Scyliorhinus canicula (smaller spotted catshark): 119975224
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Entry
119975224 CDS
T11175
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119975224 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scau03400
]
119975224 (fanci)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
119975224 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
119975224
NCBI-ProteinID:
XP_038670778
LinkDB
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Position
12:complement(17110459..17193016)
Genome browser
AA seq
1342 aa
AA seq
DB search
MDQKILDLATAEDLQGLQQFLQHTKEQEVGALITRHALKGKEIGMLVRAIFKGSPCFQTE
GVCRRLFVYKHCMQLIESGDLQSDIATEIIGLLMLEAHQLPGATLAELANLFVDAIKGGS
TISGKSLDLFPTILTALASQEILNYGGGQLKGSEYKKQLINTLCSSRWDPKCVIHLTSMF
RDVVLSTEELQFVMVKVLQMFPKLDLEELPPLIYQLLLLSSKGCKKTLLEGIITFFHQQD
QLQKEEQTETESMELEAATMPQDQLRHVEGTIILHIVFAIKLDCNLGREFIKYLKFGQQG
DTSRVLCSFNIALMLSVARIHRFEEQVFDFLKTVIIKSFKDAQFQQNSKFLQDLIPGQCN
VSEMILETVSNSVFGWDHVTESLVQLGFIFMDTFGPKAGLFGKVAGTNPSSAKTPAQQTC
KLGAKILLETFKVHEPIRSEILEQVLNRVLTKTTSSINHYIDLLSDIVTSAPLVLLDSSS
KVIEAFDHLSYLPLSTVQGLLKAVQPLLKVSMSMKDSLILVLRKAMFSSHLDSRKSAVAG
FLLLLKNFKVLGSLASSQCTQSLTASQVQVDVHMRYNASANEALCLEILGSLRRCLSQQV
DVRLMLYEGLFDVLRRNSQLADTILQMLLSQLKRYYEAEEDLLPPLKLEGCITSQGGQIY
LHEPLAHLLCCIQNCLAWYQQSLSHCHRGDGGSDDDDGSFQHDLEEQLDTITRRMIKSEL
EDFELDKSADFSLISNVGNKNNIYATLVMGVYEVLMEHNFITGNYSVNRFEDVISLFNRY
RKLSDLLKEKSRKGKSPSSSKAARSLLSFSFVSCLLTALFRDNTQSHGESLAVLRSSNEF
MRYAVSVALQKIQQLEETGQTDGPDGQNTEKTFKHLCEVTRVLLWRYTSIPSAVEESGKK
EKGRTISLLCLEGLLRIFNTVQHRYLNKIQQFLSAVDLVSDEEGEKENINITEKSAFHIR
QFQRSLVTQLSGDEEDFNSKEAQLLVSILSTLSRLLEPTSEQFGQMLTWTVKICKENNLE
DMHFCKGLMSMMFSLHVLRKSPVSLLQEMCRDIHSCLGDIDQDVEIEEQSHFAMVNSKTA
APTVVQLVLSQMEKVLDEIDWLITKMKGQLSSAKELTDENSQASTAREPVEKAIVLQLGT
VLTAFHELIQTSLPAGSCVDILLKDLVKMYNVLTSLVKYYIQGYTGHVAHLPARFEKLVK
LSGSHLTPQCYAFITYVQNVQSVTMSFGGGAGKKKDKRKMMAANTAAMARVLRETKPIPN
MIFAIEQYEKFLIHLTKKSKVNLMQYMKLSTARDFRINAATLDAALQEQEAEEIQDLADD
QSNITVDENQENREPKKKKRKR
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaagattttggatttggcaacagctgaagatctgcaaggattgcagcagttc
ctgcaacacacaaaagagcaggaggttggtgccctgataacacgtcatgctttgaaagga
aaggagatcgggatgcttgtgagagctatttttaaaggttccccatgttttcagactgaa
ggagtttgtcggaggcttttcgtttacaaacactgcatgcaacttattgaatcgggagac
ctccaatcagatatagcaacagaaattattggtttgctgatgctcgaggctcatcaactg
cccggagccaccttagctgagctggcaaacctgtttgtggatgccatcaaagggggcagt
actatcagtggcaaatcgctggatctttttcctacgatacttactgctctggcctctcaa
gaaatcttgaattatggtggcggtcaattgaaaggcagcgaatacaagaagcaattaatc
aacaccctatgctccagcaggtgggatccaaaatgtgtgattcacctcacatcaatgttc
agggatgtagtgctcagtacagaggaacttcagtttgttatggtaaaagtgctacagatg
ttccccaaattggacttggaggaactgcccccacttatttaccagttactcctcctctcc
tctaagggttgtaagaaaactcttttggaagggatcataacattctttcatcaacaggat
cagctgcagaaggaggaacagacagaaactgagtctatggagttggaggctgccactatg
ccacaggatcagcttcggcatgtagaaggaacaatcattcttcatattgtgtttgctatc
aagttggactgtaatctgggccgtgagttcatcaaatatctgaagtttggtcagcagggg
gacaccagccgggttctctgctcttttaacattgcattgatgctctcagtagctaggata
catcgatttgaggagcaggtatttgactttctaaaaaccgtgatcataaaaagttttaaa
gatgcgcagtttcagcaaaattctaaatttcttcaggacttgatccctggtcaatgtaat
