Scyliorhinus canicula (smaller spotted catshark): 119977340
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Entry
119977340 CDS
T11175
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119977340
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Protocadherins
119977340
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119977340
NCBI-ProteinID:
XP_038674063
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All DBs
Position
14:107552928..107559198
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AA seq
955 aa
AA seq
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MTFEKGRGKFAAPVCSHFFDLCSLLLVLLLVPVSDGKTAKYSTYEEELPGTVIGNLAADL
KLTAAGGGPSGFRLMQKSNWTLVLVGESDGQLTVGERIDREQLCQEQEPCLLVFDVVNFS
REKFLLIHVEIQVKDINDNAPEFPQPEMAVEISESSPLGTRLPLEPALDADVGANYLQLY
QVSANSYFKLEVQSRADGVKCAHLVLVQQLDRETEAELSLELSAQDGGRPPRIGRAKLQV
RVLDANDNRPAFEQSSFLVELDEDAPLGSVLLQLEAVDPDQGLNGEVLYGFGPAVPADVR
RLFRLDAQSGRLTLEGPLDHESRPSFELDVEAQDLGAKPSRSGCKVTVRVLDINDNAPEI
SITPAASSSSGLAAYITEAAAKGSFVALVSTSDRDSGRNGRVSCTLYGHQDLELRPAYGN
CHMIVTAAALDREREAEYNLTLVAEDQGPNPHKTIRPYTIRVGDENDNAPSFSRSVYRVS
LLENNQPGAYIATVLARDPDLGHNGRLTYRLLEPASGRLATVDPATGAIYAARSFDRESL
REAELRVEARDGGSPPLSSSATVSLRIADRNDNAPLVTQPLPGNGSAADVIALPGRAPAG
YLATRVRARDADQGLNARLNYRIVSGEEAGLFTIRTDTGEIYLGRPLTSATGPLRLIVAV
SDSGRPPLSATVTLSFTAGAAAEPPGGGGLPGPGKRSWDTSIIIIVVLAGGCVALLMAII
TIATACGKGKEPGGWVKASASAARGNRDNFPASLGVQRFPGGGVSSMCGSEDTEGAGAAA
LEAGGETAGVYLSGESRRAAKPECFPTVSAFGNQTPHPIAIWQSKPLALNKSELAHQTQD
RYSGKDSGKGDSDFNDSDSDISGIGLNKRSVLSQKHNGLWSCTSECKILGHSDRCWSPSS
RGPNTYSSTSSSQHNTILGKSTSLPPDLLRKDTYYQALLPKTAGLQSVYQKIACN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgaaaagggcagaggcaagtttgcagcaccagtctgcagtcactttttcgac
ctctgctccctgctccttgtactgcttcttgttcccgtgagtgacggcaagacggccaag
tattccacctacgaggaagaattgccgggcaccgtgatcggaaacctagccgcagattta
aagctcacggcggctggcggcggcccgagcggtttccgattgatgcaaaagtccaactgg
accctggtcctggttggggaaagtgacgggcagctgacggtcggggagcgcattgatcga
gaacagctctgccaggagcaagagccctgcctgctcgtcttcgacgtggtgaacttctcc
cgggagaagttcctcctcatccacgtggagatccaagtgaaggacatcaacgacaacgcc
cccgagttcccccagcccgagatggcggtggaaatctccgagagctcgccgctggggacc
cggctacccctggagccggcgctcgacgccgacgttggcgccaactatctacaactttac
caagtgtcggcgaacagttacttcaagttggaggtgcagagcagggcggacggggtgaaa
tgtgcccacttggtgctggtgcagcagctggaccgggagacggaagccgagctgagcctg
gagctgagcgcccaggatggagggaggccaccccgtatagggagagccaagctccaggtc
agggtcctggacgcgaacgacaaccggccggccttcgagcagagctccttcctggtggag
ctggacgaagacgcgccgctgggctcggtgctgctgcagctggaggccgtggacccggac
caaggcctcaacggcgaggtgctttacggcttcgggccagcggtgcccgccgacgtgcgg
cgcctcttccgcctggacgcgcagtccggccgcttgaccctggaagggccgctggaccac
gagagccggccgagcttcgagctggacgtggaggctcaggacctgggagcaaagccgagc
cggagcggctgtaaggtcaccgtccgcgtcctcgacatcaacgacaacgcgcccgagatc
agcatcacccccgcggcctccagcagctccggcctggccgcctacatcaccgaggcggcg
gccaagggcagcttcgtggcgctggtcagcacctcggaccgggactcgggccgcaatggc
cgcgtctcctgcactctgtacggacaccaagacttggagctgcggccggcctacggcaac
tgccacatgatcgtgacggcggcggcgctggaccgcgagcgggaagccgaatacaacctg
acgctggtggccgaggatcagggcccgaacccccacaaaaccatccggccctacaccatc
cgggtgggcgacgagaacgacaacgcgccctccttctcccgcagcgtgtaccgggtgtcg
ctgctggagaacaaccagcccggggcctacatcgccaccgtgctggcccgcgacccagac
ctgggccacaacggccgcctcacctaccgcctgctggagccggcctcgggccgactggcc
accgtcgacccggccaccggagccatctacgccgcccgctccttcgaccgcgagtcgctg
cgggaggccgagttgcgggtggaggcgcgcgatggcggctcgccgccgctcagcagctcg
gccaccgtcagcctgagaatcgccgaccgcaacgacaacgcgccgctcgtcacccagccg
ctgcctggcaacggctcggccgccgacgtcattgcgctgcccggccgcgcgcccgccggt
tacctggcaacgcgcgtgcgggcccgggacgcggaccaaggcctgaacgccaggctgaac
taccggatcgtgagcggggaggaggccggactcttcaccattcgcacggacaccggagaa
atctacctgggccgcccgctcacatccgccaccgggcccctgcgactcatcgtggccgtg
agtgacagcggccggccgccactgtccgccactgtcaccctcagcttcacggcgggagcg
gcggccgagcctcccgggggcggcggtttgccgggcccggggaagcggagctgggacacg
tccatcatcatcatcgtggtgctggcgggcggctgcgtcgccttgttgatggccatcatc
accatcgctaccgcctgcggcaaaggcaaggagccgggaggttgggtcaaagcctcggcg
tcggcggccagagggaaccgggacaacttccccgccagcctcggcgtacagcggttcccg
ggcggcggcgtctcctccatgtgcggctcggaagacacggaaggtgctggagccgcggcc
ttggaagctggcggagagacagcgggtgtttacctgtcaggagagagccgcagagcagcg
aagccggagtgttttccaactgtgtcggcctttggtaatcaaactcctcatcccatcgca
atctggcaaagcaagccattggctttaaataaaagcgaacttgcacatcaaactcaggac
agatacagcgggaaggacagtgggaaaggcgacagcgactttaatgatagtgactctgat
atcagtggcatcggtctgaacaaaaggagtgtcctcagtcaaaagcacaatggtttatgg
tcctgcaccagtgagtgcaagatccttggccattcagatcgctgctggagcccatcttct
cgagggccaaatacctattcttccacaagttcttctcagcacaatactattttgggaaaa
agcacttcactccctccagatctactccggaaagatacgtactatcaagcacttttacca
aaaacagcgggtctgcaaagtgtgtatcagaagattgcatgtaactaa
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