Scyliorhinus canicula (smaller spotted catshark): 119977132
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Entry
119977132 CDS
T11175
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04512
ECM-receptor interaction
scau04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119977132
04518 Integrin signaling
119977132
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
scau04091
]
119977132
Lectins [BR:
scau04091
]
C-Type lectins
Lecticans
119977132
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Stevor
Motif
Other DBs
NCBI-GeneID:
119977132
NCBI-ProteinID:
XP_038673690
LinkDB
All DBs
Position
14:complement(34681472..34957870)
Genome browser
AA seq
3139 aa
AA seq
DB search
MKINLFEKKVNSMESLQRRGASEFCSLCGSVARLLLLLALTVTGSTSGQESLDSVDLYYA
FSSGLSEDSILVANNGIRVPFGRSVDLDPIHDLVIQVQPGDRCTVTVLGNDPLSQRPGQL
TPKKFPCDFGADEVKYSHFGARSPSRDRVKLQLRYDSLEETVILPFVLEVEVVFTQLEIV
TRNVPLSVEKLLGTSNAMDHKVLEFAYNPSWERCRVGALSGAGGLPRYGRLLPEQPGGRM
VDCEEFLRSDTRYRHTAAGRTPDRDHIPMVAELQDTRGNVLKQEYFQVMVRIREGAPNTP
PKPSFVAMMMMEVDQFVLTAITPDMLAAEDAESEADELIFNITTPAAQLAAQGVSVVSTD
DRSLPLTSFYQRELRELRIAFRPPPADSDAERIFQLELEVVDTEGAASDPFAFMVVVKPM
NTLAPVVSRNGGQLLYEGQSRALSSRHNLQLSDEDNLAEVRVSVLDGLRHGQLTVLGSRG
AKFFTPADLDAGLVLYQHDGSDTHSDNVIFRMTDGAHRVEFLFPITIVPTDDEAPVLNAN
TGLALAERGLAPIPPFALSATDVDSEDSTITFRVEPPLSALGQLVLRQREPPADPSGWQR
QPEGGGSFEKAVLEWSQQDITEGRLFYRHVGPHSTDAVMDRFVFRVQDDNDPPNQSGQHT
FVIKIQPVDNIPPELYPGCSLQMVVEEYRLTHFRRKFLRYTDLDSDDRDLKYTVTRPPTD
TDENNPVQMGNIVLTESPATLVMEFTQAQVNHHKIAYRPPDVELGITPHVVQFDFTVEDT
AGNNMEGTCTIFLQPVDNKPPQITNTGFVMFERDTYLITSAELDATDPDTDGPQITFTLS
QPPKHGQLQYAAVGITDGETFNLNDISNGKITYLHNGDESTGDSLKIDVSDGVHTVTISV
KVTVRPVDDEVPTIMLPAGTIGSYLDVLENGATEITTNVIQGTDEDTDDLRLTFIVEDQP
KLGDILVNGIPSERFTQQDIINGAVIYTHTNGEIGLQKREDSFNLTLTDMSDEWNIGGNK
VQGVRVQVTILPVDSQAPDVIVGKQFTVVEGNKNAISLENLKAEDFDTPDDDILCTIIVQ
PTSGYVENISPAPGSETSRAGTAITAFTFKEIRQGHINYVQSIHKTVEPVEDRFTFRCSD
GINFSQRHFFPIVIIPANDEKPDIFMREFVVMEGMSLVIDTPILNAADADIPANDLTFSI
VKPPKHGQIVNQLASGTVLVKSFTLDHIREGSSIVYEHDDSETHEDSFDIRLTDGKYSVE
KTVIIMVIPLDDETPRMTINDGLEIEIGEIKTINNKILKATDLDSEDKTLVYVIRYGPNQ
GLLQYLLPPGNFENITVGMNFTQDDIDKNLIQYTHTGQEGIRDLIKFDVTDGINPLIDRY
FYVSIGGIDMIFPDVVSKGVSLKEGGKVTLTTDLLSTTDLNSPDENLLFSITRAPVRGHL
ECTDQPGVPITTFSQLQLAGNKVYYIHTSDDEVKMDSFEFEVTDGYNPVFRTFRISISDV
DNKKPVLTFHDLVVNEGEVKLITPFELTVEDRDTPDRLLRFTVTQVPVHGQLLFNRTTSV
