Scyliorhinus canicula (smaller spotted catshark): 119975471
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Entry
119975471 CDS
T11175
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119975471 (smc4)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
119975471 (smc4)
Condensin II
119975471 (smc4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
THOC7
ATG16
Motif
Other DBs
NCBI-GeneID:
119975471
NCBI-ProteinID:
XP_038671092
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Position
13:94781232..94857915
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AA seq
1298 aa
AA seq
DB search
MPAKTKSSTAKQSAKLGPGGAQPLDESDNEMDIQQKATAPSVDEPTIGAVSESPVEPIDN
RSLEEILAGISPPPPPAMTNEPGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPN
GSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDF
EVIPNSEFYVSRTASKDNSSVYQINGNKSTFRDVGMLLRGHGIDLDHNRFLILQGEVEQI
AMMKPKGQNEHSEGMLEYLEDIIGSGRLKEPIQVLCRRVEILNEQRGEKLNRVKMVEKEK
DALEGEKNHAIEFLTLENEIVKKKNCVLQYYIHDVQKRIADMGAQKQKIHEDTQDTRDKT
VKLVDDIKVKNNALKHLEKKLGKITKFIEEKKETFAQFDLQDVKVREKLKHSKSKEKKLQ
KQLQKDMEKLEELKNVPGGSEKTIREATAKKEQLEQNKMKEEEKLKKVMDSLKQETRGLQ
EDKEVKEKELMELSKAVNETRSKMDVAQSELDIYLSRHKTALSQLNQAKEALSTNISTLK
ERKATIKELESKIPQSEQELQKNEKELEKIIQSEALTRNSVYELRQKVEEAKSSLTVNRS
RGRVLEAVMQQKNTGKIPGIYGRLGDLGAIDEKYDVAISSSCGALDNIVVDTIEAAQECV
KFLKKQNIGVATFICLDKMKVWEKGIGKIQTPEKVPRLFDVVKIKNEAIRPAFYFALRDT
LVAKDLEQATRVAFQKDKRWRVVTMQGQIIEQSGTMTGGGGRVMKGRMGSSLVVETTPEE
MDKMEAKLQKDLAAAQKCQEQKGHLEEKVVKEQQSFREMKNMLEKYTASIQGLTEQQVHL
TVQVKDFEANVAAAAPDQNKQKELQKTLEAFMKEYENAAAMAGKVEAEVKRLHTLIIDIN
NKKLKTQQDKLDKINKEIDDCVSSITKAQVAIKTAGRNFKKAEEAVNRSEEEIEENKKDI
ENLTEELKQVEEKGAIVLKECTEAQESLVSVTEEHNCLLQELKAIQEEQQALQKETLNIR
LKLEQIDGHIAEHQSKMKFWQREVSKMSLHPTDKPTDDLPELSEEDLLEIKNPDVINNQI
ALLEAKCLEMKPNLGSIAEYKKKEELYLRRVAELDEITNERDKFRCAFEDLRKQRLNEFM
AGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNISGGEK
TLSSLALVFALHHYKPTPLYFMDEIDAALDFRNVSIVAHYIYEQTKNAQFIIISLRNNMF
EIADRLVGIYKTHNTTKSVATNPKVISLQALPEVISTA
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccaaaacgaagtcttccacagccaagcaaagcgcaaaactgggtccgggggga
gctcagcccctggatgagtctgacaacgaaatggatatccaacaaaaggcaaccgcacca
agtgtagatgaacctacaataggtgctgtctcagaatcaccagttgaaccaattgataat
cgaagcttggaagaaattttagctggcatatctcctcctccacccccagcaatgaccaat
gaacctggagctcctcgcctcatgataacacatatagtgaaccagaatttcaaatcctat
gcaggagaacaaatcctgggcccttttcacaagaggttttcttgtattatcggaccaaat
gggagtgggaaatcaaatgtgattgattcaatgctgtttgtttttggctaccgggcccaa
aaaatccgttccaaaaaattgtctgtactcattcacaattctgatgaacacaaagacatt
cagagctgtactgttgaagttcactttcaaaaaatcattgataaggagggtgatgatttt
gaagttattccaaatagcgagttctatgtttcaagaactgcctccaaggacaattcatca
gtttaccaaattaatggaaataaatcaacattcagagatgtaggaatgttgcttcgcggc
catggaattgatctggatcacaacagatttttgattcttcagggtgaagtggagcaaatt
gccatgatgaagccaaagggccaaaatgagcacagtgagggtatgctggaatatctagaa
gacataattggatcaggacgattgaaagaaccaatacaggtcctctgtcgcagagttgag
attttgaatgaacagagaggagaaaagcttaatagggttaagatggttgaaaaagaaaag
gatgcattggaaggagaaaaaaatcatgcaattgagtttcttaccttggaaaatgagatt
gtgaagaaaaagaattgtgtcttacaatattacattcatgatgtgcagaaaaggatagcc
