Scyliorhinus canicula (smaller spotted catshark): 119975483
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Entry
119975483 CDS
T11175
Symbol
nlgn1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119975483 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119975483 (nlgn1)
Membrane trafficking [BR:
scau04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
119975483 (nlgn1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COesterase
BD-FAE
Abhydrolase_3
Motif
Other DBs
NCBI-GeneID:
119975483
NCBI-ProteinID:
XP_038671111
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All DBs
Position
13:104878404..105607870
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AA seq
864 aa
AA seq
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MALHQERPQWLSCILRMVTVHPVRMGFDITFLLWILGFTLKGNLVLCQKLDDTYPVVNTN
YGRLRGVKKELSNEILGPVIQYLGVPYAASPTGDRRFQPPEPPSSWSEIRNATHFAPVCP
QNIHGMLPDVMLPVWFTANLEVIASYVQEQNEDCLFLNIYVPTEDVKRISKECARKPGKK
ICRKGGPLAKKQADDLGDNDGAEDEDIRDSGPKPVMVFIHGGSYMEGTGNILDGSVLASY
GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWISENIAFFSGDPLRITVFGS
GAGASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSYQPAKFARQLATKV
GCNMIDTIDLIECLRTKQYKELVEQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLN
YDIMLGVNQGEGYKFVESIVDNEDGVSASDFDFAVSNFVDNLYGYPEGKDVLRETIKFMY
TDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSGFGSPTFFYAFYHHCQSDMMPAW
ADASHGDEIPYVFGVPMIGATELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDT
KFIHTKPNRFEEVAWSRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHSLNDIS
QYTSTTTKVPSEITHRPSKKWSVTTKRPVTSVFPTVKQDDQKHSAGPFLVDQRDYSTELS
VTIAVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRNTANDLTHAQEEEIMSLQMKH
TDLDHDCDSFHPHEVVLRTASPPDYTLAMRRSPDDIPLMTPNTITMIPNTIPGMQPLHTF
NTFTGGQNNTLPHPHPHSHSTTRV
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcaccaggaaaggccgcaatggcttagctgcatattaaggatggtgacggtg
catccggtacgaatgggatttgatataactttcctcctttggattcttggatttacatta
aagggcaacctggtgctctgccagaaactagacgacacctacccggttgtgaacaccaat
tatggcagactgaggggggttaaaaaagaattgagtaatgaaatcttgggtccggtgatc
cagtatcttggtgtaccatatgctgcttcaccaacgggagatcgccgctttcaaccccct
gaacccccttcttcttggtcagaaatacgaaatgccacccattttgcaccagtttgtccc
cagaatatacatggtatgttgccagatgttatgcttccagtgtggtttactgccaacttg
gaagtaattgcctcttatgtccaagaacagaatgaagattgcctctttctaaacatatac
gtgcctactgaagatgtaaaaagaatatcgaaggaatgtgccagaaaacccggcaagaaa
atatgtagaaaaggaggtccccttgcaaagaaacaggctgatgatttaggtgataatgat
ggcgcagaagatgaagatattcgtgatagtggacccaaacctgttatggtcttcatccat
ggtggatcatacatggaaggcacaggaaatatacttgatggaagtgtgctggcaagttac
ggcaatgttatagtcatcactgtcaactaccggcttggtgttttaggatttttaagcaca
ggtgaccaagctgctaaaggaaattatgggcttcttgatcaaatacaagcattacgttgg
attagtgaaaatatagctttcttcagtggcgatccattacgaataactgtttttggatca
ggcgccggtgcctcttgcgtcaatctgttgactttatcccattattctgaaggtaaccgt
tggagcaattcaaccaaaggactttttcagagagcaatagcacaaagtggcaccgctttg
tccagctgggcagtcagctatcagccagcaaagttcgcaaggcagttggccactaaggtt
ggctgcaacatgatagataccattgacttgatagaatgcttacgtactaaacagtacaaa
gaacttgttgaacaagacatacagcctgcaagataccatattgcctttggaccagtcatt
gatggagatgttatacctgatgaccctcaaattctcatggaacagggtgaattccttaac
tatgacatcatgctgggagtgaatcaaggtgagggatataaatttgtcgaaagcatagtg
gacaatgaggatggagtttcagccagcgatttcgactttgctgtgtctaattttgtggat
aacctatacggttatcctgaaggcaaggatgtcctaagggagaccatcaaattcatgtac
acagattgggcagatcgacataatccagaaacaaggaggaaaacgttgttggctttgttt
actgaccatcaatgggtggcgccagcagtagctacagctgaccttcactcaggctttggt
tcgcctactttcttctatgccttttatcatcactgccagagtgacatgatgccagcttgg
gctgatgcttctcatggagatgaaatcccttatgtgtttggggtcccaatgataggtgct
actgaactattcccatgtaatttctccaaaaatgatgtcatgctgagcgccgttgtgatg
acgtactggactaactttgcgaaaacaggtgacccaaatcagcctgttcctcaggatact
aaatttatccacaccaagccgaaccgtttcgaagaggttgcctggtcaagatattctcag
aaagatcagctctatcttcacattggactgaaaccacgtgttaaagagcattatagagct
aataaagtcaacttatggttggagttggttcctcacttacacagtctgaatgacatttct
cagtatacttctacaacaacaaaggtcccttctgaaattacgcatagaccatcaaagaag
tggtctgttaccaccaaacgtcctgtgacatcagtctttcctactgtcaagcaggatgac
cagaagcattcagcaggtcctttcttggttgatcaaagagactactcaacagagctaagt
gttactattgctgttggagcctccttactgtttttgaacattcttgcctttgcagcattg
tattataagaaggataagagaaggcatgatgtgcatcgaagatgcagccctcaacgcaat
accgccaatgacctgacccatgcacaagaagaagagattatgtccctacagatgaagcac
actgatcttgatcatgattgtgattctttccatccacatgaggttgttctgcggacagcc
tctcctccggattatacgttagcaatgaggcgatctccagatgacatacctttaatgacc
cccaacaccattacaatgattccaaataccatacctggaatgcagcctctccatacattc
aacacatttactggaggacaaaacaacacccttccacatcctcaccctcattcacattca
acaaccagggtatag
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