TSFTKQDLNENLISYKHDGMEFSEDSFSFTVTDGTHTDFYVFPDTVFETRKSQMMKIRTM
PVDNGVPQIIVNKGAPTLRGLTTGHVGFMITSKALKAEDRDSVHSVLRFKILEGPEHGYL
IHMGKGNESIIGFTQGEVDDMKICYVLKEGNNATSDVFHFSVEDRGGNKLKNQLFRLNWA
WISLEKEYYLIDENSKFLEVSLKRRGYLGETSFVGIGTKDGTAEKDKDFRGKSQKQVQFN
PGQTTATWRVRILTDNKYELSETFQIVLSEPVMAVLEFPEIATVEIVDPGDESAVFIPKA
SYAIDEDVGELLIPVKRTGDVSQELMVLCSTHQGTATGTIPSRVLSYSDYITRSEDHNSV
IRFDKDETEKLCHVVIIDDSLYENGETFNVTLSMAMGGRIGVYPSAQITILPDANDEPVF
YFGDTEYQVDESEGYVEVQVWRTGTDLSKTASVTVRSRKTEPASAEAGIDYVGISRNLDF
APGVNMQTFRVTILDDLGQPVIEGPESFELVLRMPMNAVLGEPSKATVLINDSVSDLPKV
QFKDAAYVGKENNGQITAIVYRSGDISYKSTVRCYTRQASAQVMMDFAERPNTDDSVITF
LPGEIEKPCTVTLNDDTIHEEDEDLRLVLGTPKSESPFGASIGEKNETVIKIMDGADKAI
IKFGETKFSISEPKEPGQIAVVKIPVLRLGDTSKVSIVRVHTKDGSAISGEDYHPLSEEI
EFKESETQHFVEVEVLYDGVREMREAFTIHLKPDENMVAETQISKAIVYIEEMNSMADVT
FPSVPQVVSLLIYDDTSRTKENPGPPAGYPVVCVSACNPKSSDYDKTGSICTSEGINDTL
TRYRWLVSAPTGPDGVTSPMREVDSNTFFTSSKMITLDSIYFQAGSRVQCAARAVNSNGD
EGLELTSPIVSISIEEGLCQPRVQGAVGAEPFSAKLRYTGSEDPDHPNLIKVAVTMPHID
GMLPVISTRQLSNFELTLSADGTRVGNHKCSNLLDYNEVKTHYGFLSDSTKNPEVIGETA
PYQYSSSLRGPSTLRFYRNLNLEACLWEFESFYDMSELLTDCGGTIGTDGQVLNLVQSYV
TLRVPLYVSYVFHSPVGVGGWQHFDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYP
TSMRINSEGRLVVNFRTDARFRGLFVMLHPASPLSSMVMSADHPGLTFTLSLVRSEPTYN
HPEQQWSFTSDFAVRDYSGTYTVKLIPCASAPSQEYTIPIVCNPREPITFDLDIRFQQVS
DPVAAEFSLNTQIFLLSRKGLWLSDGSMGFGEGSDVAFTEGSVVYGRVMVDPVQNLGDSF
HCNIEKVFLCTGADGYVPKYNPINSEYGCLADSSSLLYRFKILDKAQPETQDSYFGNVAF
NARLAIDDSEAIALSRQPGSDGFRIDSSPLFQVAAGREWYIHTIYTVRSRDSASRGIGKR
SVEYHIVSHSGNLSSKRHSRQQRSVKEASILAEGIGIENNRGTNIQHIALDRSNRKQVVE
EDIFPEGAVARSPNDRGDKVGNVPIIGGIATLLLAICVVVIIVLLLKRRKQSDKKGEYKK
SPSNKAMTAQNYHSDSSEV
NT seq
9420 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaatcttttcgaaaagaaagttaacagcatggaaagtttgcagcgcagaggg
gcgagtgagttttgcagcttgtgtggatctgtggccaggctgctgctgttgttggctctg
acagtgacaggtagcacatcagggcaggagagtctggacagcgtggatttatactacgcg
ttcagctcgggactgtccgaagactcgatccttgtggccaacaatggcatccgtgtgccc
ttcggccgctcggtggacctcgaccccatccacgacctggtcatccaggtgcagccgggc
gacaggtgcacggtgacggtgctgggcaacgacccgctgtcccagaggccgggccagctg
acgcccaagaagttcccctgcgacttcggcgcggacgaggtgaagtactcgcactttggc
gcccggagtccgtcccgcgaccgggtcaagctgcagctgcgctacgacagcctggaggag
acggtgatcttgcctttcgtgctggaggtcgaggtggtcttcacccagctggagatcgtc
