Scyliorhinus canicula (smaller spotted catshark): 119977462
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Entry
119977462 CDS
T11175
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119977462 (tbc1d4)
Membrane trafficking [BR:
scau04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119977462 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119977462 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
119977462 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119977462
NCBI-ProteinID:
XP_038674331
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Position
14:144917361..145218151
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AA seq
1292 aa
AA seq
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MEEDGGNNPAPQEEKGKGEKRFTLWYMGCSTLDRRTTLPMLPWLMAEIRRRCEKQEAGSS
MAAREVLFTLVPPLIRCVPQATSSNASVFIFEHKAQHVTRFIHNSHDLTYFAYLIRTQPD
NPESEMACHVFRATDPNQVPDVISSIRQVSKATLKGDTKSRQVSEDAFYNSQKYEVLYCG
KVMVTHKKAPSTLIDDCIEKFTQHQLEKERLRLLNEKAPADDTAGQEVEDGEGDSAPRRE
VADEATVSTNLPSASGSQSDLPGLSLRSALTEPALGDTPLEEEHAEFRSRCNSVASIRPR
QVPDLGTKLPARRRHASAPSHVQPSDTDKNRTMLFQVGRFEVNLISPDTKTVVLEKNFKN
ISSCSQGIKHVDHFGFICRESVEQGLNHYVCYVFQCANESLVDEVMLTLKQAFSTAAALQ
NAKTQIKLCEACPMHYLHKLCERIEGLYPPRAKLAIQRHVSLLSDNEQADIFERVQKMKP
ADDQDENELVILILRQICETKQKTHAHLGETPMPVPNNMIPEHSASTGRFKLDVLKNKAR
KSLTNSLENIFSRGAKMRDRLGSMDSFERCNSLASDASRVSPGDGSSGESPPSSPPVSPR
ASPVSSLGQLYAEEDPDSPQFRRRAHTFSHPPSSSKRRISFPTEKLHHGRSPIVRQQSEI
LRSSPINIVRCNRSSSEIEPTSSSLPSSLSVPTFLKPFYTNTSRLLERPESETPKSDGEG
RRRAFSGWSTESLSGSGVVLTPRRISWRQRIFLRVASPMNKSSSAMQQKGTLEDHLDAIE
LPPLSPLTPAVEEDPLASLMMADDIPVGEKKKHSSEELRIMWRKAICQQILLLRMEKENQ
RLEASRDELQTRKVKLDYEEFVLCQKEVSAVWDKMLTTPGRAKLKVDMEKVHAALSQGVP
KARRGEIWQFLAEQYRLRHRLPEKQQPADISYKELLKQLTTQQHAILVDLGRTFPTHAYF
SAQLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHTSEEQAFEMLKFLMYDLGI
RKQYRPDMISLQIQMYQLSRLLHDYHRDLYNHLEDNEVSPSLYAAPWFLTFFASQFPLGF
VARVFDIMFLQGTDVIFKVALSLLSSHEPLILQCDSFETIVDFIKSTIPNLNNTQMEKTI
AQVFEMDISKQLHAYEVEYHVLQDEMVEGSSPCDDGDRLEKLERANCQLKRQNMELLEKL
QATRFKIQNLEVSIESILSRENKMKVLIRTMEQEKQTHLKTIDHMRKYLPPDALSDGELL
PRKNSGLFSSRKPEATDGELDSSKVKIGNNKP
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacggcggcaacaacccagccccgcaggaggagaagggcaaaggggagaag
agattcaccctgtggtacatgggctgctccaccctcgaccgcaggaccaccctgcccatg
ttaccctggctcatggccgagatccgcaggcggtgcgagaagcaagaggccggttcgtcc
atggcggcccgggaggtgctgttcaccctcgtgccccccctcatcaggtgcgtccctcag
gccaccagcagcaacgcctcagtcttcatctttgagcacaaggcgcagcatgtgaccagg
ttcattcacaacagccatgaccttacctacttcgcctacctgatcaggacccagcctgac
aaccccgagtccgagatggcttgccacgttttcagagccaccgacccaaaccaggttcct
gatgttatcagcagtattcggcaggtgtccaaggctaccttaaagggtgatacaaaatcc
cggcaagtcagtgaggatgccttttacaactctcagaaatacgaggtgctgtattgtggt
aaagtgatggtgacgcacaagaaggctccgtccacccttattgacgactgcatagagaag
ttcacccagcaccagctggaaaaggagaggctgcggctgctgaacgagaaggccccggct
gacgacactgctggccaggaggttgaagatggcgagggtgattcggcgccccgccgtgag
gtggccgacgaggccacagtgagcaccaacctgccttcggccagcggcagtcagagcgac
ctgccgggcttgagcttgcgttcagctctgaccgagcccgctctgggggacacgccgctt
gaagaggagcatgccgagttccgctcccggtgcaacagcgtcgccagtattcggcccagg
