Scyliorhinus canicula (smaller spotted catshark): 119976375
Help
Entry
119976375 CDS
T11175
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12015
tripartite motif-containing protein 39 / bloodthirsty-related gene family protein [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119976375
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119976375
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119976375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
PRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-B_box
zf-Nse
RING_XB3-XBAT31
zf-RING_6
Fib_alpha
zf-RING_10
Prok-RING_4
Sina_RING
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
119976375
NCBI-ProteinID:
XP_038672803
LinkDB
All DBs
Position
13:26381572..26421006
Genome browser
AA seq
470 aa
AA seq
DB search
MASPSSPTSPTFSPSSCSNLKSDLTCSVCLDYFQDPVLTRCEHTFCRRCVLKFWGQQRRN
ICPVCRKICPTDHLLRNRALAGVLESLRRREDVQLCGQHHQQRSLYCHQDQELICCQCRD
TPRHHTHQVVGIEEAMAQYKEEIESTLKSLQDRGTKCEGLKTKSEKYMAKLQDWARQTEC
QIKNTFRKLHVYLNDEESYLIQQVRQEERDSNCKLQNMTEEVFQELRVLRNNIQEIERQM
KDGVLNLKGLKDIQTRLTNTLPTPVLIMHKVPFGKFSGPMEYRVWKKLRRLLDTVPAAMT
LDPDTAHPNLVISADGTSLRLADAQLAHTACSKVSLEPCVLASEGYTSGCHYWEAEVSGE
GWALGVGSRSALHDGRLALTPQSGNWPLTFRNGEYECFYPLHTLPAADKPRRIGVFLNLE
RGYLSFYNAEDMSHIFTVPSKCSEQLYPCFVPPSSGKAMSVARSERWEPQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcatccccctcctcacccacctcccccaccttctccccctcctcctgcagcaacctg
aagtcggacctgacctgctcggtgtgcctggactatttccaggacccggtgctgacccgc
tgcgagcacaccttctgccgccgctgcgtgctgaagttctggggccagcagcggcgcaac
atctgcccggtgtgccgcaagatctgccccaccgaccacctgctgaggaaccgggcgctg
gccggcgtcctggagtcgctgcgccgccgcgaggacgtgcagctgtgcggccagcaccac
cagcagcgcagcctgtactgccaccaggaccaggagctcatctgctgccagtgccgggac
accccgcgccatcacactcaccaggtcgtcggcatcgaggaggccatggcccagtacaag
gaagaaattgaaagtacactgaagtcccttcaggacagaggaaccaagtgcgaaggcctg
aaaacaaaatcggagaagtacatggcaaagttacaggactgggcacggcagactgagtgt
cagatcaagaacacgttccgcaagctccatgtctacctgaacgatgaggagagctacctg
attcagcaagtgaggcaggaggagcgagactccaactgcaagctgcagaacatgaccgaa
gaggtgttccaggagctgagagttctgcggaataacatccaagaaatcgagaggcagatg
aaagacggtgtcctcaatctaaagggtctaaaggacatacaaacaaggctgaccaacact
ctacccactccggtgctgataatgcacaaggtgccattcgggaagttttcgggacccatg
gaatacagggtgtggaaaaagctgaggaggctgctggatacagtgccagctgccatgacc
ttggacccggacacggcccacccgaacctggtcatctcggcggatgggacctcgctgcgg
ttggccgacgcccagctagcacacaccgcatgcagcaaggtcagcctggagccctgcgtc
ctggcctccgagggttataccagtggctgccactattgggaggcggaggtgtcgggtgaa
ggctgggctttgggggtgggcagtcgctcggcgctgcacgacggccgcctcgccctgaca
ccacagagcgggaactggccactgaccttccgcaacggggagtacgagtgcttctaccca
ctgcacacgctgccagccgcagacaagcctcggcgcattggcgtctttctgaacttggag
cgcgggtacctgtcgttctacaatgccgaggacatgtcacacatcttcaccgtgcccagt
aaatgttccgagcagctctatccttgcttcgtgcccccctcatctggcaaagccatgtcc
gtcgctcgctctgagcgctgggagccgcagtga
DBGET
integrated database retrieval system
