Scyliorhinus canicula (smaller spotted catshark): 119975825
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Entry
119975825 CDS
T11175
Name
(RefSeq) zinc-binding protein A33-like
KO
K12015
tripartite motif-containing protein 39 / bloodthirsty-related gene family protein [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119975825
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119975825
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119975825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_6
zf-RING_5
Prok-RING_4
U-box
zf-RING_10
zf-ANAPC11
TraI_2_C
zf-Nse
GST_C_7
Motif
Other DBs
NCBI-GeneID:
119975825
NCBI-ProteinID:
XP_038671633
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Position
13:complement(3388384..3406952)
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AA seq
480 aa
AA seq
DB search
MASRQQEESWTEEAICSICLDFFTDPVLLECEHNFCRSCITQCWEKKERNSCPECRQEFP
ERNLRTNRVLVNLAEKARKLKLNREEKESKLHCEEHQEELKLFCETDKKLICVICRDSRK
HKSHNFLPILEAVEIYKDGVKSALDSLTQKKSTVLEMEQQQKQKISQIRKQSVSLQSHIT
SEFTEMHQILTEKEQRFIRDLREEEEQILKTMEENLCEIQENLNSIQEKLSKLEKQLEQK
DGVRFLKEEASGKRRISDEDKSLLLADGVLSIGKFNSPFPFPVWREMLDLINPVSVTLDM
ETANPWLEVSEDLKSLRRTGTQRNLPDTRKRFTYWPCPCVLGSEGFTSGRHYWEVEVTGN
RGWDLGVAAKSVERKDWHSLIPGTGFWTIGRFVDEFYIKSSPESRLPVGQIPGKVGVYLS
YESGTVSFYNVDTKSHLHTFTGNKFTEKLYPFFGTWDENQFLRICSGSDLDPKRGGASGW
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagacaacaggaggaaagttggaccgaggaggcaatttgttccatttgtctt
gatttcttcactgatccggttttactggaatgtgaacacaatttctgccgctcctgtatc
acccagtgttgggaaaagaaggagagaaactcctgcccggaatgtcgacaggagtttcca
gaaagaaacctcagaaccaatcgggtcttagtgaatttggctgagaaagctcgaaaatta
aagctgaatcgggaagagaaggaaagtaaacttcactgtgaggaacatcaggaagaactg
aagctgttttgtgaaactgacaagaaattgatctgtgtgatttgtagagattcgcggaaa
cacaaatctcacaactttctgccgattttagaagctgttgaaatctacaaggatggggtg
aaatctgccttagattctctcacacagaagaaatcgacggttctagaaatggagcagcag
cagaaacagaagatttcccaaattaggaaacagtcggtcagtctgcagagtcacatcaca
tccgagttcactgaaatgcaccagattctcactgagaaagagcagcgtttcatccgagat
ctcagggaagaagaggaacaaattctgaaaacaatggaggaaaatctttgtgaaattcag
gagaatttaaattctattcaggagaaactctcaaagttggagaaacagttggaacaaaaa
gacggagtgagatttctgaaggaggaagcgtctgggaagaggaggattagcgatgaggat
aaaagtctgttactagcagatggtgtcctgtccatcggaaaattcaacagccctttcccg
ttcccagtgtggagagaaatgctggatctcattaaccctgtctctgtgaccctggatatg
gaaacagcgaatccctggctcgaggtgtctgaggatctgaagagtttgagacggaccggg
acccagaggaatctccctgacaccaggaagaggtttacatactggccctgtccctgtgtg
ctgggatcagagggattcacatcggggagacattactgggaggtggaggtgacggggaat
cggggctgggatctgggagtagccgcaaagtctgtggagaggaaggactggcacagtctg
atcccagggactggattctggaccattgggcggtttgttgatgagttttatataaaatcc
tctcctgaatcccgtctccctgtcggtcagatccccgggaaggtgggagtttatctcagt
tatgagtctgggacagtttcattttacaacgtggacaccaagtcccatctccacaccttc
actgggaataaattcactgagaaactttatcctttcttcgggacttgggatgaaaaccag
tttctgagaatctgctccggttctgatctggacccgaaaaggggcggggcctcggggtgg
tga
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