Scyliorhinus canicula (smaller spotted catshark): 119976508
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Entry
119976508 CDS
T11175
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119976508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119976508
Ion channels [BR:
scau04040
]
Ligand-gated channels
Serotonin (5-HT3)
119976508
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119976508
NCBI-ProteinID:
XP_038672981
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All DBs
Position
13:154330670..154360919
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AA seq
467 aa
AA seq
DB search
MALGGYTVLGFRADWKSFCLSVTFICLFQVNLSNLSLSDSDGVRFTKTFAEVFENSAFRP
VKNFSQTLDINITINLHAILGLDEKQEILTTYIWMEQSWFHDFLVWDPSDFSGKEFVALP
KEKLWIPDTLMLEMVDEDKSPELLYLYVHHTGKVIYGRPLRIVSSCNLNILYFPFDIQKC
PLSASPITLRDYDVKLHLEQTSEEVTSKSTKIFASKGEWELIQIEASEKKFLDDWASYDY
VSWEVTIKRRPMFYIVNLLIPSAFLMATDIMSFYLPTHSFDRASFKMTLMLGYSVFLIIV
KDLLPSNSTHTPLIAIFFLVSLTFMVTSLFETIIVINVIHQNGKQRKAVPPWLRTIVLVY
GAKLFWRKGKQRVYHQMSRLPQNVSITDQDCEVKRSWPPEIETLQALLRKIAEGVEEIKQ
CVERHDQEQEMEDEWLQIGHILDCFLHSVYLVFFTAFLLTLSIAWLM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctctcggtggctacactgttctcggcttcagggctgattggaaatccttctgtctg
tctgtaacgttcatctgtctgtttcaggttaacttgtccaacctcagcctctctgactca
gacggagtacggttcacaaagacgttcgctgaagtttttgaaaacagtgcatttcgcccg
gtgaagaatttcagtcaaacattggacattaacatcaccattaacctccacgcgatactg
ggcctggacgagaaacaagaaattctgacgacctacatctggatggagcagagctggttc
catgatttcttggtctgggacccatcggatttcagcgggaaagaatttgtagctttgcca
aaggagaagctctggattcctgacacactcatgctggagatggttgacgaggataagtca
cccgagctgctgtacctgtacgtgcatcacacggggaaggtgatctatggaagacctctg
aggattgtcagctcctgtaacctcaacatcttgtacttcccatttgacattcagaaatgt
ccactctcagcttcaccaatcaccttacgagattacgatgtgaaactacacctcgaacag
acctcggaggaggtcacctccaaatccacaaaaatatttgcaagcaaaggagagtgggag
ctcatccagattgaggcttcggagaagaaattcctggatgactgggcaagctatgattat
gtatcatgggaggtgacgataaagcgaaggccgatgttttacattgtgaacctgctcatt
cccagtgccttcctcatggcgaccgacatcatgagcttctacctgcccactcacagtttt
gaccgagcctcctttaagatgaccctcatgttggggtattccgtattcctcatcatcgta
aaggacctgttgcccagtaactcaacccacactccgctgatagccatcttcttcctggtg
tctctgacctttatggtcaccagtttgtttgagaccatcatcgtcattaacgtcatccac
cagaatggcaagcagaggaaggccgtcccgccttggctcaggaccatcgtcctggtttac
ggggcaaagctgttctggcggaaaggaaaacaacgtgtgtaccaccagatgtcccgcctc
ccacagaatgtcagcatcacagaccaagactgcgaggtgaagaggtcctggccgccggag
atcgagactcttcaggcattgctgcggaagatcgctgagggagtggaggagatcaaacag
tgcgtggagcgtcatgaccaggagcaggagatggaagatgagtggctgcagattggccac
attctcgattgcttccttcactctgtgtacttagtattcttcacggctttcttgttaact
ctctctatcgcttggctgatgtga
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