acccgcaacgtgccgctgagcgtggagaagctgctgggcaccagcaacgccatggaccac
aaggtgctggagttcgcctacaacccgagctgggagcgctgccgggtgggcgcgctgagc
ggcgccggcgggctgccccgctacgggcgcctgctgcccgagcagccgggcgggcggatg
gtcgactgcgaggagttcctgcgctccgacacccgctaccggcacacggcggccggccgc
acgcccgaccgcgaccacatccccatggtggccgagctgcaggacacccgcggcaacgtg
ctgaagcaggagtacttccaggtgatggtgcggatccgggagggcgcccccaacacgccg
cccaagcccagcttcgtggccatgatgatgatggaggtggaccagttcgtgctgaccgcc
atcacgcccgacatgctggcggccgaggacgccgagtcggaggcggacgagctgatcttc
aacatcaccacgccggccgcgcagctggccgcccagggggtcagcgtggtcagcaccgac
gaccggagccttcccctcacctccttctaccagcgcgagctgcgggagctgcgcatcgcc
ttccgcccgccgcccgccgactcggacgccgagcgcatcttccagctggagctggaggtg
gtggacaccgagggcgccgcctcggaccccttcgccttcatggtggtggtcaagcccatg
aacacgctggcgccggtggtcagccgcaacggcgggcagctgctgtacgagggtcagtcg
cgggccctgtccagccgccacaacctgcagctgagcgatgaggacaacctggccgaggtg
cgggttagcgtgctggacggcctgcggcacggccagctgacggtgctgggctcgcgcggc
gccaagttctttacgcccgccgacctggacgccggcctggtgctgtaccagcacgacggc
agcgacacgcacagcgacaacgtcatcttccgcatgacggacggtgcgcaccgagtcgag
ttcctcttccccatcaccatcgtgcccaccgacgacgaggcacccgtcctcaatgccaac
acgggcctggcgctggccgagcgtggcctggcgcccatcccgcccttcgccctcagcgcc
accgacgtcgactcagaggactcgaccatcacattccgggtggagccgcccctctcggcg
ctgggccagctggtgctgcggcagcgcgagccgcccgccgacccctccgggtggcagcgg
cagcccgagggcgggggaagcttcgagaaggcagtgctggagtggagccaacaggacatc
accgaaggccgcctcttctaccggcacgtggggccgcacagcaccgacgccgtcatggac
cgcttcgtgttccgcgtgcaggacgacaacgacccccccaaccagtcgggacagcacacc
ttcgtcatcaagatccagccggtggacaacatcccgcccgagctgtacccaggctgctcg
ctgcagatggtggtcgaggagtaccgcctgacccacttccgcaggaagttcctgcgctac
accgacctcgattcggacgaccgcgacctcaagtacaccgtcacccggccccccaccgac
accgacgagaacaacccggtgcagatgggcaacatcgtgctgaccgagagccccgccacc
ctggtgatggagttcacccaggcccaggtcaaccaccacaaaatcgcctaccgacccccg
gacgtggagctgggcatcaccccccatgtcgtccagtttgacttcaccgtggaggacacg
gctggcaacaacatggaggggacgtgcaccatcttcctgcagccggtcgacaacaagccg
ccccaaataaccaacaccggttttgtaatgtttgaaagggacacctatctaattaccagc
gctgaactggacgccaccgatccagacaccgatggaccccagataacattcaccctctct
cagcctccgaagcatggccagttgcaatatgcagcggtgggtatcactgacggcgaaaca
tttaatttaaatgatataagtaatgggaaaattacctacctacacaatggggatgagtcc
actggtgactctctgaaaattgacgtgagtgatggagtccataccgttacgatcagtgtt
aaagtaacagtacgtccagttgatgatgaagtgccaacaatcatgctgccagccggaact
