Scyliorhinus canicula (smaller spotted catshark): 119975965
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Entry
119975965 CDS
T11175
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119975965 (ccdc50a)
Membrane trafficking [BR:
scau04131
]
Autophagy
Other autophagy associated proteins
Others
119975965 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
119975965
NCBI-ProteinID:
XP_038671887
LinkDB
All DBs
Position
13:159754184..159859045
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AA seq
501 aa
AA seq
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MADFTIDQSSLPAVNAVCREFAVREDHSLAHNLQEQEIEHHLASNVQRNRLVQNDLQMAK
KLQEEENKKAQARLQKQQWDMERRDNQIAQVIQDELMLENEKRRRQEEKDEAIARKLQEK
EEKLRRKHQQEQYDGGSEENGDHMKNRVHKHDRTSRHGNDSRRNRDLRYKRDSEPKVDPI
SKSQIDDWATEPAAHGSREKLPPSDTERANNYPDADRRRPETRPHRKEAPKRPPPPVLHS
AKVAAARYDSQGARPKVAEVGDECGDPSGCGVHCCKPDVKTSCNRIPETLGACAPDPEEL
LARESQCREDVVMARKERRQAGRSRSPDLRGESNNCQEPGMKPRMDKAVKETMHGISKMS
AKDLEWKDAELARKLQEEELMAIQSSKTAAQMVQDEEIARLLMEEENKQSHRKSKEKDFA
WRAEEDRRKGSSERRKHEQEKKRDATEYVRSKPREGPEQMTGKPERPGRPPSHREESIPQ
HPSRPVSKSSESSQKVSYYRQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttcaccatcgaccagagcagcctccccgccgtcaacgcagtttgtcgggag
tttgcagttcgggaagatcacagtttggcccacaaccttcaggaacaggaaattgaacat
cacttggcgtccaatgtacaaagaaaccgtcttgttcagaatgacctacaaatggccaag
aagctgcaagaggaggagaataagaaagcccaagcccgccttcagaaacagcagtgggac
atggagcgccgtgataatcagatagctcaggtaattcaggatgagctgatgttggaaaat
gagaagcggcgacgccaggaagagaaggatgaggccattgctcggaaacttcaggagaag
gaggagaaactaaggcggaaacatcaacaggaacaatacgatggcggttccgaagaaaat
ggagatcacatgaaaaacagggtgcacaaacacgatagaaccagcaggcatggaaatgac
tcccgtagaaatagagatttaaggtacaaaagggacagtgaaccgaaagtagacccaatc
tcaaaatctcagattgatgactgggccacagagccagcagctcatggatccagagagaag
ttacctccttcagacactgaacgggctaataattatccggacgctgacagacggaggccc
gagacccgccctcacaggaaggaggcaccaaagagaccacctccccctgtcctgcactcg
gctaaggtggctgctgccagatacgacagtcagggtgctcggcccaaggtcgctgaggtt
ggggatgagtgtggtgacccgtccgggtgtggtgttcactgctgcaagcccgatgtcaaa
acgtcgtgcaaccgtatccccgaaactttgggggcttgcgcccctgaccctgaggaactg
ctggcaagagaaagccaatgcagagaagatgttgtgatggcgaggaaggagcggcgacag
gcaggacgttcacggtcacctgacctgcggggtgagagcaacaactgccaggaaccaggg
atgaagccaagaatggataaagcagtgaaggaaaccatgcatggtatttcaaagatgagt
gccaaagacctggagtggaaagatgctgaactcgcacggaagcttcaagaagaagagctg
atggctatccaaagttccaagacagcagctcaaatggtccaagatgaggagatcgcccgg
ttactgatggaggaagagaataagcagtcccacaggaaatccaaggaaaaagattttgca
tggagagcagaggaggacaggaggaagggatcttcagaacgcaggaagcatgagcaggaa
aagaagcgcgacgccactgaatacgtcaggtccaagcctcgggaggggccggaacaaatg
acagggaagcctgaaagaccaggaaggcctccttcacacagagaagagtcaatcccgcag
cacccttctcgcccagtttccaagtcttccgaatcatcacagaaagtttcttattacagg
cagtga
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