Scyliorhinus canicula (smaller spotted catshark): 119977373
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Entry
119977373 CDS
T11175
Name
(RefSeq) nectin-3-like isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04514
Cell adhesion molecules
scau04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119977373
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119977373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119977373
04090 CD molecules [BR:
scau04090
]
119977373
Cell adhesion molecules [BR:
scau04515
]
Immunoglobulin superfamily
Nectin family
119977373
CD molecules [BR:
scau04090
]
Proteins
119977373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
C2-set_2
ig
I-set
Ig_2
Ig_6
TM_ErbB1
Keratin_assoc
Motif
Other DBs
NCBI-GeneID:
119977373
NCBI-ProteinID:
XP_038674127
LinkDB
All DBs
Position
14:118837283..119091617
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AA seq
522 aa
AA seq
DB search
MAGTEAPAPLLLWMLLLLPGTLAGPVVVDKKVSAILDKNVTLKCLVTVKETVTQISWEKQ
EHGTSDTIAVFHPLYGTSIQGNYEGRAVFTNPSLKDATILITRVGFSDSGIYICKVVTFP
LGNYQETSIVTVIVEPTITVGGGPEPLVDGANETVAAICTAANGKPAAVVFWETDLIGEQ
EQTKISAPNQTVTVVNQFKIVPSRFVRKRPITCIVRHPPLNTTTRVPYILDVQYAPEVTV
MGYDGNWFVGRQNVQLKCKADANPSPSAYIWSRLEAQLPEDLQIENDTLTFNRPLNHNDS
GIYICNVVNIHGRRKKQKIVQIRDPPTTTLLSTTAPPIYSTAGITSLSTFTQRLPIAPKN
MESVKSDSLGTIIGGVVGGTLFLMLMVIIIIMFYLRHRRTFRGDYYTKQFTGAADIQKDS
QMDVLQSNRIEPYTDYEKSEQKFEPNNIFQDYPIEVQKSKWQSEDNINNRYTEGVEIPVD
CYEDRKIPNAPQYLHDDYYDENEDDLVSHLDGSIISRREWYV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaccgaggctccggcaccgttactgctctggatgctgctcctgttgccgggt
accttggctggaccagttgttgttgataagaaggtatctgcaattttggacaaaaacgtc
accttaaagtgtttggttaccgtgaaagaaactgtaactcagatctcctgggagaagcaa
gaacatgggacctcagacactattgcagtgtttcatcctctttatggaacctcaatccaa
gggaactatgaaggaagagctgtgttcacaaacccatctttgaaagacgcaacaattctg
attactagagttgggttttcagattctggaatctacatctgcaaggtggtcactttccca
ttgggaaattatcaagaaacaagcattgtgactgtaatcgttgaaccaacaattactgtg
ggaggtggccctgaaccacttgttgatggtgctaacgagacagttgccgcaatatgcaca
gcagccaatggaaaacctgcagcagttgttttctgggaaactgatctcattggagaacag
gagcagacaaagatttctgccccaaatcaaactgtgactgttgtaaatcagttcaagatt
gttccatcccgatttgtgaggaagagaccgatcacgtgcatagtgagacatccaccactg
aataccactactcgagtcccatatattttagatgtacaatatgcccctgaagttactgtg
atgggatatgatggaaactggtttgttggcagacaaaatgtacaacttaaatgtaaagct
gatgcaaacccatcaccttctgcatacatatggagcagattggaggcacagttaccggag
gatttgcagattgaaaatgatactctaactttcaaccgaccactcaaccacaacgattct
ggcatctatatctgcaatgtagtgaacattcacggacgcaggaaaaaacaaaagattgtt
cagataagagatccacccactactaccctgctgtcaacaacagcacctccaatttattca
acagcaggtatcacaagtttatctacttttacccagaggctcccaattgctccaaaaaac
atggaatctgtgaagagtgacagcttgggaaccatcattggaggtgtggttggtggcact
ctcttcctcatgcttatggtaatcatcattataatgttttacttgagacaccggcgtact
ttccgcggggactactatacaaagcagtttactggagcggcagacatacagaaggactct
caaatggatgttttacaatcaaatcgaattgagccatacactgattatgagaaaagtgaa
cagaagttcgaaccaaataacatatttcaggattatcccatcgaggtgcagaaaagtaaa
tggcaaagtgaagacaatataaataacagatacactgaaggtgttgagatacccgtcgac
tgttatgaagatcgaaaaattcccaatgcacctcagtatctgcatgatgactattatgat
gaaaatgaagatgatctcgtttcacacttagatggttcaatcatttctcgccgggagtgg
tatgtctag
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