Scyliorhinus canicula (smaller spotted catshark): 119975720
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Entry
119975720 CDS
T11175
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119975720 (hps3)
Membrane trafficking [BR:
scau04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
119975720 (hps3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119975720
NCBI-ProteinID:
XP_038671471
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Position
13:144345101..144399739
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AA seq
1007 aa
AA seq
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MVRVYNCHPFASQLIVPVQQEPSTFCCGRDTLFVVSAGCKIEAFNITESGCQPICTFVTL
GEVQKITFSEIGDYLATVEEKGKVLSLRVYLNWRGCQARGKSRVGIRMVGHVLQAPFKGT
PKDQMEIVEVPLSEPPLSISCCPTKGDLVVGCHNKVVFFRLKEERLDGGSLVLDFERFLI
VHVSLNLLEVAFCNGCLALIAELEVLVLKLERTQQVESKNQQQILQEVPGNKGIEKKGSD
PMEASLSQGQDEFVLFQSPLELVGEDTWGSGVLVSLEWTGVEGLTTEPQNNLHLHQILYR
RFAPDLSHIYSVEDTALHSLQLLPMYSAGDLESGAGSRRKEKQLLSLFCFFSLPHVGFLY
AVGNMVQQLSTYNYPETAKQAVLSPQFLHVITRNNLLCYTVRCSAVAARDKDPEMDTNNK
ACPLFFMPVSALRMQLFIGLRAVCLSRNHLILLAKAEGHDAPRQSESKKGLSQTFKAKTK
MPSVANEPGWNLYCLQMISTVQLCREMVDYSKKYQAFSPQSYVHLLSEAHLMLKAALLDP
DLCNQTGSEDLVFAFKENCAQLGDCYSQYEMDDFHLALPYYKMSGLSLSDLISRRFSWEN
EAQKFGKGFMYYLKHSVYEEIEEPLSEEAANQVLHVFKLAEPTQIPHALCSPCMRNVCLR
TAWDHLERLSAISPSPLVMLTKATVALRLQDLQKYQMAMERYTETRLVCGLVLEPNLLRH
HGFEPTELACELKRTQPGLLVAAFVALLDSNKIELEEAELFFKALCAKGAEEESEAATPQ
LLVDFWEAMLIACTQEAMVQVLLMKLVSVYIWRTARKQQPDSRPLKTVEDLMNSCDQFGK
IFSWIYTINASYSHPQDTSEDLPKLQSILCGSSIDVKSVLPLLHQLPEDDAPGLSIHVLC
STRLGECERVTDQLLDRCPEAVVPFANCEMQQERQPLWWKKLLPELCRRTKGAGGGNRIL
VSSLKETLATVATALQPLDFLSILPDDGVASFFLPHLLECSRKNSIT
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagtgtacaactgtcacccgtttgcttcccagctgatcgtccccgttcaacag
gaacccagcactttctgctgcgggcgggacacgctcttcgttgtctccgctggctgcaaa
atcgaagcgtttaacattacagagagcggatgtcagcctatctgcactttcgttaccctt
ggggaagtccagaaaataaccttcagtgaaataggagactatcttgctacagttgaagag
aagggcaaggttctctccctgcgtgtctacttgaactggaggggatgccaggcacggggg
aaatcccgagttggcatccgaatggtgggacatgtgttgcaggctccgtttaaagggaca
cccaaagaccagatggaaattgtggaggtgccgctctctgagcccccgctctccatttct
tgttgccccacgaagggagacctggtggtcgggtgccacaataaggtggtgttcttccgc
ttgaaggaggagaggctggacggcgggagtctcgtgttagattttgagcgtttcctgatc
gtgcatgtcagtctgaacctgctggaagtcgctttttgcaatggctgtttagccttgata
gctgaactggaagtactggttctaaaactggagaggacccaacaagtggagagcaagaac
cagcaacagatccttcaggaagtgccaggcaacaagggcattgaaaaaaaaggctctgac