gtgtctgaaatgattttggagactgtgtcaaacagtgtttttggctgggaccatgttact
gaatcgctggtacagctgggatttatattcatggacacttttggaccaaaggcaggtttg
tttgggaaagttgctgggaccaacccaagttctgcaaaaactccagcgcaacagacttgc
aaactgggagccaagatccttcttgaaacattcaaagtgcatgagccaattagaagtgaa
atcttggagcaagttctgaacagggtgctgacaaagaccacgtcatccatcaatcactac
atcgacttgctatctgatattgtcacttctgcacctctggttctcctggactcttcctcc
aaggtcatagaggcatttgaccacttgtcctatctaccccttagcacagtccaaggatta
ctaaaggcagtgcagcccctgctgaaggtcagcatgtccatgaaggattcgttaattctg
gtcctccggaaagccatgttttccagccacttggactcccggaagtcagcagttgcaggc
tttctcctattgttgaagaactttaaagtgttggggagcctagcttccagtcagtgcact
caatcgctcacggccagccaggtgcaagtggatgtgcatatgcgttacaatgcctctgct
aatgaagccctttgtttggagatcttaggcagcctgaggcgctgtcttagccagcaagtt
gatgttagactcatgctctatgagggcttatttgatgttctgcgtcgaaattcacaactg
gcagataccatcttacaaatgctgctttcacagctaaagcgatattatgaagcagaggag
gacctgctgccacctctcaagctggaaggttgcatcacctctcagggaggccagatctac
ctccatgaaccactggcgcaccttctgtgttgtatccagaactgtttggcctggtatcaa
cagtccttatcgcattgccatcgtggtgatggcggcagtgatgatgatgacggcagtttt
cagcatgatttggaggaacaactggacacaatcactcgcaggatgattaagagtgaattg
gaagactttgaactggacaaatcagcagacttttcattaatttccaacgttggcaataaa
aataacatctatgccaccctggtaatgggagtgtatgaggttctgatggaacataatttc
ataactggcaactacagtgtgaacagatttgaagatgttatcagccttttcaaccgttac
cgcaagctttcggaccttctgaaagagaaatctcggaaaggcaaatcaccctcatccagt
aaagcagccaggagtcttctaagcttcagttttgtctcctgcttactgactgcacttttt
agagataatacacagagccacggagagagcttggctgtgctgcgctccagtaacgagttt
atgcgttacgcagttagcgtggccttgcagaaaatacagcaactcgaagagacaggacag
acagatggaccagacggccaaaatactgagaaaaccttcaaacatctgtgtgaggtcact
cgggttttgctgtggagatacacttcgatcccatcagcagtggaagagtctggcaagaaa
gagaaaggaaggactatttcgttgctctgtttggagggattactgcgcatatttaacaca
gtgcaacacaggtacctgaacaagatccagcagttcctcagtgcagtagatctggtgagt
gacgaggaaggagaaaaagagaacatcaacattacagagaaatcagctttccatatcaga
cagttccagagatcccttgtgacacagctgagtggggatgaagaggattttaacagcaaa
gaagcacagcttttagtgagcatactgtcaacactctctcggctattagaacccacatct
gaacaatttggccaaatgttaacttggactgtaaagatttgcaaggaaaataacctagaa
gatatgcatttctgcaagggattgatgagtatgatgttcagtctgcatgtgctgcgcaag
tctccagtgagcttattacaagaaatgtgccgagatatccacagttgccttggggatatt
gatcaggacgttgaaatagaggaacaatcccattttgccatggtgaactcaaagactgca
gctccaactgtggtgcagctggttttaagccaaatggagaaggttctagatgaaatagac
tggctgatcacaaagatgaagggccagctcagctctgccaaagaactgacagatgagaac
agtcaagcatcaactgcaagagaacctgtggagaaagctattgtccttcaactgggcacc
gtgctgacggctttccatgagctgatccaaacgtcccttccagctgggagctgtgtagac
attctcctgaaagacctagtcaaaatgtacaacgttctcacctcattggtgaaatattat
atccagggttacaccgggcatgtggcacatcttcctgcaagatttgagaagctggttaag
ctttcgggatcacacttgaccccacagtgctacgcattcataacctatgttcagaatgtc
cagagtgtgacaatgagttttggaggaggtgcaggaaagaaaaaagacaagaggaagatg
atggcagccaacactgcagcaatggcccgggtactccgtgaaactaagccaatacccaac
atgatatttgccattgagcaatatgagaaatttctgattcatcttaccaagaaatcaaag
gtgaacttaatgcaatacatgaagctcagcacagcaagagatttcaggattaatgcagcc
acattggacgcagcactccaggaacaggaagcggaggaaatccaggatttagcagatgat
cagtcaaatatcactgtcgatgaaaaccaagaaaacagagaaccaaagaagaaaaagaga
aaaagatga
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