caggtgcctgacctgggcaccaaattgccagcccggaggcgtcatgccagcgctccaagt
cacgtccaaccctccgacacagacaaaaataggacaatgttattccaggttggtcggttt
gaagttaacctcatcagccctgataccaaaacagtcgtacttgaaaagaatttcaaaaat
atttcctcctgctctcagggtattaaacacgtggaccattttgggttcatttgtcgagaa
agtgttgagcaaggtctaaatcactatgtgtgctacgtgtttcagtgtgccaatgaatcg
ctggtggatgaagtcatgctgaccttgaagcaagcctttagcaccgctgccgccctacag
aacgctaagactcagatcaaactgtgtgaggcgtgtcccatgcattacctgcacaaactc
tgtgaaaggatcgaaggtctctacccaccaagagccaagcttgccatccagagacatgtt
tctcttttgagtgacaatgagcaagctgatatttttgaacgtgttcagaaaatgaagcca
gctgatgaccaagatgagaatgagttggtgattctcattctgcgccagatttgtgagacc
aaacagaagacgcacgcccaccttggcgagaccccgatgcctgtgccaaacaacatgatc
ccagagcactcagcaagcacagggaggttcaaactcgatgtcctgaaaaacaaggccagg
aagtctttgaccaactctctggaaaatatcttctcacggggcgccaagatgcgggatcga
ttaggaagcatggacagctttgaacgttgcaacagcctggcatcggatgcatccagggtg
agtcctggggacggttcctcgggggagtcgcctcccagttccccgcccgtcagcccccgg
gcatcccccgtctcctcgctgggtcagctctacgcggaggaagacccagactcgccacag
ttccggaggcgggcacacactttcagccacccaccgtcaagcagcaagcggaggatcagc
ttccccacggagaagctgcaccacggcaggtctcccatcgttcgccagcagtcggaaatt
cttcggagcagccccatcaatatcgtgagatgcaatcgcagtagctccgagatcgaaccc
acttccagcagccttccctcgtccctgtccgtcccgactttcctgaagcccttttacacc
aataccagcaggctgctggagcgaccagagagtgagacccccaagagtgatggtgaaggc
agaagaagggccttttctggctggagcacagagtcactgagcgggagtggggttgtcctc
actcctcggcggatctcgtggcgtcagcggatcttcctacgggtcgcctcacccatgaac
aagtcgtcttcagccatgcagcagaaaggaacattggaagatcaccttgacgccattgag
ctgccacctctttccccgctcaccccagctgtggaggaggaccccttggcctctctgatg
atggcggatgacatcccagttggggagaagaagaaacactcttcggaggagttgcggatc
atgtggagaaaagccatttgccagcagatccttttgcttcggatggagaaggaaaatcaa
agactggaagcaagcagagacgagcttcagaccaggaaagtgaaattggactatgaagaa
tttgtgctttgccaaaaggaggtttctgcagtttgggataaaatgctgaccactccagga
agggcaaagttgaaagttgacatggagaaggttcacgctgctctcagtcaaggtgtaccg
aaagctcggagaggagagatctggcaattcttagccgagcagtaccgcctgagacaccgg
ttaccagagaaacagcaaccggccgatatttcgtacaaagagcttttgaaacagctgacg
acccagcagcacgctatcctggtggaccttggacgaacgtttcccacccatgcatatttc
tcggcacagttgggagctggccagctctcgctgtttaatctccttaaagcctactcgttg
ctggacaaggaagtgggctactgccagggcattagctttgttgcgggggtcctccttcta
cacacaagtgaagagcaggctttcgagatgctcaagttcctgatgtacgacctaggcatc
cggaagcagtacagacctgacatgatatcgttgcagattcagatgtaccagctgtcaaga
cttctgcacgattatcaccgggatttgtacaaccaccttgaagacaatgaagtcagcccc
agtctatatgcagcaccgtggttcctcactttcttcgcctcccagttcccattgggattt
gtagccagggtgtttgatattatgtttctccaagggactgatgtgatatttaaagtggcc
ctcagcctgctgagcagtcatgagccattaattctgcagtgtgacagcttcgagaccatt
gtagatttcatcaagtccaccattccaaacctgaataacacacaaatggagaaaactatc
gctcaggtatttgagatggacatttccaaacagctccatgcctatgaggtggagtaccat
gtgttgcaagatgagatggtggagggttcatcaccctgtgacgatggggaccgtctggaa
aaactggaaagagctaattgtcagctgaagagacagaacatggagcttctggagaaactt
caggccactcgcttcaagatacagaatctggaagtcagcattgaaagcattttaagccga
gaaaataaaatgaaggtcttgatccgtacaatggagcaggaaaaacagacacacttaaag
actatagatcacatgcgcaagtatttgccccccgacgccctgtcagatggggagcttctg
ccaaggaagaactcggggcttttctcatccaggaagcccgaagcaacggacggggaactg
gacagcagcaaagtgaaaataggaaacaataagccatga
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