYRM
LQKSPSPQLQQQQQLQQPPSQPDSVYSSAPNPQVSKTHKLITLADHIHHIITQDFARNQS
NSPSSQPPPVSTFQTSPVVSNRGKGSAHYSTDSQPQTTQTTLHQRPPSRVSPENPTEKGR
GRPGKSPERSHVSSEPYEPISPPQVPANLEKQESVVQPPQRREAEPTEQRLPPSNEWLPM
PLLVRRGRGADSATRSEARSPGNVGYLPAFFTKLENTSPMVKSKKQEIFRKLNSSGGGDS
DIANAQPGTEIFNLPAVTSSGVVSYKKGSVSSRSHSFADPASNLGLEDIIRKALMGKYDD
KGDDHQVVLPHPANASQANMSTAIPVSGDARNEEANPSPPSGSTAFPYNPFTMRMMSVTP
TSIACAPPTMGQASSHPPARTWEREPAPLLSSQYETLSDSDD
NT seq
7509 nt
NT seq
+upstream
nt +downstream
nt
atgactgattgtccaaaaatgtcaagttcaggttaccccccaggtcaaggcccctttggt
gcagaagctaaccgatacccaggtcacgccattcagtataccttctccaacagcaggcac
cagcagaaacatctaaatcctggaacctgcaacaaccattcctgtccctgctctacccat
gtctccgaaatcgccacaacatcgagatcccaggaatttgcagttccagattatcgacct
caccttcaggagtcgcagctcttacagcatcagcagctgcggagacgcccgtcgcttctt
tccgagttccatccagcctctgaaaggcctcaagaaaggagaagtggctatgagcagtca
taccatagcgtggctggacagcccgatcatgattcactggaatccaaacgtcctcggctt
gaacaggaggctttttcaatgaaggctgatgttccatcgtcaccgacgactaaccagcag
gctggagatgaacaagattcatccccttctaaactatccaaagaggagctcatccagagc
atggaccgtgtagaccgagaaatagccaaagtggagcagcagatcctcaaactgaagaaa
aaacagcaacaacttgaagaggaagcagcgaaacctccagagcctgagaaaccagtctcc
cctcctccagtcgaaccaaaacatcgcagtatcgttcagattatctacgatgaaaacagg
aaaaaagcagaggaagctcacaaaatacttgaaggtctgggtccaagagtggagctgcca
ctttacaaccagccatctgatacgaagatttatcatgaaaacatcaaaacgaatcaagtc
atgcggaaaaaactgatcctttttttcaagaggagaaaccacgctcgtaaacagagggag
cagaagatctgccagcgttatgaccagctaatggaggtgtgggaaaagaaggttgaaaga
atagaaaacaaccctcgccgcaaggccaaggagagcaagaccagggaatattatgagaaa
cagttccctgaaatccgcaagcaaagagaacagcaagaacgctttcaacgacagaaccaa
agtacgtctctgttggctcagatttgcagaaaccatagggttggacagaggggagctggg
cttccagcaactatagccaggagcgagcatgagatttctgaaatcatcgatggactttct
gaacaggagaataatgagaagcagatgaggcagctttctgtgatacctccaatgatgtac
gacatagaacagcggcgggtgaaattcttgaacatgaatggggtaatggacgatcccatg
agggtttacaaggaacgacagttcataaacgtctggtctgagcatgagaaggagatcttc
aaagagaagtttgtgcaacacccaaaaaactttggcttgatagcgtcttacctggagaga
aagtgtgtagcagattgcgttctgtattattatttgaccaagaaaaatgagaactacaag
aatcttgtgaggaggaactacggacggcgcagagggaggaatacgcaacagatttctcgc
ccttcacaagaagaaaaagaagctgagaaagaagaggagaaaatcgagaaagtagagaaa
gaagaaaaggacgagaagaaggaagaggagaaagatgataaggaggaacctcaaaggtca
gaaaactggctggagctgctctctgaaagggaaactatcaaggaaaaggacaaaccagat
actgcaggagaggagcctgaagaaaaagaacagtctgctccacgagggagaaaaactgca
aacagtcaggggaggcggaaaggcaggatcctgagatctatggcaaaagaagccattact
gaggagccacccaatcccccacctccgcctgaacttgctgtggagcctgtggagacttcc
cgttggacagaggaagaaatggaagtggccaaaaaaggactcgtggaacatggacggaac
tgggcagctattgccaagatggtgggcaccaaaagcgaagcacagtgcaagaatttctac
ttcaactacaagaggcggcacaaccttgacatgctgctgcaacaacacaaacttagagtg
caacagatgtcacggagatcacgtgaagatcgggaagtatcacaatgtgaaagcattgct
tcaacagtgtctgcacaagaagatgaggataatgaagtgtccaatgaagaggagaatcca
