Scyliorhinus canicula (smaller spotted catshark): 119975910
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Entry
119975910 CDS
T11175
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119975910 (rnf20)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119975910 (rnf20)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
119975910 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
CC_Bre1
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
119975910
NCBI-ProteinID:
XP_038671773
LinkDB
All DBs
Position
13:31246135..31285100
Genome browser
AA seq
998 aa
AA seq
DB search
MKEREMPNVGSKRSAAEAHSAGPPEKSSNLEEPAGSSGAKVETIKLGSDTSTEELDIRTL
QTKNRKLAEVIDQRQSIEDELREQIEKLVKRQATDDATLLILNRYWCQFDENVRIILQRW
DLEQEQESRDMLTEKKMLVVSDPEPDSDSNQERERREDREKGSRDGQSENALPFLAMLAS
STSEEMELQLQDRVMSSRLALSSTVDIFEKLRLRISQLVEWVTSKGSPQLEEALRELNSL
LSRENQRLLELTDFLREKHRKMSQEFSELQGKLEEAESRLLDMQTTIEDLQWDTDKIRKR
EQRLNRHLAEVLERVKSKGYKVYGGSSNLYGGTVTINARKFEEMNSDLEENKELALNRLS
ELEKMRQDLQLVTGDNEKLRDQLKTLANEMVKDSPEFRCLQSQFSVLYNESLQLKAQMDD
ARNLLFATRTTHQRQVEQMEGDEVGLQKKLRTEVMQLEDTLAQVRKEYEMLRIEFEQTLA
ANEQAGPINREMRHLISSLQNHNHQLKGDVQRYKRRLRDSHTELAKVRRKVWETHSDLGT
VRSRGASGSQLQAGAETVKEEPPEVKQEPEEAGIKREKEEAEAAKARKQQQEEEKEKERE
RERREKERERAREKGREKEAEKEREKDKAEKDRERSKPEDAKKKEAEMVKQLRVELKRAQ
ESQKEMKLLLDMYRSSPKEQRDKVQLMASEKRAKAELDNLRQRVKELEEKERHEGKKMAD
VEALRRMKLVDEQMEHMLKKVAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKD
DANFKLMSERIKSNQIHKLLKEEKEELGDQVLTLKTQVDAQLQVVKKLEEKEQLLQTNLT
AMEKELSLRTQTLDMHKRKAVEAAQLGEDLKVQLEADQKKLSEVQNNIIESSVSREKETF
NYKRAQEDISKLRRKLERQKKPEMFTNCDEILMEEIKDYKAKLTCPCCNMRKKDAILTKC
FHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagggagatgcccaacgtaggtagcaagcgttctgcggcagaggctcattcc
gcggggcctcccgaaaagtcatctaacctggaggagcctgccgggagttctggagccaaa
gtggagaccataaagctggggagtgacacctccacggaggagcttgacatccgaactctc
cagactaaaaaccggaagcttgctgaggtaatcgaccagcgacagagcattgaggacgag
ctgagggaacaaatcgagaagctggtgaaacgacaggcgacagatgatgcaacattactt
atcctgaaccgctactggtgccagtttgatgagaatgtgcggatcatcctgcagcgttgg
gatctggagcaagagcaggagagtcgggatatgctgactgaaaagaagatgctggttgtg
tctgacccagagcccgattccgacagcaaccaggagcgggaacgtcgggaggacagagag
aaagggtccagggatggacagagtgagaacgcgctgccattcttggctatgctggccagc
agcaccagcgaggaaatggaactgcagcttcaggatcgggtgatgtcctccagactggcc
ctgtccagcaccgtcgacatctttgagaagctgaggctcaggatcagtcagctagttgag
tgggtcaccagcaagggttcaccccagctggaagaggcattgagggagctgaactccctg
ctgtcgagggagaaccagagactgctggagttgacagacttcctccgagagaaacaccgc
aaaatgtcacaggagttttcggaactccaggggaagctggaggaggcagagagtcgcttg
ttggacatgcagaccacgatcgaggacctgcagtgggacacagacaagattcgcaaacgg
gagcagagactgaacaggcacttagcggaggtgctagagcgggtgaaatcgaaaggttac
aaggtttatggaggatcgagtaatctgtacggtgggacagtgaccatcaacgcgagaaag
tttgaagagatgaattctgacctggaagagaataaggagttggcgttgaaccgtctctcg
gagctggagaagatgcgacaagatctccagctggttaccggggacaatgagaaactgagg
gatcagctgaaaactcttgcgaatgagatggtgaaggattccccggagtttcgctgtctt
caatcccagttctctgtgctttacaacgagagcctgcagctgaaggcccagatggacgat
gcccgcaacctgctctttgccactcgaaccacacaccagcggcaggtggagcaaatggag
ggggatgaggtgggtctgcagaagaaactgaggacggaggtgatgcagctggaggatact
ctggcccaggttcgcaaggaatatgaaatgctgcgaatcgaatttgagcaaacgctggcc
gccaatgaacaagcagggcccatcaaccgggaaatgcgtcacctgatcagcagcctccag
aaccacaaccaccagctgaagggggatgtacagcgttacaagcggagactccgggacagc
cacacggagctggccaaagtgcgcaggaaagtctgggagacgcacagtgacttgggaacg
gtccggtcacggggagccagcggatcccagcttcaggccggagccgagacggtcaaagaa
gaacctccagaggtcaaacaggagcccgaggaagccggcatcaagagggagaaagaagaa
gctgaggctgccaaggccagaaaacagcagcaggaggaagagaaggagaaagagagggag
cgagagaggcgggagaaggagagggagagggccagggagaaggggagagagaaagaggca
gagaaagagcgtgaaaaggacaaggcagagaaggatagagagcggagcaagccagaagat
gccaagaagaaagaggcagagatggtcaagcagctcagagtggaactgaagagagctcag
gagagccagaaggagatgaaactcttgttggacatgtaccgctcatcaccgaaggagcag
cgcgacaaggttcagctgatggcatccgagaagagggcgaaggcggagttggataacctg
aggcagcgtgtcaaggaattggaggagaaggagagacatgaggggaagaagatggcagat
gtggaggctctgcgccggatgaagttggtggacgagcagatggagcacatgctcaaaaag
gtcgccatggcgaaacaggaggaggaagctctcctctcggagatggatgtgaccggccag
gcgtttgaggacatgcaggaacagaatatacgtctaatgcagcagctccgagagaaggat
gatgccaacttcaaactgatgtccgagcgaatcaaatccaaccagatccacaaactgctg
aaggaggagaaggaggagctgggggaccaagtgctgaccttaaaaacccaggtcgatgcc
cagctccaggttgtgaagaagttagaggaaaaggaacaattactgcagaccaacctaacg
gccatggagaaggagctgtcccttcgcactcagactctggacatgcataaacgcaaggca
gtggaagctgcccagctgggtgaagatctgaaggtgcagctggaggctgatcagaagaaa
ctgtcggaggttcaaaacaatatcatcgagagcagtgtttcccgggagaaagaaaccttc
aactacaaacgagcacaggaagacatctcgaagctgcgtcgcaagttggagcggcagaag
aaaccggaaatgttcaccaactgtgacgagatcctgatggaggagatcaaagattacaag
gccaagctgacctgtccctgctgtaacatgaggaagaaggacgccatcctgaccaagtgt
ttccacgtcttctgcttcgagtgcgtcaagacccgctatgacacgcggcagcgcaaatgc
cccaagtgcaatgctgccttcggggccaatgacttccaccggatctacatcggctga
DBGET
integrated database retrieval system
