Scyliorhinus canicula (smaller spotted catshark): 119977083
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Entry
119977083 CDS
T11175
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2 isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119977083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119977083
Membrane trafficking [BR:
scau04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119977083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
CCDC39
APG6_N
Motif
Other DBs
NCBI-GeneID:
119977083
NCBI-ProteinID:
XP_038673590
LinkDB
All DBs
Position
14:complement(67075519..67169445)
Genome browser
AA seq
1694 aa
AA seq
DB search
MEESSQDGVPSPATPGTGKSKLDTLPKEDLIKFAKKQVMLLQKTKSKCTALENEIEQLKT
KSTIETNDAVLQELTTRLDSLLLEKAEAQQSAVSLQKEIEKNKEELKDAISRATEFQEEM
KLLKNQHLNKLEALYGEMEAACAKHTEDVTRLENELQASKVKHNAHIGQLEQQLEIYSAQ
QTEAKRLREELDAVKIASEDQILQLKKQLDASAEKQKEEIRSLQENNGDSVEKMESEMKE
LQQELRVTQVSRHEEVTTLKQQFESAVKVHDEELKKLEQDLTKKHTIKEKSLENEAITNR
TNYEHQLNRLEQQLRKMIEEQNEVRKEIPNETASESSEQMKYLENYVKKLELQQSLLQDE
LSYIKETKEKLETELYHTKEEFFHEREDWEFKINELQLTKEEFMNMVTKLTEELQLANDR
CEMAVAQHSCEMQMITEQHEQDISILELNLATAAERKKVELLLEIDNLNKQCEALLEEKV
EIQYQYENLRKTMEILQTELGESASKISYEFEAMKKQQFDEIHDLQQKLRRIFNENDSLL
ETKNRLQAEVEEAEELKQTVSNFQEKNQELTSLIQTKEANLNDLHEQVGTLIREKEELVT
TRKDSEELVNSLKQSLVVEQGKCAEFQQQIQALDKGKYELQQRLDEIACQLEEAISEKES
TFQKLGDMENKLGALITEKEHLDSQTQNLEDFITKLEKEKEALQKDVAMFNLQNENLGEN
EEKLQDLNKQLQILTRERDDLQLADKIAEQKLCDVRLAIINIIEQEVFSFTNDGPELDII
EAVQLLEKSVTKIREEKQSAVMQCNERILHLQQELELQNTAYRDQQAELSCLIDDLRKER
ALLQKHLDEALLDKEGLQRDLLELQNLSEKITQENENLLIQIQNVTEKLENVDTEKQEQD
EKTGKEATEEKEEQLKCQLNEKESELSNLKEELQKLKDLMQETSNEENSLQSTIVELNQK
IVALEKVNNDKENRINKIKAVAVKAKKELDISKKQVLQLTEEIEIVKSERDRLSSSVKDI
MQGAESYKNLLLEYEKQGEKLDIEKERANNCERQVEELTQHLHGCVQQHKQLASDKEDMV
AHLGTLQSNARQLETKILESEKAKVAVEKELEVLKHLKEQASKENHALLKEVEELKKQLQ
NEKHQLHQTAQELELVRKDAQKSTLMDMEIADYERFVKELNQKITDRDNRIVKVVEEMTS
CKQKLETMECEIKSLQATLEEHKEKNTKMKQILVKTKKELADSKRAEGEQSALQASFKGE
LEASQQQVENYKIQVAELTAENHKFQEQLRQVNEQNHRTMSAFTQKMAALQEECSIAKAE
QNATAVDFESYKVRVHNVLKQQKSRSAAQNEHELTQQEKEHLQKVVDQLKAKLQETQCNL
QVNVGELQALQLEHDMLLERHNKILQETVSKEAEIREKLCCVQSENVLLKSEHAQTVSQM
IAQNEAAHQSFRDQVRHLQEDHRKTVETLQKQLTKMEAQILQFQSENNLAKDPLSLEPSS
GKTLRDRRNMDISVLDINSIDRGEGEGMEMTETESVSSTGTQVASLEQLLTSPATLLDVP
QWQPEPTKEEITQKLSTATKSIDHLNGLLRETEATNAILMEQITLLKNEVRRLERNQERE
KSIANLEYLKNVMLKFIFLNAGSEKQSLLPVIDTMLQMSPEEKNKLAAIAQGEDESASRS
SGWVSYFHGWSGLG
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcagtcaggatggtgtgccttcaccagcaacccctggaacaggaaaatct
aagctcgacactctaccaaaggaagacctcataaaattcgcaaagaaacaggttatgctt