gaggacagtgaaggagctgagaacagctcagatactgagagtgcaccttcaccatcgcct
atggagacagggaagtcgagtaaggaaagtacggaggctaaccggttaactgaagaagag
aatcctgccagtaaggatgctccaactatacagtctgtctcaccagcacccactgctccc
tcacctgaactgcaggtcaagcaggagataaacttgggctttgaggagtcaatggagggg
caaaggggagttgatgctgaagcaaagcctgtgtttgaacctctgctgaagaccaaaact
gagcctgtggatgtgaatatgaagccagaagaaaatctgcaggttaaagaggaggtggat
gccaaagacaaagagtttgagaaaaccaggcagcagggaataatgggaacagagctgctc
aatctggcgcagcctggagtacagatggagtctcattcggacaatgattccagtgcaacc
tgcagtgcggatgaagtggaagatggagagcctgacaggcaaagaatgttttctccggaa
ccaaagccatcactgctgaaagctcacagctcggtgttgatgacctcggccctgaagccc
gttccaatggatatgcagcaactgcagcaacgtgcggccatgattcccaacatgatggct
gctccctatgttcataccaatgctcctgtgagtggcctagctctattccagcggcacatc
aaagccatgcatgattctgcactgcaagaggagcagatgcgacagaggcaagaacatttt
gaagctgagcgcagaaattctgccagtcccagtatcagtggcaagagctgtgcgatctta
gacaaagaaggtaaaccatttgcttacatgccgtatcatgaggctcggcgtgtgatggag
caggaatcacagtcagcgggagccagatcctcatcaccttacaggctgtccccaagggaa
tcctgtaaactttccccgcaaccagagatgaatactttgcgatacagtgttccaccagtt
ctccagcctgctccacatcaagtgatgcaccccacatctgagggaggaaaactggtgatt
accagaccagctagaccttccaacattccctcgcctcctcccctcatcccttcaacaaaa
ccaccgctgtctactgagaaaccatcattcaacatgggaggctctatctcacaacagtac
atgggagcagcgatctgccagagtcgcttacaggtaacgtctggtacatatctaccccct
cacagccaagtatcttacagccaagaaactgtgaaaaacacagtgggttccatctctctt
gggctgccacggcaacaggaacctgcaaaacctggtccattaccgtacattaaacaagag
gagctctctcccagaagccagaatccacagccggagggtctgctctgcagggctgcgtat
gagacaaacgtggtcagaggtggttcaatggcaaatatgcaggaagccggtctaacacgt
agcagcccagcaagcaaggtttctgcagaaccaccttcctatcgaggttccattactcag
ggcactccaggcctatcacagcaaggccttgttgcagacacattgaaaggagcaatcagc
aaactacccattgaggaatcaggcagccccgagcagacccgggaagaggcaatatcaaaa
ggccacgtcatctacgaaagtaagagtggtcatatactctcatatgatactatgaaaaat
atacgcgagggaaccagaagtcccagaacaggccatgaggtccacggcgtcaagcggacc
tatgacctgatggaaagtggattaagtcgagtgccagtgcgtgaacctacggtgtctgca
ccttatgaaggcctcatcagccgtgcaagggaaagtccacatttatcagaatccaaagac
agggtggtgccatccgggtcaataatgcaaggtacaccaagagcctccaatgagacgttt
gaggaaggcatgaagtacagtaaacagattaaacgggaaagcccaccactgaggacgttc
gagggatccatcacgaaaggcaagccttatgagggagtcaccaccattaaagagatgggt
cgctccatccacgaaattcccagacaagaaagtcggaaaaccccagaaatcgtacagaac
agccgatcgatcgtggagggatccatctctcagggaaccccagtgaagcacgagagccag
tctgctattaaacatgatgtaaagtctctgatcacagcatccagtaaacacccacacccc
atgcaccagctggagatgatctcggagggtgtaaaggtcatggaaaggaaatatgaagac
atgaagcctgctgaccagttaaggagccgccacagtgctgtggtcagttctgcaacatcg
gtgctcaggtcaacgatgcacgaagcttcgaaatctcagctgagcccggtcctctttgaa
gatcccagtgcaaggaggaccccactgggatatcatagctttattcccaggggcccacca
atagtcagcagagcacaagaaggtgttatgacttcagggaagtccactggccacgaaagg
aagagcacgttggtcgcagcacagagagagaacatgtctgttaagtccccggtctctgtg