attggatcttacctagatgtgttggaaaatggagccaccgaaataacaaccaatgtcatc
caagggaccgatgaagacacagatgatcttagattgactttcattgttgaggaccaacca
aaactgggcgacattttggttaacggaatcccctctgaaaggtttacacaacaagacatc
atcaacggggctgtgatttatactcacacaaatggtgaaataggactgcaaaaaagggag
gattcttttaatttgactctgactgacatgtctgatgaatggaacattggagggaataaa
gtgcaaggtgttcgtgtgcaggtgactatccttcccgttgacagccaggctccagacgtt
attgtaggaaaacagtttactgtcgttgaaggtaataaaaatgcaatatcactggaaaat
ttgaaagctgaagattttgatacccccgatgatgatattctttgtactattattgtccaa
ccaacttctggctatgtggagaacatttcaccagctcctgggtctgagacatctcgcgca
ggaacggccatcactgctttcacttttaaagagatacgtcaaggacatattaattatgtt
cagagcattcacaaaactgttgaaccagtggaagataggtttactttccgttgctctgat
ggaattaacttctcacagaggcacttttttcctattgtgataatcccggcaaatgatgaa
aagccagacattttcatgagggagtttgtagtaatggaaggtatgagtcttgttattgac
actccaattctcaatgctgcagatgccgacatcccggccaatgacttgactttctctatc
gttaaaccaccaaagcatggtcagatagtaaatcagcttgcatcagggactgtccttgtc
aagagctttactttggatcacatcagagagggctccagcattgtttatgagcatgatgac
tctgaaacccatgaagacagttttgacattcgacttactgatgggaagtacagtgttgaa
aaaacagtaattatcatggtcattccacttgatgatgagactccaagaatgaccataaat
gatggacttgaaattgagattggggagataaaaacaataaataacaaaattcttaaagct
acagacctggactctgaagacaagacacttgtgtatgttatacgttatgggccaaatcaa
gggctcttgcagtatcttctccctccaggcaactttgaaaacattacagtaggaatgaac
ttcacccaggatgatattgacaaaaatttaattcagtatacacatactggccaggaaggc
attcgcgatctcatcaagtttgatgtaacagatggcattaatccactcattgatcgttat
ttttatgtttctattggtggtattgatatgatcttccctgatgtggtcagtaaaggagtc
tctctaaaggaaggtggaaaagtaactctgacaacagatttattgagcaccactgacctg
aatagtccagatgaaaatttgcttttcagtattacccgagcacccgttcgaggtcacctg
gaatgcacagatcagccaggagtacctatcacgacattctcacagcttcagttagctggt
aacaaagtttactacattcacacgtctgatgatgaagtgaaaatggacagtttcgaattt
gaagtcacagatggctacaaccccgtgtttcgcactttcagaatctccattagtgatgtt
gacaacaaaaagccagtcctcactttccatgacttggtggtgaatgaaggagaagtaaag
ctaattaccccatttgaattgactgttgaagacagagacacccctgatcgcttgctgcga
tttactgtgacgcaagttccagttcatggacagctgctattcaaccgcactacgtctgtc
acatcttttacgaagcaggacttgaatgagaacctcatcagttacaagcacgatgggatg
gaattttctgaggatagcttttctttcacagtgactgatggcacacacacagacttctat
gtcttcccagatacagtctttgaaactcgaaaatcacagatgatgaaaatacggacaatg
ccggtggacaacggagtgcctcagattattgtaaataaaggtgcccccactcttcgtggg
ctgaccacaggacacgtggggtttatgattacaagcaaagcattaaaagctgaagatcgt