ttacagaagacaaagtcaaaatgcactgcactggaaaacgaaattgaacagctcaaaaca
aaatcaactattgaaactaatgatgcagtcctccaggaactgacaactaggcttgattcc
ttgcttttggaaaaagcagaagctcagcaaagtgcagtttctcttcaaaaggagattgaa
aaaaataaagaagaattgaaggatgcaatatcaagagcaacagaattccaggaggagatg
aaattgttaaaaaatcagcatttaaacaaacttgaagctttgtatggggaaatggaagct
gcttgtgcaaaacacactgaggacgtaaccaggttagaaaatgagcttcaagcgtcaaaa
gtgaagcataatgcccacattggccaacttgaacaacaacttgaaatctactcagctcag
caaaccgaagcaaagagactgagggaagaattagatgcagttaaaattgcctctgaggat
cagatattacaattgaaaaaacaattagatgctagtgctgagaagcaaaaggaagaaatc
agaagtctacaagaaaataatggggattctgttgagaaaatggaaagtgaaatgaaggaa
cttcagcaggagttgcgagtaacccaagtctcccgtcatgaagaagtgacaacgttgaag
caacagtttgaatctgccgtcaaagtgcacgatgaggaacttaagaagttggaacaagat
ttaacaaaaaaacatacaataaaagaaaaaagtcttgagaatgaggcaatcactaatagg
accaactatgaacatcagctgaatcgactggagcaacagttaagaaaaatgatagaagag
caaaatgaggtccgaaaagaaatcccaaatgaaacagcttctgaatcaagtgaacaaatg
aagtatcttgagaattatgtgaaaaaattagaattgcagcaaagtttgctacaggatgaa
ctttcctacataaaagaaacaaaagagaaactagagacggaactataccacactaaagag
gagttcttccatgagcgagaagactgggagtttaagataaatgaacttcaactaaccaaa
gaagaatttatgaatatggttacaaaattgacagaagaacttcaattagcgaatgaccgt
tgtgaaatggcagtagctcagcattcctgtgaaatgcagatgatcacagaacaacatgaa
caagatatttcaatactcgagctaaatttagctactgcagctgaaagaaagaaagtagaa
ttgcttcttgaaatagacaatctgaataaacagtgtgaagcattattggaggagaaagtg
gagatacagtaccaatatgaaaacttgcggaaaacaatggaaatattgcagactgaatta
ggggaatctgcttcaaagatcagttatgagtttgaagctatgaaaaagcaacaatttgat
gaaattcatgacctgcagcagaaactgagaagaatttttaatgaaaatgattccctcctg
gaaactaaaaacaggctgcaagctgaagttgaggaagctgaagaactgaagcaaactgta
agtaactttcaagagaagaatcaagagttgacatctttaattcagacgaaggaggcaaac
ttaaatgacttgcatgaacaagtgggcactttaatcagagagaaagaggaactagtcaca
acaaggaaggactctgaagagttagttaatagtttgaaacaatctcttgtggtggaacaa
ggtaaatgtgcagaatttcaacagcaaatccaagcacttgataagggcaaatatgaattg
cagcaaagattagatgaaattgcatgtcaattggaagaggcaatttccgaaaaggagtct
actttccaaaagttaggtgatatggaaaacaaactaggagctcttataactgagaaagaa
catttggactcccaaacacagaatctggaagactttattacaaagttagaaaaagaaaag
gaagctttacaaaaagatgtagctatgttcaatttacaaaatgaaaatttgggcgaaaat
gaagaaaaacttcaagatctcaataaacagctacaaattctgactcgggaaagagatgat
ctccaactggcagataaaattgctgaacagaaactttgtgatgttagacttgcaataatt
aatattattgaacaagaagtctttagttttacaaacgatggtcctgagttggacataatt
gaggcagtgcaattactggagaaatctgtgacaaaaattagggaagaaaagcaatctgca
gtgatgcagtgcaatgagcgcatactacatttgcaacaagaattggaattacaaaatact
gcatatagagatcaacaggctgaactcagttgtttaattgatgacctcagaaaagagagg
gctcttttgcaaaagcatctggatgaagcactattagataaggaaggattgcaaagagat
ttgttagagttacagaacctgagtgaaaaaatcacccaggaaaatgagaatctgctcatt