ccgatggaagcatctctgagccaaggacaggatgaatttgtcctctttcaaagccctttg
gaattggttggagaagacacctggggatcaggagtgttggtcagtttggagtggacaggc
gtggagggtttgacaactgagccgcagaataatctacacctacaccagattctgtacagg
cgttttgctccagatctatcccacatttactcagttgaagatacagctctgcattccctt
cagttactcccaatgtactctgcaggagacctggagtcaggcgctggatctaggaggaag
gagaagcagctgctcagtctcttctgtttcttttcgttgccacacgtgggcttcctgtac
gctgttggcaacatggtacagcagctgtccacctataattacccagaaacggccaagcaa
gcagtgcttagccctcagttcctgcacgtcattaccaggaataatttgctatgttacaca
gtcaggtgcagtgcagtagctgctagagataaggacccagagatggacacaaacaacaag
gcctgtccactgtttttcatgccagtaagtgccttgcgtatgcagctctttattggacta
agagcagtgtgcctttccagaaaccacttaattctgctggccaaggcagagggccatgac
gcacccagacaaagcgagtcaaagaaaggattatctcaaacgttcaaggctaaaactaaa
atgccatcggttgctaatgagcccgggtggaatttatactgccttcagatgatctcgact
gttcagttatgcagggaaatggttgactacagcaagaagtaccaggccttcagtccacag
agttacgttcacctgctgagtgaagcgcacctgatgttaaaggcagctctcctggaccct
gatctatgcaaccaaacgggcagcgaagatttagtgtttgctttcaaagagaactgcgcc
cagctgggggactgttacagccaatacgagatggatgattttcacctcgctctcccctac
tacaagatgtcaggcttgtcactgagcgacctaatcagcagaaggttttcatgggaaaat
gaagctcagaaatttggaaaaggatttatgtattacttgaagcattctgtctatgaggag
attgaagagccactgagtgaagaggcagcgaaccaggtgctgcatgtattcaagttggcc
gaaccaacacaaattcctcatgccttgtgcagcccatgtatgagaaacgtgtgcctgagg
actgcatgggaccatttggagaggctgtcggcaatcagcccctcccccctggtgatgctg
accaaagcaacagtggcgctgagactccaagacctgcagaagtaccagatggccatggag
cgatacacagagacgaggttggtttgtggtttggtgctggaaccgaatctcctgcgacat
cacggctttgagccaacggagttagcttgtgagctgaagaggacccagcctggcctcctg
gtagctgcatttgtagctttactggatagtaacaaaattgaactcgaagaggctgaattg
ttctttaaggcactctgtgcaaaaggtgctgaagaagaaagtgaagcggcgactccacag
cttctggttgatttctgggaagccatgttgatagcctgcactcaggaggcgatggtccag
gtactgctcatgaagctggtgtcggtatatatctggagaacagcccggaaacagcagcct
gatagcagaccactcaaaacagtcgaggacctgatgaactcgtgtgatcaatttggtaaa
attttttcatggatctacaccatcaatgcatcgtattcgcatccacaagatacttcggag
gatcttccaaagttacagtccattttgtgtggttcgtcaatcgatgtgaaatctgttctt
cctcttctacatcaactccctgaagatgatgcccctggcctgagtatccatgtgctgtgt
tccacaaggctgggtgaatgtgagcgtgtaactgaccaactccttgaccgatgtcctgag
gctgttgtaccatttgccaattgtgagatgcagcaggaaagacagcccctgtggtggaaa
aaactgttgcctgaactttgtaggaggacaaaaggagctggcggaggaaacagaatcttg
gtttcttcactgaaagaaaccttggcaacggtggccaccgcactacagcctctggatttt
ctgagtatcttgccagacgatggtgttgcttcatttttcctaccccatctcctggaatgc
agcaggaagaattccataacctga
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