Scyliorhinus canicula (smaller spotted catshark): 119976288
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Entry
119976288 CDS
T11175
Symbol
her6
Name
(RefSeq) hairy-related 6 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03460
Fanconi anemia pathway
scau04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119976288 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119976288 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119976288 (her6)
03400 DNA repair and recombination proteins [BR:
scau03400
]
119976288 (her6)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
119976288 (her6)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
119976288 (her6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
119976288
NCBI-ProteinID:
XP_038672635
LinkDB
All DBs
Position
13:115310685..115384890
Genome browser
AA seq
341 aa
AA seq
DB search
MPADIMEKSSSSPVAATPASLNATPDKPKTASENRKVNTFAISYIAPKTQLCYCYFMKHP
FFRFFLQSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLR
NLQRVQMTAALSTDPTVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLSHLANCMSQ
INAMNYTQPPPSPAVNGGSHTAFGQPLHIQLPGSGASGLPLNGVNMPCKLAAAEAMPAVA
AATKVYGGFQLVPASDGQFAFLIPNTAFGPNGQLSAGPVIPLYANTNASALPSAISPASR
SPIQQSGNGPVTGFPLPLSAATTAVSVGAPTDSSDSVWRPW
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagatataatggagaaatcatcttcttctcctgtggctgctaccccagctagt
ttaaacgctacaccagataagccaaaaactgcatctgaaaatcggaaggtaaatactttt
gccatctcatacatagcaccaaaaacacagttatgttactgttacttcatgaaacatcct
ttctttcgtttttttctacagtcatccaaaccaattatggagaagaggcgccgggcgagg
ataaatgaaagtttaagtcaacttaaaactctgatcctggatgcgctgaagaaagatagt
tcgagacattcaaagttagaaaaggccgacatcctggaaatgacagtgaaacatctccga
aatctgcagcgcgtccaaatgactgctgctttgagtacagatccaacagttctgggaaaa
taccgagccggtttcagcgagtgtatgaacgaagtgacccgattcttgtccacatgcgaa
ggggttaatacagaagtccggaccagactcctcagtcatttggcaaactgcatgtctcag
atcaacgccatgaactacacccagcctccccccagcccagctgtgaacggcggctctcac
actgctttcgggcagcccttacacatccagctcccgggatcaggggccagcggtctgccc
ctgaacggggtcaacatgccctgcaaactggctgctgccgaggcaatgcccgcggttgct
gcagccacgaaagtgtatggcgggttccagcttgtgccagcatcagacggccagtttgca
ttcctcattccgaacacggcttttggacccaatggacagctatcggcaggaccggtcatc
cctttatatgccaataccaacgcgagtgcattgccctccgccatctccccggccagtagg
agccccatacaacagtctgggaatggcccagtaaccggcttcccgcttcctctttcggct
gccaccactgctgtcagtgtgggcgcaccaacagattcctcagattccgtctggagaccc
tggtaa
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integrated database retrieval system