gatatgggggcacagaaacaaaaaatccatgaagatacgcaagatacccgtgacaaaact
gtcaaacttgtggacgacataaaagtcaaaaataatgctttgaaacatcttgaaaaaaaa
ctagggaaaattacaaagttcattgaagagaagaaggaaacgtttgcacagtttgacttg
caagatgtcaaagtccgagaaaagcttaaacattcaaagagtaaagaaaagaaactacag
aagcaactacaaaaggatatggagaagctagaggaactgaagaatgtacctggtggtagt
gagaagaccatcagagaagcaactgctaaaaaagaacagcttgaacagaataaaatgaag
gaggaagagaagctaaaaaaagtgatggacagtctcaaacaagagaccaggggattgcaa
gaagacaaagaggtgaaagagaaggagctcatggagttgagtaaagctgtaaatgagact
agatcaaagatggacgtagctcagtcagaactagatatctacctcagtcgccacaaaact
gctttgagccaactcaaccaggctaaagaagccctctctactaatattagtacacttaaa
gaaagaaaagcaacaattaaagaactggaaagcaaaataccacagagtgaacaagaactg
caaaagaatgaaaaggaacttgaaaaaataatccaatctgaagcgctgacccggaatagt
gtttatgaactgcgacaaaaagttgaagaagcaaagagctccctaacagtaaatcgtagt
cgcggtcgagttttggaggcagtaatgcagcaaaagaacactggtaaaattcctggaatt
tatggaagactgggtgacttgggtgctattgatgaaaagtatgatgttgccatctcctcc
agttgtggtgccctggataacattgttgtagacacaattgaagctgctcaagagtgtgtt
aaattcctgaagaaacaaaatattggagtagccacttttatttgcttagataagatgaaa
gtttgggagaaaggcattggcaagatccaaactccagaaaaggttccccgcctatttgat
gtggtcaagataaagaatgaggccatacgtccagcattttactttgcacttcgtgacaca
ctcgttgctaaggatctagaacaggcaactcgtgtggcattccagaaggacaagcgctgg
agagtggtaacaatgcaagggcagataatagagcagtcaggtaccatgactggtggcgga
ggaagagttatgaagggtagaatgggatcttccttagttgttgaaactactccagaagag
atggacaagatggaggctaaattgcagaaggatttagcagcagcacaaaaatgtcaagaa
cagaaaggtcatttggaagaaaaagtggtaaaggagcagcagagcttccgggagatgaaa
aatatgctggaaaaatacacagcaagtattcagggcctgactgagcagcaagttcacttg
acagttcaagtgaaagactttgaagcaaatgtggcagcagcagctcctgatcagaacaaa
caaaaagagctgcagaaaacactggaagcttttatgaaagagtacgaaaatgctgcagca
atggctggtaaagttgaggcagaggttaaacggttgcacacactcattattgacatcaac
aataaaaaacttaaaactcaacaggataaactagacaaaattaacaaagaaattgatgac
tgtgtttcatccattacaaaggcccaggttgctatcaaaacagcaggaaggaactttaaa
aaggcagaagaagcagtgaatcgatcagaagaagaaattgaagagaacaaaaaggatatt
gaaaacctaacagaagaattaaagcaagtggaggaaaagggtgccattgtactgaaagaa
tgcactgaagctcaggaatcattagtatcggtgactgaagagcataattgtttacttcaa
gagctgaaagcaattcaggaagaacaacaagcacttcagaaagaaactctcaatatacga
ctaaagttggaacagatagacgggcacattgcagagcaccaatcaaagatgaaattctgg
caaagagaagtatcaaaaatgtctttacaccctactgacaaaccgacagatgaccttcca
gaattgagtgaggaagatcttttggaaatcaaaaatccagatgtgataaataatcagatt
gcattactcgaagctaagtgtctggaaatgaagccaaacttgggttctattgcagaatat
aaaaagaaggaagaactatacctacgacgtgtggcagaactggatgaaatcactaatgaa
cgtgataagtttagatgtgcctttgaagacttgaggaaacaacgacttaatgaattcatg
gctgggtttaatatgatcaccaataaactgaaggagaattaccaaatgcttacactgggt
ggagatgctgagctggagttggtagacagtctagatcccttctctgaaggaattatgttc
agtgtgcgtccgccaaagaaaagttggaaaaaaattttcaatatttctggtggagagaag
acacttagttctctggctctggtttttgcccttcaccattacaagcctactcctttgtac
tttatggatgaaattgatgcggcactggattttagaaatgtttcaattgttgctcactat
atctatgaacagaccaagaatgctcaattcatcatcatttctttgagaaacaatatgttt
gaaattgctgataggctggttggaatctacaagactcacaatacaacaaagagtgttgca
actaatcctaaagtcatcagtcttcaagcacttcctgaagtaatcagtacagcttga
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