gtggatccatctgcaactctcagtccttacgactctctccatggacgagtgaaccctgac
tatagaagccatgtacctcaccccttcgagcagacaatggctttccaccgagcattagac
ccagcttacctgtttccccgtcaactttctcccaatcccagttactcaagtcactatcag
ctgtacgcaatggagaatacacgacagaccatcctcaacgactatatcacttcccaacaa
atgcaagtgatcactaagccagatgctgcaaggggaatgtcgccacgtgacactttaggt
gtcccttatcctactggatccagagcaatcatcgaattggggccagtgtcgcatacgata
ctagtgccaggcgggagcagtacccctcctatggacagaataacctacatcccagggaac
caagctccttacccaggcagatacaaccattcccctatgtcaccaggtcatcctgcgcat
atgtctgcctccacagctaatgcagagagagagagggagaaagaacgagagagagaacag
agggaacgagaacagagggaaagggagagattggccgttacaacttgtgatctgtcttac
ctcagagcaggtcccgaccagtccagtagaccaagtagccatggttatgtccgttcccca
tcgccatcagtacgagctcaggagacaatcttacagcagcgacccagtatattccaggga
gccaatggcaagggcgttataacttcgttggatgcagctacgcagtctcgcataatgcag
gtgccacagagcgccctggccatggcacagggactctctgcctcccgctacaacactgca
gcagatgcccttgcagcattggtggatgctgccgcctctgcgcctcagatcgagatgaca
aaaggtaaagagaacaaacacgaagccccccgggtggaagaaatgacagctcgcagggtg
tgtgaacaacagcagaatgttcatcagcaccaggcacaacagcagccacagactgaacat
gagcgacggtcagtgcagtcaccatattcaacctcggccaagggccagggtccgtctgga
tatccagagattattaaggacaaagcagcacccccaaaatccaggtacgaggaggagctg
aggacccgaggcaagaccacaataacagcagcaaattttatagatgtgatcatcaccaga
cagattgcgtctgataaagacagccgggaaagaggatctcacagctcagattcctccagc
agcgtatcttcccatcgctatgacatgcccagtgcagaagctattgaggtaatcagccca
gcaaactcgcctgcacaggagaaacttgaacctgcccagcaggaagtgcacaaaccctcc
cagggagacggtgaacctaacactcgagggtttgatgtgtccatgggtcggtacaggatg
ttgcagaagtcaccatctccgcagctgcaacagcagcagcagctgcagcagccaccttcc
cagcctgacagtgtgtattcctctgctcctaatcctcaagtttccaaaacacacaaattg
atcaccctcgctgatcacatccatcacattattacacaggattttgctcgaaatcagtcc
aacagtccttcgtcacagccacctccagtgtccacattccaaacatccccagtggtctca
aaccgagggaagggttctgctcattacagcacagactctcagccacagaccacacaaact
actctacatcagaggccaccatccagggtctcgcctgagaacccaactgaaaaaggcaga
ggacggcctgggaaatccccagaacgaagccacgtttcatcagaaccatatgagcctatc
tcacctccccaagtccctgccaatctagagaagcaagagagtgtagtccaacctcctcaa
cgaagggaggcggagcccactgaacagaggctgcccccaagtaatgagtggctcccgatg
cctttgcttgtccgaagaggtcgtggtgcagattctgctacaaggagtgaggcacgatct
ccaggcaatgtgggctatttgccggcattcttcactaagctggagaacacttcgccaatg
gtgaagtcaaagaagcaggagatatttcgtaagttgaactcctctggtggcggggattct
gacattgctaatgctcagcctgggaccgagatatttaacttgcccgcagtcacatcatca
ggtgtggtttcgtacaaaaaaggttcagtcagttctcggagtcattcctttgccgatcca
gccagtaaccttggcctcgaggacattatcaggaaagccttaatggggaagtacgatgac
aaaggagatgatcaccaagtggttctaccccatcctgcgaatgcatcacaggccaacatg
agcacagccatccccgtgtctggtgatgctcgtaatgaggaagccaatccatcacctcca
tcaggctcgactgcgtttccttataatccattcacgatgcgcatgatgagtgttacaccg
acgtccatcgcctgtgcaccgccaacaatgggtcaagccagctcacatccaccagccaga
acgtgggagcgggagccagctcccttactgtcctcccagtatgagacactatcagacagt
gatgactga
DBGET
integrated database retrieval system
