Scyliorhinus canicula (smaller spotted catshark): 119976102
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Entry
119976102 CDS
T11175
Name
(RefSeq) rho guanine nucleotide exchange factor 26-like isoform X1
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau05100
Bacterial invasion of epithelial cells
scau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119976102
05100 Bacterial invasion of epithelial cells
119976102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119976102
Membrane trafficking [BR:
scau04131
]
Endocytosis
Macropinocytosis
Others
119976102
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119976102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
PH
SOS1_NGEF_PH
SH3_9
RHG20_PH
SH3_2
IQ_SEC7_PH
ECT2_PH
PH_13
PH_BUD3_C
Motif
Other DBs
NCBI-GeneID:
119976102
NCBI-ProteinID:
XP_038672193
LinkDB
All DBs
Position
13:150444368..150677943
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AA seq
749 aa
AA seq
DB search
MDKMDQESEVDLSNLAITPLWRKRRSIPKLPNTRSLNRRSRSRPSSYQIDGILVTDFPVD
GNVPTRNGNVPPDPDGRPLLQRQPSTHSLPTPDKPHLVLSTNSTVSLKNGTQQIIPKDLA
SGIKIKNHHQNNQILEVGTRSRRVQSMVEPLTAPLVPKRELGGDMDPELESPGQLRRGLR
STSYRRAVVSGIHFDKTSSLKTNNRRSQPNLKTVLEDKEKFCTLGRGKEYEKKQLPAQGP
FDGEENAVLYQNYKEKALTLNNGDSDEDSDQNVQAEGQKSDDRIIVQFKPIRCSWSQLSV
VKKSGILQTVTQEEKKRQEAIFEVISSEHSYMLSLEILIRMFKDSDALNLTMTKTERHHL
FSNIVEVYKSSNKFFKELEARYQQNALIPDISDIVEKHATSTFDPYVTYCSNEVYQQRTL
QKLLNTNPSFKEILTRIEAHPECRNLPMISFLILPMQRVTRLPLLMDTICQKTPKESPEN
ECTKKALQAVSKLVRQCNEGARRMERTEMMYTINSQLEFKIKPFPLVSSSRWLSKRGELM
GFVEDTGIFSKRMSKQQVYFFLFNDVLIVTKKKSEDSYSVTDYAMRDLLQVEPCEAEELN
LSPMKTAPGMLYSRQSSFNHLFRLTMLSNHAGEKVVMVFGAESPSDCARWFTALGQKSAE
RQHPDRTTLTQVEITRTYPAKQPDELSLQVADVVLLYQSVEDGWYEGERLRDAEIGWFPM
ECAKVITCQATISKNMQRMGRLLGVETNV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggataagatggatcaggagagtgaggttgacctgtccaatcttgccataactccactg
tggcggaagaggagatcgattcccaaattgcccaatacgaggtctttgaaccggcgcagc
aggtcaaggccatcctcgtaccagatcgatggcatcctggttacggattttccagtggac
ggaaatgtccctacccgaaacgggaacgttccccctgatcccgatggccgacccttgctc
cagaggcagccctccacccattcgcttccgacacccgataagccccaccttgtcctgagc
accaacagtaccgtttctttgaagaacggaacccagcagatcattcccaaggacttggcg
tcgggcattaaaatcaagaaccaccatcaaaacaatcagattctggaggttggtacgaga
agtcggcgggtacagagtatggttgagcccctcactgccccgcttgtacccaaaagggaa
ctggggggagacatggaccctgagctggagagtccaggacagctccggcgagggctgcgg
tccacttcatatcgaagagcagtggttagcgggattcattttgacaagacgtcgagtttg
aagaccaacaaccggcggtcccagcccaatctcaagaccgtcctcgaggataaggagaaa
ttctgcaccttgggcagaggaaaagaatatgagaagaagcagctgcctgcgcagggcccg
ttcgatggggaagagaacgcggttctttatcagaactacaaagaaaaggctctgacgctg
aataacggcgattctgatgaggattcggatcagaacgtgcaggcagaggggcagaagtca
gatgatagaataatcgtgcagttcaagccaatcagatgctcgtggagccagctctctgtg
gtgaagaaaagtggaatattacagacggtcactcaggaggaaaaaaagaggcaggaggct
atttttgaagtgatttcatcggagcactcctacatgcttagcctggaaatcctgatccgc
atgttcaaggattcggatgcactgaacttaaccatgaccaaaaccgagaggcatcatctg
ttctccaacatcgtggaggtctacaagtccagcaacaagttcttcaaggaacttgaagcc
aggtaccaacagaatgctctgatacctgacatcagtgacattgtggagaagcacgccacg
tccacctttgacccctatgtgacgtactgctcaaatgaggtctaccagcaacgcacgctt
cagaaactcctaaatacgaatccgagcttcaaagaaattctgaccaggatcgaagcccac
cctgagtgccgaaacctgcccatgatctcatttcttatcctcccgatgcagagagtcaca
aggcttcctctactgatggatacaatttgccagaaaacgccgaaagaatccccagagaac
gagtgcacaaagaaagcgttgcaagctgttagcaagctggtgcgtcagtgcaatgaaggg
gcaaggcgaatggagcgaacagagatgatgtacaccatcaacagtcaactggagttcaaa
ataaagccatttccgctagtctcttcctctcggtggctgtccaagcgaggtgagctgatg
ggattcgtcgaggacacagggatattttccaaacgcatgtcaaagcaacaagtgtatttc
ttcctgttcaacgatgtccttatcgtcacaaagaagaaaagcgaggacagttacagtgtg
accgattacgccatgagggatttactgcaggtggaaccctgtgaggctgaggaactaaat
ctatctcccatgaagacagctcctggcatgttgtattcccggcagagttccttcaatcac
ctctttcggctcaccatgctcagtaatcatgctggagagaaggtggtgatggtctttgga
gcagaatcaccgagcgactgtgcacgttggttcactgccctgggacagaagagcgctgag
agacaacacccagacaggacaaccttaacacaagtggagatcaccagaacgtacccagcc
aaacaacctgatgagctgtctctgcaggtagcagatgtggtcctcctataccagagtgta
gaggatggctggtatgaaggagagcgtttgcgagacgccgagataggctggtttccaatg
gagtgtgccaaggtcatcacctgccaagctacgatcagcaagaacatgcaacgtatgggc
cgcctgctgggagtggaaacaaatgtctaa
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