Scyliorhinus canicula (smaller spotted catshark): 119975969
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Entry
119975969 CDS
T11175
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a
KO
K06671
cohesin complex subunit SA-1/2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119975969 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119975969 (stag1a)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119975969 (stag1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
119975969
NCBI-ProteinID:
XP_038671893
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Position
13:complement(78968094..79215372)
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AA seq
1261 aa
AA seq
DB search
MITPEIPVLQESTNETTIHPDVTGEFEDPEAKGRKRRARGPGRPPTAKKARRITGEKGRA
GAGGRASQGKANGHHQQNGDIEPVTLFEVVKMGKSAMQSVVDDWIESYKQDRDIALLDLI
NFFIQCSGCKGTVRIEMFRNMQNTEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRTNFCEF
IGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLS
IHQDNTQRQYEAERNKMIGKRANDRLELLLQKRKELQENQDEIENMMNSVFKGIFVHRYR
DAISEIRAICIEEIGVWMKSYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNK
ELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEEALSNEDCENVYHLVY
SAHRPVAVAAGEFLNKKLFSRHDPQAEEAYAKSRGRHSPNGNLIKMLVLFFLESELHEHA
AYLVDSLWESSQELLKDWECMVELLLEEPIQGEEGMTDRQETALIELMVCTIRQAAEAHP
PVGRGTGKRVLTAKERKTQIDDRTKLTEQFIVALPMMLGKYSADSEKVANLLQIPQFFDL
ELYSTGRMEKHLDSLLKQTKFVVEKHIESDVLESCSKTYNILCSEEYTIQNRVNIARSQM
IDELVERFSQSVEDLLQEGEEADDDDIYNVLSTLKRLTAFHNAHDLTKWELFGNCYRLLK
SGIELGSMPEQIVVQALQCCHYSILWQLVKTAEGSPTKEEQLGLRKTLKAFCIVCQHCLT
NVNPSVKEQAFMLLCDLLMIFSHQLTTGGRDGLKPIVYSPDTGLQSELLSFVMDHVFIDQ
DEESQSMEGDEEDEANKIEALHKRRNLLAGFCKLIIYDVVDMNAAADIFKHYMKYYNDYG
DIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRSSAHVSGIKELARRFAL
TFGLDQIKTREAVATLHKDGIEFAFKYQNPNGPEYPPPNLAFLEILGEFSSKLLRQDKKT
VHSYLEKFMSEQMMERREDIWLPLISYRNSLLTGGEDDRMSVISGGSSSKASSIRSKKGR
PPLNKRRTEEENVDNSWMNRNDTIQTPGILHPPQLTSTVMRENPRQPAEHNIEDQESERG
SESDFVQNPQMQIPWLGQHKLEEAHRKDRVAMNYMKARGGVRQSVRSHSHSLMEDDAEPI
FEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSTAIMEDDSGFGMPM
F
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgatcactccagagataccagtgttacaggagtcaactaatgaaacaaccattcatccc
gatgttactggtgaattcgaggatccagaggcaaaaggacgcaagcgcagagctcgcggt
cctggcaggcccccgactgctaagaaggcaagacgcattacaggagagaaaggtcgtgca
ggagctggtggtagagcaagtcagggaaaggctaatggtcaccatcagcaaaatggagat
attgagccagttacgctgtttgaggtggtgaaaatgggaaagagtgccatgcagtctgtc
gttgatgactggatagaatcatacaagcaggacagggacattgcacttttggatctaatc
aacttttttatccagtgctcaggatgtaaaggcactgtaagaattgagatgtttcgaaat
atgcagaatacagaaataattaggaaaatgactgaagagtttgatgaggacagtggagat
taccctctaactatgcctggtcctcaatggaagaaattccgaacaaatttctgtgagttt
attggagtactcatccggcagtgtcagtacagtattatttatgatgagtacatgatggat
acagtgatttctctgctaactgggctttcggattcccaagttcgagccttcaggcacacc
agcacattggctgctatgaagctgatgactgcattggtgaatgtggccttaaacttaagt
atacatcaggataacacacaaagacagtatgaggctgagaggaacaaaatgataggcaaa
cgagctaatgataggttggagttgcttttacaaaagagaaaggagcttcaagagaaccaa
gatgagatagaaaatatgatgaactctgtttttaagggtatatttgtgcaccgataccgc
