Scyliorhinus canicula (smaller spotted catshark): 119977315
Help
Entry
119977315 CDS
T11175
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03030
DNA replication
scau03410
Base excision repair
scau03420
Nucleotide excision repair
scau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119977315 (rfc3)
03410 Base excision repair
119977315 (rfc3)
03420 Nucleotide excision repair
119977315 (rfc3)
03430 Mismatch repair
119977315 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scau03032
]
119977315 (rfc3)
03036 Chromosome and associated proteins [BR:
scau03036
]
119977315 (rfc3)
03400 DNA repair and recombination proteins [BR:
scau03400
]
119977315 (rfc3)
DNA replication proteins [BR:
scau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119977315 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
119977315 (rfc3)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119977315 (rfc3)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119977315 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
119977315 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
ATPgrasp_ST
AAA_11
ABC_tran
DUF2247
AAA_2
T4SS-DNA_transf
ATPase_2
CHB_HEX
AAA_5
FAP
Motif
Other DBs
NCBI-GeneID:
119977315
NCBI-ProteinID:
XP_038674009
LinkDB
All DBs
Position
14:complement(40386915..40415273)
Genome browser
AA seq
357 aa
AA seq
DB search
MSLWVDKYRPTALAKVDYHKEQASQLRNLVQYGDFPHLLVYGPSGSGKKTRIMCLLRELY
GAGIEKLRIEHQTITTPSKKKLEISTIASNYHLEVNASDAGHSDRVVIQELIKTVAQSQQ
LETSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVITPIRSRCL
AVRVSAPSIEEICHVLSGVCKKEGLLLPQELAKKIAEKSNRNLRKALLMCEACRVQQYPF
SAEQDIPETDWEIYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLLELL
NNCDGLLKGEVAQMAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKQFMEDGLEAMMFS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtgggtggacaagtaccggccgacggccctcgccaaggtcgactaccacaag
gagcaggccagccagctccgcaacctggttcagtatggtgatttccctcacttgctggtg
tatggaccttcaggctcaggaaagaagacgaggataatgtgtttacttcgtgagctttat
ggtgcaggaatagagaagctaaggattgaacatcaaacaataacaacaccatccaaaaag
aaactggaaataagcacaatagcaagcaactatcatcttgaagttaatgcaagtgatgct
gggcacagtgacagagtggttattcaagaactgattaaaacagtagcacagtctcaacag
cttgagacaagtacacagagagacttcaaagttgtgctgctgacagaagttgacagatta
acaaaggatgcccagcatgctctgaggaggactatggaaaagtacatgtctacctgcaga
ttaattctttgctgtaactcaacatcaaaagttattactcctattcgtagtcgatgtctt
gcagtgcgagtctctgcacccagcattgaggaaatttgtcacgtgctaagtggggtttgc
aagaaagaaggtctcttacttcctcaagaactggcgaagaaaattgcagaaaaatcaaat
cgcaaccttagaaaagcattgcttatgtgtgaagcctgcagggttcagcaatatccattt
tcagcagaacaggatattcctgagacagactgggaaatatatctccgagaaactgctaat
gctattgtcagccagcaaacaccacaaaggctgcttgaagtacgtggacggttgtatgag
cttctgacccactgcataccccctgaaataataatgaagggtctcttgttagagttgcta
aacaactgtgatggtctgcttaaaggggaggttgcacagatggcagcctattatgagcat
cgtctgcaacttggcaacaaggccatctatcacctggaagcttttgtggccaagtttatg
gctatttacaagcaattcatggaagatggtctggaagctatgatgttctcatga
DBGET
integrated database retrieval system
