Scyliorhinus canicula (smaller spotted catshark): 119975880
Help
Entry
119975880 CDS
T11175
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119975880 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scau01007
]
119975880 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119975880 (farsb)
Enzymes [BR:
scau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
119975880 (farsb)
Amino acid related enzymes [BR:
scau01007
]
Aminoacyl-tRNA synthetase
Class II (U)
119975880 (farsb)
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119975880 (farsb)
Prokaryotic type
119975880 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
119975880
NCBI-ProteinID:
XP_038671703
LinkDB
All DBs
Position
13:complement(89371801..89441015)
Genome browser
AA seq
589 aa
AA seq
DB search
MPTVSVKKDLLFRALGQTYTDEEFDELCFEFGLELDEVTSEKDIISREQGDGKAEGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKDRIEAPRYTRVGPPNGDMQKLIIAEETAQVRP
HAVAAVLRDIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTVSGPFTYTAKPPS
EIKFKPLNQSKEYTASELMDLYRTDNHLRHYLHIIEDKPVYPIIYDSNGIVLSMPPIING
DHSKITLNTQNVFIECTATDRTKAKIVLDTIVTMFSEYCEKPFTVEAAQVIYPNEETYIY
PELGYRKEILSADFINKRIGINETAKSVAKLLTRMYLKSKVMGDGEQIEIEIPPTRADII
HPCDIVEDAAIAYGYNNIKMTVPKAYTVANQFSLNKLSELLRQDMAAGGFTEALTFALCS
QDDVADRLGKDIAEIRAVHIANPKTAEFQVVRTTLLSGLLKTTAANRKMPLPLKLFEISD
VVLKDPSKDVGARNTRRLCAMYYNKNPGFEVIHGLLDRVMQLLELKPGKENGYYIQTAED
STFFPGRCAEIFAKGQSIGKLGVLHPDVITKFELTMPCSALEIDIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagtgtgaagaaggatttgttatttcgggctttgggtcaaacgtacacc
gatgaagaatttgatgaactatgttttgaatttggcctggaattggatgaagtgacatct
gaaaaggacattataagtcgagaacagggagatggaaaagcagaaggtgcatctgatgtg
gtactgtataaaatcgatgttcctgccaaccgctatgaccttttatgcctggaaggattg
gtccgtggattgcaggtcttcaaggacagaattgaagctccaaggtacacaagagtaggg
ccacctaatggagacatgcagaaattaattattgccgaagagactgcacaggtccgtcca
catgctgtagcagctgtccttcgtgatattaagtttaccaaggatcgctatgacagtttc
attgagctgcaagagaaactgcatcaaaacatctgcaggaagcgagctctggttgctatc
ggaacacatgatctggatacagtgtctggaccctttacgtatacagcaaaaccaccctct
gaaattaagttcaaaccgttaaaccagtcaaaggaatacacggcttcagaacttatggat
ctttataggacggacaatcaccttcgccattatttgcatatcattgaagataagccagtt
tatcctattatttatgacagcaatggcatagttctttccatgccacctatcataaatggc
gatcacagcaaaataacactcaacacacagaacgtttttattgaatgcaccgcaactgat
cgcactaaagcaaaaatagtgttggatacgattgtcacaatgttcagtgagtactgcgag
aaaccgtttacagttgaggctgcacaggtgatttatcctaatgaagaaacgtatatttac
ccagagctggggtacaggaaagagattctaagtgcagactttattaacaaacgaatagga
atcaatgaaacagccaagtctgttgctaaattgctgactcggatgtacttaaagtccaaa
gtgatgggggatggggaacaaatagaaattgaaatcccccccacaagagcagacatcatc
catccatgtgatattgtagaagatgcagcaatagcctatggctacaataatatcaagatg
acagttccaaaagcctatactgtagctaatcagttttcgctgaacaagttgtctgagttg
ctgaggcaagacatggcagctggtggattcacagaggccttgacatttgccctgtgttct
caagatgacgttgcagacaggttgggcaaggacatagcagagataagagcagtacatatt
gccaatcccaaaacagctgaatttcaggtagttcgtaccactcttctatctggtctgctg
aagacaactgcagctaaccggaagatgccactgcctctgaaattgtttgaaatttctgat
gttgttctgaaagacccttcgaaagatgttggtgcgaggaacaccaggcgcctctgtgcc
atgtactacaacaagaaccctggctttgaggtgatccatggcttgttggaccgtgtaatg
cagcttcttgaactgaaaccaggaaaggagaatggatattacattcagactgcagaagat
tccactttcttcccgggtcgatgtgcagagatctttgctaaaggtcagagtattggcaag
ctgggagttcttcatcctgatgttatcaccaaatttgaactgaccatgccctgctctgca
ctcgaaatcgacattgagccttttctttga
DBGET
integrated database retrieval system
