Scyliorhinus canicula (smaller spotted catshark): 119976128
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Entry
119976128 CDS
T11175
Name
(RefSeq) rho guanine nucleotide exchange factor 4-like isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119976128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119976128
Membrane trafficking [BR:
scau04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119976128
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
Herpes_MCP
Motif
Other DBs
NCBI-GeneID:
119976128
NCBI-ProteinID:
XP_038672242
LinkDB
All DBs
Position
13:71967544..72043302
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AA seq
513 aa
AA seq
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MSSLFNCVRLIINAWYGENEQPSEIGDESWELHSQSISKPESLALETSKDNIESHNNLII
SEMLQSLSILEQKESTIVKKHRAMRHGGKLIRGLSEVFELDSYERGTVELLNETAEEKPP
PPTVPPASKYSPLEQRRGHVVNEIIKSEREYVKNLRDIYEGYYKQCQKTKDLFPHARMDT
LFSNIVDIYKTHKKLLNCLEWTYRASKPHLSEFGSCFLDNKEGFLQYAVYCNNHVNALSE
WAKLIVVEKYAYFFEVCRRHQHMMSLPFDGFLLMPVQKICKYPLLLTELLKATPPEHRDY
KNVEAAVVAMKDVLNAINSQKGEDETEDKILKLQRTILNWQGEDLSVMSTQLLQRGDLIV
IPRPRARAKHVFALLFDHQMILCKKDLLKRNTLYFKERIKMDTGMVKDLDDGKDVEFDCK
VRNAIKVTSKFPDKPSKLFFTKNLADKQLWLHAFEEERQISEGELDADASYYDFPALNVS
TVTQEQLSFLAQPKRRQASFWRKFSNKAGSGKD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctttttaactgtgtcagattgataataaatgcatggtatggagaaaacgaa
cagcccagtgaaatcggggatgaaagttgggagctgcacagtcaatcaatatcaaaacct
gaatctctggccctggaaacatcaaaagataacatagagtcgcacaataacctgataatc
tcagaaatgctgcaatccctgtcaattttagaacagaaggaatccacaatagtgaaaaag
caccgtgccatgcgtcatggcggcaaactaatccgcggattaagtgaagtctttgagcta
gatagttatgagcggggaacagtcgaactactcaacgagactgcagaagaaaaaccgccg
cctcctacagtaccaccagccagcaaatattcaccactggagcaaaggagaggacatgtt
gtcaatgagatcataaagtcggagagggagtatgtcaaaaacttacgtgacatctatgag
ggttactacaaacagtgtcagaaaacaaaggacttgtttccgcatgcccgaatggatacg
ctcttttcaaacatcgtggatatttacaaaacacataagaaattgcttaattgtctggag
tggacttacagggcaagcaaaccacacttgagtgagtttggctcctgttttcttgataat
aaagaaggtttcttgcagtatgctgtatattgtaacaaccacgtcaatgctctttcagaa
tgggcgaaactcatagtagttgaaaaatatgcctacttttttgaggtctgtcgaaggcac
cagcacatgatgagccttccctttgatgggtttctgttaatgccagtacagaagatctgt
aaatatccgctactgttgacagagttgcttaaagccaccccacctgaacacagggattac
aagaatgtcgaagctgctgtagtcgccatgaaggatgtcctgaatgcgattaattctcaa
aagggagaggatgagaccgaagataaaatcttgaaattacaacgaactattttaaattgg
cagggtgaagatctttcagttatgagcactcaactgctccaacgtggtgatctaattgtt
attcctcgtcctcgtgccagggcgaagcatgttttcgctttactctttgaccatcagatg
attttatgcaagaaggacctgttgaagcgtaatacactgtacttcaaagagaggatcaag
atggacactggaatggtgaaggatttggatgatggaaaggacgtggaattcgactgcaaa
gtcaggaatgcgatcaaagttacgagcaagtttccggataagcctagcaaactttttttt
acaaagaatctcgcagacaagcagttatggcttcatgcctttgaggaggagagacaaata
tccgaaggcgagctggatgcagatgcgagctactatgactttccggcactgaacgtttcg
accgtcacacaggaacaattgtccttcttggctcagcccaaacgcaggcaagccagcttc
tggcgcaagttctcaaacaaggcaggatcgggtaaagattga
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