KEGG   Scyliorhinus canicula (smaller spotted catshark): 119975356
Entry
119975356         CDS       T11175                                 
Symbol
riox1
Name
(RefSeq) ribosomal oxygenase 1
  KO
K16914  protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:scau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:scau03009]
    119975356 (riox1)
   03036 Chromosome and associated proteins [BR:scau03036]
    119975356 (riox1)
Enzymes [BR:scau01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     119975356 (riox1)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     119975356 (riox1)
    1.14.11.79  protein-L-histidine (3S)-3-hydroxylase
     119975356 (riox1)
Ribosome biogenesis [BR:scau03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    119975356 (riox1)
Chromosome and associated proteins [BR:scau03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119975356 (riox1)
SSDB
Motif
Pfam: RIOX1_C_WH JmjC_2 Cupin_8 Cupin_2 Cupin_1
Other DBs
NCBI-GeneID: 119975356
NCBI-ProteinID: XP_038670931
LinkDB
Position
1:290432376..290481874
AA seq 617 aa
MANRRVSAFSVYRSLTAENGNGLSQQTDEHSNKMSQEKQKRSLHLSRRSKIIKRKQKYLK
VKMESLVDIHIVNNAEILQRTNECAEKEPTGPHVKTKINGKRVRRIKKMKSKSKKAAALS
NNLPTSCSTVKSAASSKAEFPSKTFQSKDSRPWTGPSLSILLRDLRHIQNSKERSDKLFE
WLIAPVAPKKFFSDIWEKTPALIRRHNNNYYKGLFSSEDFDRILREDHVNFGVHLDVTSY
FDGEKETHTPTGRALPVVVWDFYKNGCSLRLLNPQTFSGTVWNILSILQESFGSMVGANV
YLTPPGNQGFAPHYDDIEAFVIQLEGKKSWRVYDPRSNEEILPNVSSRNFTQQEMGTPIM
DTVLEAGDMLYFPRGFTHQATCTSEVHSLHVTLSTYQRNSWGDLLHKLFPGALDLAIEDD
VEFREGLPLDYLEYMGVQNSEREDDPRRESFNKKIYNLMRKLLKYAPIDAAVDQKAKNYI
HDCLPPVLTKEELACTVYSAPARWRDGGPRNVVLQIRGSTRIRMLRSNIGRLCGENGSIL
LYYTIENSRDYHKEEEKCIEIDPELADGVELLLCSYPQYIKVDSLPAGNLDDKISLAAAL
YEKGLLMTEYPLLPKRD
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggcgaatcgtcgcgtgtcggccttctcggtgtatcggagcctgacagcggaaaacggg
aacgggcttagccagcagactgatgaacattcaaataaaatgagtcaagaaaaacaaaaa
cgttcactacatttgtccaggaggagcaagataatcaagaggaaacagaaatatttgaaa
gtcaaaatggaatcattggtggacattcacattgtgaataatgctgaaatattacaacgg
acaaatgagtgtgccgagaaggagcccacgggcccccatgttaagacaaaaattaatggt
aaacgggtgcgtagaattaaaaagatgaagtcaaagtctaagaaagctgctgcactgtcc
aacaatcttccaacaagctgttcaacagtaaagagtgcagcaagctccaaggcagagttt
cccagcaaaacgttccagagcaaagattcaagaccttggactggaccgtcattatcaata
cttcttcgggacctacgccacatacagaacagtaaggaaagatcggataaactctttgaa
tggttaatagcaccagttgctccaaaaaagtttttcagcgacatttgggaaaagacccca
gctttgattaggcgtcataataacaattactacaaaggattattctcctcagaagatttt
gacagaattttgagagaggaccatgtgaattttggcgtacacctggatgtaacaagttat
tttgatggggaaaaggaaacccatactccaactggcagggcattacctgtagtggtgtgg
gacttttataagaatggatgctctttgcggctgctgaatcctcaaaccttttctggcact
gtttggaatatactgtccattcttcaggagtcttttgggagcatggttggagctaatgtt
tatctgactcctcctgggaaccagggatttgcaccacattatgacgatattgaagcattt
gtgattcagctagaaggaaaaaagagctggcgtgtctatgatcccagatcaaatgaagaa
attcttccaaatgtttcaagccgtaactttactcagcaggaaatgggcactcctattatg
gatacagtgcttgaagctggggacatgctgtactttcctagaggttttacccaccaagca
acctgcacatctgaagtacattccctccacgtcaccctctcaacttatcagagaaactct
tggggagatctgctacataaactttttcctggtgccttggacttggcaattgaagatgat
gtagaatttcgtgagggcttgcctcttgattacttagaatatatgggagtacagaattct
gaacgggaagatgacccacggagggaatcatttaataagaagatatataacttaatgaga
aagttgctgaaatatgcaccaattgacgcagctgttgatcagaaagccaaaaattacatt
catgactgtctaccccctgtacttacaaaagaggaacttgcatgtactgtgtacagtgca
ccagcccgatggagagatggtgggccacgcaatgttgttctgcagatacgaggaagtacc
cggatacgaatgcttcgcagtaatattggcaggttatgtggcgagaacggcagtatattg
ctgtactacacaatagaaaattccagagactaccacaaggaggaggaaaaatgtatagaa
atagatccagagcttgctgatggggtagaactcttactttgctcgtaccctcaatatata
aaggttgatagtcttccagctggaaatctggatgacaagatctccttagctgccgccttg
tatgagaaaggtctattgatgactgaatatccattgctgcctaagagggactaa

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