Scyliorhinus canicula (smaller spotted catshark): 119976388
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Entry
119976388 CDS
T11175
Name
(RefSeq) rho guanine nucleotide exchange factor 9-like isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119976388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119976388
Membrane trafficking [BR:
scau04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119976388
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
119976388
NCBI-ProteinID:
XP_038672821
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All DBs
Position
13:72072346..72252903
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AA seq
807 aa
AA seq
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MNTQSTSSYNEKAISEEADSVIFNDIPVEPLPNMQQSGKQLDYNNPKEQVLTTELKMKTV
RAPRPRSPIGMPSTVDDPYKMKYQDHVYQLIKPRTIAKDVQKPELSEQKIDHADEQPKSI
GKIKRSPTQKPRSGETGHLAQQQEDEHKQNENIKKKAKTRHNLPKQPEPSKGKLNPEENI
YDTVAGSPKWEEEHIYDTVAGGPKQQKEHIYDTVAGGPKRQEHIYDTVAGGPKRQEHIYD
TVAGDSNWSEEHIYDTVAGDSNLSEEHIYDTVAGDSNLSEEHIYDTVAGDSNWSEEHIYD
TVAGDSKRSEEDIYETIGAHSHTGKKSTVKKQLGYDEDKNDYVFYGEYSESQSVPMQPQA
ICPAEEKKNNYRNHVVNEIINVERNYVKNLKDICEGFYKQCRKKPQMFSQERLFTIFSNI
EQIYRFQKKFLKCMDNAYNSVQPFLTDFGRCFLDHHESFLIYSEYCSNYPSAYSEISKLM
KIQDYALFFETCRLHQRMLNLSIDAFMIMPVQKICKYPLQLMDLLKSTTPCHTDYKALEA
AITAMKNVANVINERKRRIENLDKLPRWQNTVVNWKGEDVMDRSSELIQSGELIVIMKPQ
GKSKDMILFLFDHQAILCKKDLLRRDMLYYKNRIDMDNVLVIDVNDGKDWEFNVKVKNAF
KFQNRLVDDDVQLFCAKKSSEKLLWLHAFDDERKLVRNDEDSGFVITEAQKQKAKILSKK
PMKKKRGDFADIKYINRIYKQRNRCPMVSECERLPIKAPTCPHQHNNPTMPPMTSSSSSS
STSTTDSSTSLDLETESDAISNRSFQL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccagtctacaagttcctacaatgaaaaagcaatttctgaagaagcagactca
gtcatattcaatgacatcccggttgaaccattaccaaatatgcaacaatctggaaaacag
ctcgattataataacccaaaagaacaagtattgacgacagaattgaagatgaaaactgtg
agagcaccaagacctcgatcccctataggcatgccatcaactgtggatgacccatataag
atgaaatatcaggatcatgtatatcaactgattaaacctagaaccatagccaaagacgta
cagaaacctgaattatctgaacaaaagattgatcatgcagatgagcaacctaaatcgatt
ggaaaaattaagcgtagtccaacacaaaaacccagatcaggagaaacaggccatttggcc
caacagcaggaagatgagcacaagcaaaatgaaaacattaagaaaaaagcaaagaccaga
cataatttaccaaagcaacctgaaccatcgaaaggcaagctgaatcctgaagaaaacatt
tatgacacagtggcaggaagtccaaaatgggaagaagaacacatttatgacactgtggca
ggaggtccaaaacagcaaaaagaacacatttatgacacagtggcaggaggtccaaagcga
caagaacacatttatgacacagtggcaggaggtccaaagcgacaagaacacatttatgac
acagtagcaggtgactcgaattggtcagaagaacacatttatgacacagtggcaggagac
tcgaatttgtcagaagaacacatttatgacacagtggcaggagactcgaatttgtcagaa
gaacacatttatgacacagtggcaggagactcgaattggtcagaagaacacatttatgac
acagtggcaggagactcaaaacggtcagaagaagacatatatgaaacaatcggagcacac
agtcacaccgggaagaaatcaacagtgaagaagcagttagggtacgatgaagataagaat
gattatgttttctatggcgaatacagtgagagccagtctgtcccaatgcaacctcaggca
atttgtccagcggaggaaaagaaaaacaactacagaaaccatgttgtcaacgagatcata
aacgtagagagaaactatgtcaagaacttaaaagacatctgtgagggtttctacaaacaa
tgtcggaaaaaacctcaaatgttctcacaggaacggctgttcaccatcttttcaaacatc
gagcaaatttacagattccagaagaagttcctgaaatgtatggacaatgcatacaattca
gtacaaccattcttgactgactttggccgctgcttcctcgatcatcatgaaagtttcctg
atctactctgagtactgcagcaattaccccagtgcttattctgaaatctccaaactcatg
aagatacaagattatgcgttattttttgagacctgccgattgcaccagcgtatgttgaac
ctctccattgatgcatttatgataatgccagttcagaagatctgtaaataccctttgcag
ctgatggacctgctgaagtccaccacaccctgtcacacggattacaaagccctggaagct
gccataacagcaatgaagaatgttgccaatgtgattaacgaacgcaagagacgaattgaa
aaccttgataaactccctcggtggcagaatacagttgtgaattggaagggagaagatgtt
atggaccgtagctcagaactaatccaaagtggtgaattaattgtgatcatgaagccacaa
ggcaagagcaaagacatgatacttttcctctttgaccaccaagcaatcttatgtaagaag
gatcttctacgtcgtgacatgttatactacaagaacagaatagacatggacaacgtgctc
gtgatagacgtaaacgatggcaaagactgggaattcaatgtcaaggttaaaaatgctttc
aaatttcagaacaggcttgtagatgatgacgtgcagctgttctgtgcaaagaaatcctca
gagaagctgttgtggcttcatgcctttgacgatgaaagaaaactagttagaaatgatgag
gattcaggttttgtcatcacggaagcccaaaagcagaaggcaaaaatactttcaaaaaag
ccaatgaagaagaaaagaggtgattttgctgatattaaatatataaatcgaatatacaaa
cagcgcaacagatgcccaatggtttccgaatgtgagagactgccaataaaagctccaaca
tgtcctcatcaacacaataatccaacaatgcccccgatgacttcctccagctcctcatca
agtacaagcaccacagattcgtcaacatcgttagatctggaaacagaatcagatgcgatt
tcaaaccgcagctttcaattatga
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