Scyliorhinus canicula (smaller spotted catshark): 119976420
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Entry
119976420 CDS
T11175
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119976420 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scau01007
]
119976420 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119976420 (vars1)
Enzymes [BR:
scau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
119976420 (vars1)
Amino acid related enzymes [BR:
scau01007
]
Aminoacyl-tRNA synthetase
Class I (U)
119976420 (vars1)
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119976420 (vars1)
Prokaryotic type
119976420 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1_2
GST_C
Val_tRNA-synt_C
tRNA-synt_1g
GST_C_2
Snapin_Pallidin
HH_AprE
DNA_topoisoIV
Arc1p_N_like
AcrIC5
HAUS1
Motif
Other DBs
NCBI-GeneID:
119976420
NCBI-ProteinID:
XP_038672874
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All DBs
Position
13:complement(2277928..2349569)
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AA seq
1006 aa
AA seq
DB search
MASSALYVSPHPHNFQNAKVLVALEYGRSKTRVVEIRGPAAGDTRSQLAMSRFPSLETES
KLCIYGATAVAHYLAPYRMRGSSGKEASLVQQWVNFADSELLQPACAWVFPVLGLLKHNK
KDVERAQLDLKKILLFLDEHLRLRTYLVGEGVTLADIAVSCSLLLPYKHVGLKPSLGRGF
LTARKGDRIYHQLRKLGSSLDWDRACFTMDPKLCQAVEEAFIRLHDEGVIYRSTRLVNWS
CTLNSAISDIEVDKKELTGRTLLPVPNYAEKVEFGVLVSFAYKIDGSDDEEVVVATTRIE
TMLGDSAVAVHSQDPRYQNLKGKFVVHPFCDRKMAILFDDFVDMDFGTGAVKITPAHDQN
DYEVGMRHGLEFINIMDDNGYLINVPEPFLGMKRFDARKAVLEALIQKGLFKDVKENPMV
VPVCSRSKDIVEPLLKPQWYVRCAEMAKMAADVVRNGDLKIIPETHLKTWFNWMDNIRDW
CISRQLWWGHRTPAYFVTVSDPSVPAGEDADGNYWVSGQTEEIARRKAARKFSVSPDQIS
LRQDEDVLDTWFSSGLFPFSIFGWPNETDDLKAFYPGTLLETGHDILFFWVARMVMLGLK
LTGKLPFKEVYLHAIVRDSHGRKMSKSLGNVIDPLDVIFGITLEGLYAQLLESNLDPVEI
ERAKAGQKSDYPDGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
AIRGLGENFTPEIAVQDPSRGSLIDRWVLSRLSHAVELCNRGFRQYDFPGVTTATYNFWL
YELCDVYLECLKPVFGGSDENAAHVARNVLYTCLDVGLRLLSPFMPYVTEELYQRLPRRS
SQEPPSITVTPYPECEQMQGVFSNTFSSTHTSKRKTGYLTCSDENTAALVNMFSSYIQTL
SSSKSVSILVHEECPAGCALAIASDRCTVHLMLKGLIDAEKEVLKLRNKQSDVQKQVAKL
REKLTKTDYQTKVPQKIQEMDSEKLKQIETELQKVEDGIKTFEKLI
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcggcactctacgtctcgcctcacccccacaacttccagaacgccaaggtc
ctcgtcgcgctggagtacggaaggtccaagacgagggtggtagagatcagagggcccgcc
gcgggggacacccgcagccaattggcgatgtccagattcccgtcgctggaaaccgagtcc
aagctgtgcatctacggagccacggccgtggctcactacctggctccgtacaggatgagg
ggctccagcgggaaggaggcctccttggtccagcagtgggttaacttcgcagacagcgag
ctccttcagccagcctgtgcttgggtgttcccagttctgggcttgctgaagcacaacaag
aaggatgttgaacgtgcccagctggacctgaagaagattctgctgtttctggatgagcac
ctgaggttgcggacgtacctggtgggggagggcgtcaccctggccgatatcgcagtcagc
