Scyliorhinus canicula (smaller spotted catshark): 119976808
Help
Entry
119976808 CDS
T11175
Name
(RefSeq) tripartite motif-containing protein 65-like isoform X1
KO
K28076
finTRIM family protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119976808
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119976808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-RING_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
119976808
NCBI-ProteinID:
XP_038673538
LinkDB
All DBs
Position
1:complement(311481391..311563421)
Genome browser
AA seq
520 aa
AA seq
DB search
MGEGGRVNMETFVSISPLAQCGICLETFCCPVTIECGHSFCSECITKYWDGPGGTLSCPQ
CRRTFTSRPLLSKNICLDQITEVLQRVGTNRNPGSDPDPDLRALCKAQHQNLQFYCETER
VAFCSLCNSQDHKTHRTVALNEELTRAQELIANRQQSVESQIKTTSEEISAWKERTASQQ
GCPTLKIPDCLPCPAAQSDVTDRLKKLRPATRELSDLLKKHLEAFTQGHFPVNTPTGQED
AQAQSAESQDSPHNLAPSQSASLSQSMDMSAPSQSVGLSQSMDMSASQSVGLSQSMDMSA
SQSAGLSQSTDMSASLHDDGRLTLSVGRSVRQCHLPPQSRQELMQYLTGITFDPNTASPL
LHVSDNRRRVTNMHPKLQNYPKHKKRFLHHSQVLAHQLFSDGRHYWEISVSGSPVLFGLS
YPHINRSSKFQSSCLGRNNASWCLELAEGSGRFWHCDQPGDPVPSSYQHFGLYLDIPGQT
LAFYGISGSATLLHHLQVTFTHPLLPAFQINRGATIQIEN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagggtggcagggtgaacatggagacctttgtcagtatcagccctctagctcag
tgcggcatttgcctggagacattctgctgcccagtcacaatagagtgtggccacagcttc
tgtagtgagtgtatcacaaagtactgggacggaccgggtggcaccttaagctgccctcaa
tgcaggcgaaccttcaccagcagaccactgctttccaaaaacatctgcctggaccagatt
actgaggtcttgcaacgagtgggaaccaatcgcaatccaggatcagatccagatcccgat
ctcagggcactttgcaaggcacagcaccagaatttgcagttctattgtgaaacagaaaga
gtcgctttctgcagtctgtgcaatagtcaagatcacaaaacccatcgcaccgtggcactg
aacgaagagttaacacgagcacaggagctgatagcgaatcgtcagcaatcagtggagtct
cagattaaaactacatcggaggagatctctgcgtggaaagagagaactgcttctcaacag
ggatgcccgacattgaagatcccagactgtctcccctgtccagccgcccagtcagacgtc
acagaccgcctgaaaaaactcaggccagcaacaagagaattgtcagacctgctgaaaaaa
catctggaggccttcacccagggtcacttcccggtcaatacccccacaggtcaggaggac
gcacaggctcaatcggcagagagccaggattcaccccacaacctggccccatcacagagc
gcgagcctatcacagagcatggacatgtcggccccatcacagagcgtgggcctatcacag
agcatggacatgtcggcctcacagagcgtgggcctatcacagagcatggacatgtcggcc
tcacagagcgcaggcctatcacagagcacggacatgtcggcctccttgcacgatgatggg
agactaactctctctgtcggcagaagtgtgcggcagtgtcatctaccaccacaatctagg
caagaactgatgcaatatttaacggggataacctttgacccgaacacagcctctccccta
ctccatgtgtcggataacaggaggcgtgtgaccaacatgcaccccaagctgcagaattat
cccaaacacaagaagcgattcctgcaccattcccaggtcctggctcaccagctgttttct
gatggccgccattactgggagatttcagtctctgggagcccggttttgttcggtctatca
tatccccacatcaaccgtagcagtaaattccaatcctcctgccttgggcgtaacaatgcc
tcatggtgcctggagctggccgagggcagcgggaggttctggcattgtgaccagccaggt
gatccagtgcccagctcgtaccagcactttggcctctaccttgacatcccaggccagacc
ttggccttctatggcatcagcggcagtgccaccctcctgcaccacttgcaggtcacattc
acccaccctctgctcccggctttccaaatcaacagaggggccaccatccagatcgagaac
tag
DBGET
integrated database retrieval system
