Scyliorhinus canicula (smaller spotted catshark): 119975944
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Entry
119975944 CDS
T11175
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
119975944 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
scau03051
]
119975944 (psmd1)
Proteasome [BR:
scau03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
119975944 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
HEAT
Tim54
Motif
Other DBs
NCBI-GeneID:
119975944
NCBI-ProteinID:
XP_038671844
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All DBs
Position
13:complement(125204637..125340313)
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AA seq
966 aa
AA seq
DB search
MITSAAGIISLLDEKEPQLKEFALHKLNSVVNDFWAEISESVVKIEELYEDETFRSREFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDESEYVETIIAKCIDHYTKLRVENRELPD
GEEKSVDPRLEGIVNKMFQRCFDDHKYKQAIGIALETRRLDVFEKVILESNDISGMLAYS
VKVCMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESANQQFLSSVIQNLKTVGTPVAVVPGSTNTGTVPTAEKESEAMETD
EKLGNSPVASVKTTELTAESKALQDQNTKMIKILSGEMSIELHLQFLIRNNNTDLMILKN
TKDAVRNSVCHTATVITNSFMHCGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGH
EKEALQLMATYLPKDSSPGSAYQEGGGLYALGLIHANHGGDIIEYLLNQLKNASNDIVRH
GGCLGLGLAALGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGY
AQETQHEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGN
NKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAALA
LGICCAGTGNKDAINLLEPMTNDPVNYVRQGALIASALLLIQQTEVTCPKVTQFRQLYAK
VINDKHDDVMAKFGAILAQGILDAGGRNMTISLQSRTGHTHMPSVVGVLVFTQFWFWFPH
SHFLSLAFTPTAVIGLNKDLKMPKVQCRSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSI
TAKAKKKEKEKEKEKGKEKEEEKMDVEETEKKDEDKEKEKKKEPEPSSQLLENPARVMPA
QLKVLVMPEGCRYQPFKPLSIGGIIILKDTSEETEELVEPVDAHGPKIEEEEEEPEPPEP
FEYIDD
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcagccgctggaatcatttcgcttttggatgaaaaagaaccacagctcaag
gagtttgctctgcacaagttgaactcggtagtcaatgacttctgggctgaaatttcagaa
tctgtggttaaaattgaggagctgtacgaagatgagactttcagaagtcgggagtttgct
gccttggtggcatctaaagttttctaccacttgggagcctttgaagaatcgttgaactat
gcacttggagctggggatctcttcaatgttaatgatgaatctgaatatgtggagaccatt
atagcaaaatgcattgatcattatacaaagctacgagttgaaaatagagaactacctgat
ggtgaggagaaaagcgttgaccctcgattagaaggtattgtgaataagatgttccaacgc
tgttttgatgaccacaaatacaagcaggcaattggcattgctctagagaccaggcggctt
gatgtctttgagaaagtgattcttgaatctaatgatatctctgggatgcttgcatacagt
gtgaaagtatgcatgtcactcatgcagaataagaaattcagaaatgaagttctgcgtgtt
ctggttaaactgtatatgaatctggaaaaaccagacttcattaatgtgtgtcagtgccta
attttcctagatgacccccaggcagtaagtgatatcttggaaaagcttgtaaaggaggac
aacttactgatggcctatcagatttgttttgacttgtatgaaagcgccaaccaacaattc
ctgtctagtgttatccagaatctgaagactgtaggaactcccgttgctgttgtaccaggt
tctacaaacacaggaactgtgccaactgctgagaaagaaagtgaagctatggagacggac
gaaaaattgggaaactctccagtagcatccgtgaaaacaacagaattgactgctgagtcc
aaggccttgcaggatcagaacacaaaaatgataaaaatactaagtggtgaaatgtctatt
gagttacatttacagtttttaatacgaaataacaacacagatcttatgatattaaagaac
acaaaggatgcagtcaggaattcagtttgtcatacagcaactgtgattaccaactctttc
atgcattgtggaacaacaagtgaccagtttctcagagagaatcttgagtggttggcaaga
gccaccaactgggctaagtttacagcaacagccagtctgggagttatccacaagggtcat
gaaaaggaggccttgcagttaatggcaacatatttacccaaggactcctcacctggctca
gcttatcaggagggaggaggcctgtatgccctcggtctcatccatgcaaatcatggtggt
gacatcatagaatatttgctcaaccagctaaagaatgcaagcaatgatattgtgcgtcat
ggtgggtgccttggccttggtttggctgcactgggtactgctcgacaggatgtctatgac
ctgctcaaaacaaacctgtaccaggatgatgctgttactggtgaggcagctggtctggca
ctgggacttgtcatgctaggatcaaagtcagcccaagcaattgaggatatggtgggttat
gctcaggaaacccagcatgaaaagattcttcgtggcttggctgtaggcattgctatggtg
atgtatggcagaatggaagaagcagatgctctgattgagagtctttgcagagataaggac
cccattctcagacgttcaggaatgtatacagttgcaatggcatattgtggttctgggaat
aataaagcgatcagaagactgctgcatgttgctgttagtgatgtcaatgatgatgtcaga
cgtgctgcagtagagtcgcttggatttattttattcaggacaccggaacagtgcccaagt
gtagtgtctctgctttctgaaagctataaccctcatgttcgatacggtgctgccctagct
ctgggaatatgctgcgctggaactggcaacaaggatgccataaaccttttggagccaatg
actaatgatccagtgaactacgttcgtcagggtgctctgattgcttctgcccttctcctg
atccagcagactgaggtcacatgtccaaaggtcacacaattccgacagctctacgcaaag
gttatcaatgacaagcatgatgatgtcatggccaagtttggtgctatactagctcagggc
attcttgatgcaggtggccgcaacatgaccatttcactccagtcacggacaggacacacc
cacatgccctcagtggtcggggtgctggtgttcacccagttctggttttggttccctcat
tcacattttttgtccctggccttcactccaactgcagtcattgggcttaacaaggatctc
aagatgccaaaagtccagtgccggtcgaattgtaagccatcaacgtttgcctatcctgct
cctctggaggttccgaaagagaaagaaaaagaaaaggtttccacagctgtcctgtcaatc
actgccaaagcaaagaagaaggagaaggagaaggaaaaagaaaagggaaaggaaaaagag
gaagaaaaaatggatgttgaagagactgagaaaaaggatgaagacaaagagaaagaaaag
aaaaaggagccagagccaagcagtcagttattggagaacccagcccgagtgatgcctgct
cagcttaaagtcttggttatgccagaagggtgcaggtaccagccgtttaaacccctgtca
attggagggattataattctaaaggacacgagtgaagagacagaagagcttgtggaaccc
gttgatgctcatggacccaaaattgaggaagaagaggaagagcctgaaccaccagagcca
tttgaatatattgatgattaa
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