caaattcagaatgttacagagaaacttgagaacgtggacacagaaaagcaagaacaggat
gagaaaactggaaaagaagcaacagaagaaaaagaggaacagttaaagtgccagttgaat
gaaaaagagtctgagctatcaaatttaaaagaggagcttcaaaaattgaaggatttgatg
caagaaacatccaatgaggaaaatagcttacaaagcactattgtagaactgaatcaaaaa
atagttgctctggaaaaagtaaacaatgacaaagaaaaccgaataaacaagattaaagct
gtcgctgtgaaagctaaaaaagaacttgatataagtaaaaaacaggttctacagttaaca
gaagaaatagagattgtgaaatcagagcgagacaggttgtcttcttccgtaaaagacatt
atgcaaggagcagaaagctacaagaaccttttgctagaatatgagaaacaaggagagaaa
ctggatatagaaaaggagcgagcaaataactgtgaacgtcaggtggaagagcttacacaa
cacctacatggatgtgttcaacagcacaaacagttggcttcagataaggaagatatggtt
gctcatttgggaactttgcaatcaaatgccagacaactggaaacaaaaatattagaatct
gagaaagccaaggtagctgtcgaaaaggagcttgaggtgttaaagcatcttaaggagcag
gcatccaaggaaaatcatgcactgttgaaagaagttgaagaacttaaaaagcaacttcaa
aatgagaaacatcagctgcatcaaacagcgcaagaactggaacttgtcagaaaggatgct
caaaaaagcactttaatggacatggaaattgcagactatgagcgttttgtgaaagaattg
aatcagaaaattactgatcgagacaaccggattgtcaaagtagtagaagaaatgacatca
tgcaaacagaaactagaaaccatggaatgtgaaataaaatctcttcaggcaaccttggag
gagcacaaagagaaaaataccaagatgaaacagatcctagtgaaaacaaaaaaggaactt
gcagattcaaaaagagcagaaggagaacaatcggctctacaagcttcttttaaaggtgaa
ctggaagcaagccagcagcaagtggaaaattacaagattcaagtggcagagttaactgct
gaaaaccacaagtttcaggaacaattgcgtcaagtgaatgagcagaatcatcgtacaatg
agtgcatttacacaaaagatggcagctcttcaggaagagtgcagtatcgctaaggctgag
caaaatgcaactgctgtggattttgaaagttacaaagttcgtgttcataatgtcctaaaa
caacagaagagccgatcagctgctcagaatgaacatgagttgacccagcaggaaaaagaa
catctccaaaaggtggttgaccaactcaaggctaagttgcaggagactcagtgcaactta
caagtcaatgtgggtgagctgcaggctctacagttggagcatgatatgctgctggagcga
cataacaagattctgcaggaaactgtgtccaaggaggctgagattcgagaaaaactttgc
tgtgtgcagtctgaaaatgtactgctgaaatcagagcatgctcaaaccgtgagtcagatg
attgcccagaatgaagcagcgcaccaaagcttccgtgaccaagtccggcacctgcaagaa
gatcacagaaagaccgttgaaacgttgcagaaacaattaaccaaaatggaggcacagatt
ctccagtttcaatctgaaaacaatttggcaaaagatcctctatcacttgagccatcatcc
gggaagactttacgtgaccgaagaaacatggacatatcagtgttagatataaactccatt
gaccgtggagaaggagaaggaatggagatgactgaaacagaatcggtatcttctaccggt
acccaagttgcatctcttgagcaattgctcacttccccggcgactctgttagatgttcct
cagtggcaaccagagccaaccaaggaagagataacacagaaattaagcacagctactaag
agcattgaccatttaaatgggctcctacgtgaaactgaagctaccaatgccattcttatg
gaacaaattacgctgctgaaaaatgaagtgagaaggctagaaaggaaccaggaacgggag
aagtctatcgcaaacctggagtatttgaagaatgttatgttaaaattcatattcctaaat
gcaggtagtgagaaacaaagccttctcccagtaattgacacaatgctacaaatgagccca
gaggagaaaaataagctggctgctatagctcaaggagaagatgaaagcgcttcacgatca
tcaggttgggtttcgtattttcatggctggtctggacttggataa
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