gacgcaatttcggagatccgagcaatctgtattgaagaaatcggtgtgtggatgaaaagt
tacagcgatgcattcctcaatgatagttatttgaagtatgtgggatggacactacatgac
cggcaaggtgaggtgaggctgaaatgtctcaaagctctgcagtcactgtacactaataag
gagctcttcccgaaactagaactcttcaccaacaggttcaaggatcgtattgtatctatg
acattagacaaagagtatgatgttgctgtggaagctatccggttggtcactttgatactg
cagggaagtgaggaggcattgtccaatgaagattgtgagaatgtgtatcacctggtatat
tctgcacatcgtcctgttgctgtggcagctggggaattcctaaataaaaagttgttcagc
agacacgatccacaagcagaagaagcctatgctaagagtagaggaaggcatagtccaaat
gggaatcttattaaaatgctggtacttttctttcttgaaagtgagttgcatgagcatgca
gcctatctggtggatagtctgtgggaaagttcccaagaacttctcaaagattgggagtgt
atggtagaactgctactggaagagcctatacaaggagaggaaggtatgactgacaggcag
gagaccgcacttatagagcttatggtctgtacaattcggcaagctgcagaagcacaccct
ccagttggaagaggaactggcaaaagggtcttgacagcaaaagagaggaaaacgcagata
gatgaccggactaaattgacagagcagttcatagtggcacttcctatgatgttaggaaag
tactcagctgattctgagaaagtggcaaacttattgcaaatccctcagttctttgacttg
gaactctacagtacaggaagaatggaaaagcacctagattcattgttaaaacaaaccaag
tttgttgttgaaaagcacattgaatcagatgtcttagaatcatgcagcaaaacatataac
atcctgtgcagtgaagagtacacaatccagaaccgtgtgaacattgcacgcagtcagatg
attgatgagctggtagagcgattcagtcagtcagttgaagacttattacaggagggagaa
gaagcagatgatgatgacatttataatgttctgtctactttgaagaggttaaccgccttc
cacaatgctcatgatcttacaaaatgggagctgtttggaaactgctacaggcttttaaaa
agtgggattgaacttggatctatgccagaacagatagtggtccaggcacttcagtgctgt
cattactcaattctgtggcagcttgtcaagacagcagaaggttctcctactaaggaagaa
caactgggcttgagaaaaacattgaaagcattttgtatcgtctgtcagcactgtttaaca
aatgtcaacccttctgtcaaagagcaggcattcatgttgctttgtgatctcctaatgata
ttcagccaccaattgacaactggtggtagggatgggctcaagccaattgtttacagccca
gatactgggctacaatcggagttgctcagctttgtaatggatcacgtatttattgatcaa
gatgaggagagccagagcatggaaggagatgaagaggatgaagccaataagattgaagcc
ctccataaaagaagaaacctcctggcaggtttttgcaagcttataatttatgatgttgtg
gatatgaatgctgcagcagacattttcaagcactatatgaagtattacaatgactacggt
gacatcataaaggagacattgagtaaaaccagacaaatcgacaaaattcaatgtgccaag
acacttattctgagtttacagcagctcttcaatgagcttgtccaggagcaaggtcctaat
cttgacagatcatcagcccatgtcagtggtattaaggaacttgctcgtcggtttgccctc
acatttggtctggatcagatcaagacaagagaagccgttgctaccttacacaaggatggc
atagaatttgcttttaaatatcaaaacccaaatggaccagaatacccaccaccaaatctt
gccttccttgagattcttggtgaattctcatctaaacttctgagacaggacaaaaaaact
gttcattcatacctggagaaattcatgtcagagcagatgatggagcgaagagaggatatc
tggctgcctctgatctcttatcgcaactcgttgcttactggtggagaggacgataggatg
tcggtgatcagtggaggcagcagtagtaaagcttcctcaatacgcagtaagaaagggcgt
ccgccactgaacaagaggcggacagaagaagagaatgtggacaactcatggatgaacagg
aatgatactattcagactccaggaatcctgcatcctccacagttgacttccacagtcatg
cgggaaaatcctcggcaaccagcagaacacaacatagaagatcaggaatccgaacggggc
tctgaatctgattttgtgcagaaccctcaaatgcaaataccttggttgggtcaacacaag
ctggaagaagcgcaccgaaaagatcgagtggccatgaactacatgaaagcaagaggtggt
gtaaggcaatcagttcgcagccacagccacagtttaatggaggatgatgctgaaccaatt
tttgaagatgtaatgatgtcatcgaggggtcagttggaagatatgaatgaagaatttgaa
gacactatggttattgatctgcctccatcacgaaacagacgtgaacgtgctgagctcaga
ccagatttcttcgactccactgccataatggaagatgattcgggctttgggatgcctatg
ttctga
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