gacagtgtgcacagtgttttaaggttcaagatcctggaaggtccagaacatggatatctt
atccacatgggcaaaggaaatgagagcattattggattcactcaaggggaagttgatgac
atgaagatctgctatgtgttgaaggaagggaacaatgcaacaagtgacgtattccacttc
tctgttgaagaccgtggtggtaataagttgaagaatcagcttttccgtttgaattgggct
tggatctcgctggaaaaggagtactacctaatagatgagaattctaaattcctggaggtt
tcactgaagcgcagaggatatctgggagaaacctcatttgttggcataggtacaaaggat
ggcacagctgagaaggataaggatttcaggggaaaatcccagaagcaggtgcagttcaat
ccaggtcaaaccacagcgacatggagagtacggattttgacagacaacaaatacgaactg
tctgaaacatttcagattgtactgtctgagcccgtcatggcagttcttgaattcccagag
attgcaactgtggagattgtcgacccgggtgacgaatcagcggtctttatccccaaggct
tcctatgccattgatgaagatgttggtgaactgttgattccggtgaagaggacaggagac
gtgagtcaggaactgatggtcctctgttccacacatcaaggcacagcaactggcactatt
ccatcccgtgtgctgtcctattctgactacatcactcgatcagaggatcacaacagtgtc
atccgttttgacaaggatgaaactgaaaagctgtgccatgttgtcatcattgatgattcg
ttgtatgaaaatggagagacatttaacgtcacactgagcatggccatggggggcagaata
ggagtatatccatctgcacagattaccatccttccagatgcaaatgatgaaccagttttt
tactttggggatactgaataccaggtggatgaaagtgaaggctacgtggaagtccaggtc
tggcgaactgggacagacttgtccaagactgcaagtgtgacagttcgatctcgcaaaacc
gagccagcatcagctgaagcgggcatcgattatgtaggcataagccgcaatctggatttt
gcccctggagtgaacatgcagaccttccgagttactatccttgatgatttgggtcaacca
gtaatagaagggccagagagttttgagcttgtcctgcgcatgccaatgaatgccgtcctt
ggagaaccaagcaaagccacggtgctcattaatgactcagtctcggatttgccaaaggta
cagttcaaagatgcagcctatgtggggaaagagaacaatggtcagatcacagcaattgtt
taccgcagtggtgacatcagctataaatccacagttcggtgctatactcgccaggcatct
gctcaggttatgatggattttgctgaacgtccaaacacagatgattctgtcattacattt
cttccaggtgaaattgagaaaccctgcactgtgactttaaacgacgatacaatacatgag
gaagatgaggatctaagattggtgcttggaactccaaagagcgagtccccatttggtgct
tcaattggtgaaaagaatgaaacagtgataaaaatcatggatggcgcagacaaggctatt
attaaatttggagagaccaaattcagtatcagtgaacctaaagaacccggacagattgca
gttgtaaaaattccagtgcttcgccttggagacacttcaaaagtttctattgtacgagtc
cacacaaaagatggttctgccatctcgggagaagactaccatcccttgtcagaagaaatt
gaatttaaggaaagtgaaactcagcattttgtggaagttgaggtgttgtacgacggagtg
agagaaatgcgagaggccttcaccatccacctgaaacctgatgagaacatggtggcagaa
actcagataagcaaagcaattgtatacattgaggagatgaacagcatggctgatgtcaca
ttcccatcagtcccgcaagttgtctcactgcttatatatgacgatacatccagaacaaaa
gaaaaccctgggcccccagcaggctatcctgttgtctgtgtttcagcttgcaatcctaaa
tcttctgattatgacaagacaggctcaatatgtaccagtgagggcatcaatgataccctt
acccgttatcgctggctggtgagtgccccaactggccctgatggagtgaccagccctatg