tgctcgctgctacttccctacaagcacgtaggtctgaaaccttcccttggccgaggtttt
ctaactgcacggaagggcgaccggatctaccatcagttgcggaagttgggctcatctctc
gactgggaccgagcctgcttcactatggatcctaaactctgtcaggcagttgaagaagct
tttatcaggctccacgatgaaggggtgatctatcggagcacccggcttgttaactggtcc
tgcaccctcaactctgccatctctgacatcgaggtggacaaaaaggagctgacgggacgg
acgctccttcccgtgcccaattacgcggagaaggtggagtttggggttctggtctccttt
gcgtataaaatcgacgggtcggatgatgaggaggtggtggtggcgaccacccgtatcgag
accatgttgggggacagcgctgtggccgttcactcgcaggatcccagataccagaatttg
aaaggaaagtttgtcgttcatcctttctgtgaccggaagatggccattctctttgatgac
tttgtggacatggattttgggacaggtgctgtaaagatcaccccagctcacgaccagaac
gattacgaagtgggtatgagacacggtcttgagttcatcaacatcatggacgataacggc
tatctcatcaatgttcctgagcctttcttgggaatgaagaggtttgatgctcggaaagct
gtactggaagccctgatacagaaagggctcttcaaggatgtgaaggagaacccaatggta
gttcctgtctgcagccgttccaaggacatcgtggagcccctgttgaagcctcagtggtac
gtgcgctgcgccgaaatggctaaaatggcggctgatgtggtgcggaacggagatttgaag
atcatccctgagacgcatctcaagacctggtttaattggatggacaacatcagggattgg
tgcatttcccggcagctgtggtggggccaccgtaccccggcgtactttgtgacagtgagc
gatccctccgtcccagccggagaggacgctgacgggaattactgggtgagcggtcagaca
gaggagatcgccaggcggaaggcggccaggaaattcagcgtctctccggatcagatctcg
ctccgacaagatgaagatgttctggatacttggttctcgtcaggcctgttccccttctcc
atcttcgggtggccgaacgagacagacgatctgaaagccttctacccgggcacgttgctc
gagacaggccacgacatcctcttcttctgggtggccaggatggtaatgctgggtttaaag
ctgacaggaaaactgcctttcaaagaggtctaccttcacgccattgtccgcgactcgcat
ggccgcaaaatgagcaaatctcttggcaacgtcattgacccccttgatgtgatcttcggg
atcacactcgagggtctgtacgcacagctcctggagagtaacttggacccagttgagatc
gagcgagccaaggcgggtcagaaatcggattatccggatgggattcctgaatgtgggacg
gatgccctgcgttttgccctgtgcgcctacacatctcaaggccgagacatcaacctggac
gtcaaccgtatccttggttaccgccacttctgtaacaaactgtggaacgccaccaagttt
gccatccggggcctgggggagaacttcacgccagagatagctgtccaggacccgtcacgc
gggagcctgatcgatcgctgggtgctgagtcggctgagccacgcggtggaactctgcaat
cgcggcttccggcagtacgatttcccgggcgtcactaccgccacctacaacttctggctg
tacgaactctgcgacgtctacctggaatgcttgaagccggtgtttggcggctcggatgag
aatgcagcgcacgtcgcccggaatgtgctgtacacctgtctggacgttggcttgcgcctc
ctcagccccttcatgccctatgttacagaagaactctaccagaggttaccacggcgatcg
tcacaggaaccccccagtatcaccgttaccccttatccagaatgtgaacagatgcaggga
gtcttcagcaacaccttttcctcaacccacacctcgaaacggaagacaggctacctgacg
tgctcggacgagaacacggctgccctggtcaacatgttctcctcctacatccagaccctg
tcgtcctccaagtcggtgagcatcctggtgcacgaggaatgcccagccggctgtgccttg
gccatcgcctctgaccggtgcaccgtccacctaatgctgaagggcctgatagatgctgaa
aaagaagtcttgaaactcaggaacaagcagagcgatgtacagaaacaggtcgcgaagctc
agggagaaactcaccaaaacggattaccagaccaaagtgcctcagaaaatccaggagatg
gattcggaaaagttaaagcaaatcgagacggaactgcagaaggtggaagatggcatcaag
acctttgagaagctgatctga
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