Scyliorhinus canicula (smaller spotted catshark): 119975196
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Entry
119975196 CDS
T11175
Symbol
ubb
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03320
PPAR signaling pathway
scau04120
Ubiquitin mediated proteolysis
scau04137
Mitophagy - animal
scau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119975196 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119975196 (ubb)
04137 Mitophagy - animal
119975196 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
119975196 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119975196 (ubb)
Ubiquitin system [BR:
scau04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
119975196 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
119975196
NCBI-ProteinID:
XP_038670734
LinkDB
All DBs
Position
12:164602029..164605421
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AA seq
761 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEE
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctgactggtaagaccatcacccttgaagttgagccaagt
gacacaatagagaatgtcaaggccaagattcaggacaaagaaggtattcctcctgaccaa
cagcgtctgatatttgctgggaagcagctggaagatggtcgcaccctatctgactataat
atccagaaggaatccaccttgcacttggtcctgcggctccgtggtggaatgcagatcttt
gtgaagaccctgactggtaagaccatcacccttgaagttgagccaagtgacacaatagaa
aatgtcaaggccaaaattcaggacaaggaaggcatccctcctgaccaacagcgtctgata
tttgctgggaagcagctggaagatggtcgcaccctatctgactataatatccagaaggaa
tccaccttgcacttggtcctgcggctccgtggtggaatgcagatctttgtgaagacactg
actggtaagaccatcacccttgaagttgagccaagtgacacaatagagaatgtcaaggcc
aagattcaggacaaggaaggcatccctcctgaccagcagcgtctgatctttgctgggaag
cagctggaagaaggccgcaccctttcagactacaatattcagaaggaatccaccttgcac
ttggtcctgcggctccgtggtggaatgcagatctttgtgaagaccctgactggtaagacc
atcacccttgaagttgaaccaagtgacacaatagaaaatgtcaaagccaagattcaggac
aaagaaggtatccctcctgaccagcagcgtctgatctttgctgggaagcagctggaagat
ggtcgcactctgtctgactacaatattcagaaggaatccaccttgcacttggtcctgcgg
ctccgtggtggaatgcagatctttgtgaagaccctgactggtaagaccatcacccttgaa
gttgagccaagtgacacaatagaaaatgtcaaggccaagattcaggacaaggaaggtatc
ccacctgaccagcagcgactgatctttgctgggaagcagctggaagatggtcgcacccta
tctgactataatatccagaaggaatccaccttgcacttggtcctgcggctccgtggtgga
atgcagatctttgtgaagaccctgactggtaagaccatcacccttgaagttgagccaagt
gacacaatagaaaatgtcaaggccaaaattcaggacaaagaaggtatccctcctgaccag
cagcgtctgatctttgctgggaagcagctggaagaaggccgcaccctttccgactacaat
attcagaaggaatccaccttgcacttggtcctgcggctccgtggtggaatgcagatcttt
gtgaagaccctgactggtaagaccatcacccttgaagttgagccaagtgacacaatagag
aatgtcaaggccaagattcaggacaaggaaggtatccctcctgaccagcagcgtctgatc
tttgcagggaagcagctggaagatggtcgcactctgtctgactacaatattcagaaggaa
tccaccttgcacttggtcctgcggctccgtggtggaatgcagatctttgtgaagaccctg
actggtaagaccatcacccttgaagttgagccaagtgacacaatagaaaatgtcaaggcc
aagattcaggacaaagaaggtatccctcctgaccaacagcgtctgatatttgctgggaag
cagctggaagatggtcgcaccctatctgactataatattcagaaggaatccaccttgcac
ttggtcctgcggctccgtggtggaatgcagatctttgtgaagaccctgactggtaagacc
atcacccttgaagttgagccaagtgacacaatagaaaatgtcaaggccaagattcaggac
aaagaaggtatccctcctgaccagcagcgtctgatctttgctgggaagcagctggaagaa
ggccgcaccctttccgactacaatattcagaaagaatccaccttgcacttggtcctgcgg
ctccgtggtggaatgcagatctttgtgaagaccctgactggtaagaccatcacccttgaa
gttgagccaagtgacacaatagagaatgtcaaggccaagattcaggacaaggaaggtatc
cctcctgaccagcagcgtctgatctttgctgggaagcagctggaagaaggccgcaccctt
tcagactacaatattcagaaggaatccaccttgcacttggtcctgcggctccgtggtgga
cagtaa
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integrated database retrieval system
