Scyliorhinus canicula (smaller spotted catshark): 119975413
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Entry
119975413 CDS
T11175
Name
(RefSeq) lymphotoxin-alpha-like
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04060
Cytokine-cytokine receptor interaction
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119975413
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119975413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119975413
Cytokines and neuropeptides [BR:
scau04052
]
Cytokines
Tumor necrosis fators
119975413
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
119975413
NCBI-ProteinID:
XP_038670957
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Position
13:complement(6816525..6820443)
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AA seq
235 aa
AA seq
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MNSENKLLDLESGAVMVLRESEPKRSCFWQSICAVAVLGLLAVSSYLLLCQLGVLPSMQD
REVKFDTSNTATSQSRGLPHLLKQVGNDRTGRIAAHLTASPINKGKNVIWQNETDSTFTH
GVEFRDNRLIIKTPGQYFVYTQVVFYSRGCQDQAIYLSHEVAKLSPSYPEEELLLKATKS
ACHYGNHGDPWYKTSYQGAIFEFEEGDEIFSRVNEDVVEYVDTTTGKSFFGIFAV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgaaaacaagttactggaccttgagagtggagcagtgatggtgctcagggag
tcagagcccaagagaagctgcttctggcagtctatctgtgcggtggctgtactcggcttg
ctggctgtgtcttcttacctcctcctgtgtcagctcggagttctcccttcaatgcaggat
agagaagtaaagtttgacacctccaacacggcaaccagtcagagcagaggtttgcctcat
ctcttgaagcaagtgggaaatgaccgaacggggagaattgcagctcacctgacagcttca
ccaattaacaaaggaaagaatgtgatctggcagaacgagacagattccaccttcacccat
ggcgtggagttcagggacaaccgtctgattatcaagacccctggtcagtactttgtctac
acccaggtggtcttctacagcaggggctgtcaggatcaggccatctacctgagccacgaa
gtggccaagctgtcaccgagttatccggaggaagagttgctcctgaaagccaccaagtcc
gcctgtcactatggcaaccatggagatccctggtacaagacttcctaccagggagccata
ttcgagttcgaggagggagacgagatcttctccagggttaacgaggatgtggtggagtat
gtcgacacaactacaggaaagagtttctttggaatatttgctgtgtaa
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