Scyliorhinus canicula (smaller spotted catshark): 119976272
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Entry
119976272 CDS
T11175
Name
(RefSeq) transient receptor potential cation channel subfamily V member 5-like isoform X1
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119976272
Ion channels [BR:
scau04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119976272
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GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
Ion_trans
YopA_M
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119976272
NCBI-ProteinID:
XP_038672602
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All DBs
Position
13:complement(101092252..101269434)
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AA seq
701 aa
AA seq
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MAAFRKAIDCFLNRLKNPTSPTQSASKDSASDKVGLGGRQKNFNNVFEVKNRGTESPLFK
AARENDVETLKNLIQEKNVDPYERGSVGETVLHVAALYNSKEAAIILLNAFPFLIDEPID
CEMYKDDLSSGETALHIAVVNQNVDLIKELLALNADIKHSRAVGTFFTPGKDCRCYYGEY
ALSFAACIGNEQIVKMIVAHGAPLNAQDKQGNTVFHMLVLHPNKSMACRMYNFISSLISK
EKIEYLENITNKDGLTPMKLSAFEGDVAMFSHFMKKRKQIYWAFGPVSSTLYDLTGIDTW
GDELSVLDILCSSKKKEARKLLKITPVKEVLHQKWTNYGFKYFLLWTALYFLYTIIFTVC
CVYRPLTPAGPNGDNITIMVPKPLNEAYATAEDFARLAGEILTVVGAILILVTEIPRLIH
IGPAKYFGNTVTGGPFHITMIVYACFVLITMILRVLNHEWETVIMAYALISAWCNVLYFA
RGFKLLGPLCIMIQKMIFGDLMRFCYVLIIVIIGFGAGFDVHFQALDPNTYLYFRDFTIT
IFTLFQLMMGLTELPGPPDIKIPDIIIVLYMVYMCFGFVLLLNLFIALMGDTHYRVVSER
KSLWKAQIAATTLLLERRLPAWLWPRAGIPGDLLGLNVEKWYLRVEERSDYQKARKKSEN
EEKENVTHPRKNRSAYRWKLIHKNISKSLKKNEDACDMTTL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggctgcattcagaaaagcaattgactgtttcctcaacagattgaaaaacccaacttca
cccacccagtcagcatccaaggacagtgcttctgacaaagttggactgggaggccggcag
aagaactttaataacgtgtttgaagtgaaaaatagaggaacagaaagtcccttattcaaa
gctgcaagagaaaatgatgttgaaaccttgaagaatttaatacaggaaaaaaatgtagac
ccttatgagagaggttctgttggagaaactgtgttgcatgttgcagcattatataacagt
aaggaagctgcaattatattgctcaatgcctttccattcttaattgatgaacccattgac
tgtgagatgtacaaggatgatctgtcttcaggtgaaactgcactgcacattgcagtggtg
aatcagaatgtggatcttattaaggagctgctggcactaaatgcagacataaaacattct
cgtgctgtagggacgtttttcactccaggaaaagattgtcgatgttattatggggaatat
gctttatcctttgcagcctgcataggaaatgaacaaatagttaaaatgattgtggcacat
ggagcacctttaaatgcacaagataaacaaggtaacactgttttccacatgcttgtgctg
cacccgaacaagagcatggcctgcagaatgtacaattttatttcatcacttatatccaag
gaaaagattgagtacctagaaaatatcaccaacaaagatggactcactcccatgaagctg
tcagcatttgaaggggatgtagcaatgttcagtcatttcatgaagaagaggaagcagatt
tattgggcttttggaccagtatcatccaccttgtatgatctcacaggaattgatacctgg
ggtgatgaactctccgtgcttgacatcttatgctctagcaagaagaaggaggctcggaaa
ttattaaagattactccagtgaaagaagtgcttcatcaaaagtggactaattatggcttc
aagtatttcttgctgtggactgcactttactttttgtatacaatcatattcaccgtttgc
tgtgtgtaccgtcctcttacaccagctggtcctaatggggacaacatcaccattatggtt
ccaaaaccactgaacgaagcctatgctactgctgaagattttgctcgattggcaggagaa
attttgacagttgtgggagcaattctgatcctagttactgagattccacgactaattcac
ataggaccggcaaaatattttggaaacacagtaactggaggtccttttcacattacaatg
attgtttatgcttgctttgttctaatcaccatgatactaagagttttgaaccatgaatgg
gaaacagttataatggcgtatgctctgataagtgcctggtgtaatgtcctttactttgca
cgcggattcaagttgcttggtcccctgtgcatcatgatacaaaagatgatctttggtgat
ctcatgaggttttgttacgtactgataattgtcattataggatttggtgcaggtttcgat
gtacactttcaagccttggatccaaatacttatttgtacttcagggattttaccatcact
attttcacattgtttcagctgatgatgggcctcactgaacttccaggtccacctgacatc
aagatccctgacattatcattgtcctctatatggtgtacatgtgttttggctttgttctt
ctcctgaatcttttcattgctttaatgggtgacactcattatcgagtcgtcagtgaacga
aagtcactgtggaaagctcagattgctgcaaccactcttctacttgagaggagactgcca
gcctggctgtggcctagagcaggaataccaggggatctgttgggtctcaacgtggaaaag
tggtacttaagggtcgaagaaagaagtgactaccaaaaggcaagaaagaagtctgaaaat
gaggagaaggaaaatgtaacccacccaaggaaaaatcggagcgcctatcgttggaaactc
atccataaaaatatttcaaaaagtcttaaaaagaatgaagatgcatgtgatatgactact
ttgtaa
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