agagaagtagattcaaataccttcttcacctcgtccaagatgattactctggactccatc
tatttccaagctggttctcgggtgcagtgcgctgctcgagcagtcaattccaatggggat
gaagggcttgaattaacaagccccattgtatcaatcagcattgaggaaggtctttgccag
cccagagtacaaggagcagtcggtgctgagccattctctgccaagctccgttatacagga
tccgaagatccagaccatcccaacctcattaaagtggctgtaacaatgcctcacatcgat
ggtatgctccctgttatctccacacgccagctgtctaactttgaacttactctcagcgct
gatggtactcgggttggaaaccacaagtgttctaaccttctggactacaatgaagtgaag
actcattatggctttttgtcagattccactaaaaatcctgaggtgattggagagaccgct
ccataccagtatagctcttcgctgcgtggtccttctacacttcgcttctatcgaaatcta
aaccttgaagcttgtctctgggagtttgagagtttctatgatatgtctgagctacttaca
gactgtggtggtactattgggacagatggccaggttttgaaccttgtgcagtcatacgtg
actctgcgagtccctctttatgtctcctacgtttttcattcgccagtgggtgttggtggc
tggcagcacttcgacctgcagtcggagcttcgcttgacttttgtgtacgacactgccatc
ttgtggagggatggaattggcagcccaccagaggcggaattgcagggtgccctttaccca
accagcatgcggatcaacagtgagggtcgcttagttgtgaacttccgtacagatgcacga
ttccgtggcctctttgtaatgttgcaccctgcatcacctcttagctccatggttatgtca
gctgatcacccaggattgacctttaccctcagcttagtgcggagtgagccaacatacaat
catcctgagcaacaatggagtttcacttcagattttgctgtccgtgattattcaggaacg
tacactgtgaagctgattccttgtgcctctgctccgagccaggagtataccatcccaatt
gtgtgcaatccaagggagccaataacctttgatcttgacatcaggtttcaacaggtgagt
gaccctgttgccgccgagttcagcctgaatactcaaattttcctgctaagcagaaagggt
ctctggttgtccgacggctccatgggattcggcgaaggcagtgatgtcgctttcacagaa
ggatcagttgtctatgggcgtgtgatggttgatcctgtgcagaacctgggagattccttc
cactgtaatattgagaaggtgtttctgtgtacaggcgctgatggctatgtgcccaaatac
aacccaataaatagtgaatatggctgcctggctgattcatcttctctcttgtacaggttt
aaaatcctggataaggctcagcctgagacacaagattcatattttggaaatgtggcattc
aatgctagacttgcaatagatgattctgaagcaattgcactttccagacagcctggttct
gatggctttcgaatagactcctccccactgttccaggttgctgccggtcgagagtggtac
attcataccatttacactgtgcggtctcgggacagtgcgagcagaggcattggaaagaga
agtgtggagtatcatattgtttcacatagcggaaacctgagctcgaagaggcattcacgc
cagcaacgatcggttaaagaagcctccatactggctgagggcattggcattgagaacaac
agaggaaccaacattcaacacattgccttggaccgcagcaaccggaagcaagttgtcgag
gaagatatcttccctgaaggagcagttgctaggtcaccaaatgaccgaggtgacaaggtt
ggcaatgttcccattatcggagggattgctaccttactactagctatttgtgttgttgtt
attattgtcctcctgctgaaacgcagaaagcaatcggataagaagggagagtataagaaa
tcacccagtaacaaggccatgactgcacagaattatcacagcgacagctctgaggtttga
DBGET
integrated database retrieval system
