Scyliorhinus canicula (smaller spotted catshark): 119977477
Help
Entry
119977477 CDS
T11175
Symbol
arvcfb
Name
(RefSeq) LOW QUALITY PROTEIN: ARVCF delta catenin family member b
KO
K28154
splicing regulator ARVCF
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119977477 (arvcfb)
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119977477 (arvcfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
HEAT
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
119977477
NCBI-ProteinID:
XP_038674386
LinkDB
All DBs
Position
1:10988853..11463037
Genome browser
AA seq
787 aa
AA seq
DB search
MDDYDVRSAASILASVKEQEARFEKLTRALEEERRNVSMQLERATIPSERSSISNIDNNE
SFAWQQLVLQEQSPCSQTSKTMQEPQELVEETVTVEEDPGTPTSHVSVVTSDDGTIRRTE
TKLLIRGYDDPIEAEIIEDRIPYLTDVYNAPLAQPERGSMASLDRLGRRSPSIDSIRKDP
RWRDPDLPEVIAMLGHHLDPVKSNAAAYLQHLCYENDKIKKEVRQLKGIPVLVGLLDHPK
PDVHRRACGALRNISYGKDHDSKVAIKNCDGIPALVRLLRKTNDMEVRELITGTLWNLSS
YEPLKIVIINHGLQTLTNEVIIPHSGWENEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDG
SDARRRLRECEGLVDALLHALQSAVGKKDMDRKSVENCVCIMRNLSYQVHREVPGADKFR
EPAADQTGTGNSQKKKKDDSGCFGGKKAKEEWFNQGKRNVDADKNFDTLDLPKRIEPVKG
YELLYQPDVVRLYLSLLTESRNYNTLEAAAGALQNLSAGQWTWSSYIRSTVRKEKGLPIL
VELLRSDSDKVVRAVAIALRNLSVDGRNKDLIGNYAMHDLISNLTGGQQRPAKNLEEDTI
VAILNTIHEIVTDSSSNARSLIQAQGIEKLVAINKSSQSVREMKAAAHVLQTVWSYKELR
NALHKDGWNKSHFQPNVTTLPKGSKSSGKATGYDDSTLPLIERNQKDGNKWPGEMIPMEQ
FGPDTYSTLDQREKERKCKTSDVSGDAFERQPLRNDTNKRNINRISRASVNLVDAHDTKP
QPVDSWV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatgatgtaagatctgcagctagcattctagcttcggttaaagaacaggag
gctcggtttgagaagttgaccagagcacttgaggaagagcgtcgtaatgtttccatgcaa
cttgagcgtgccactattccctcagaaagatcaagtatatccaacattgacaacaatgag
tcgtttgcgtggcaacagctagtgttacaggagcaaagcccctgcagccagacttcaaaa
acaatgcaggagccacaagagctagtggaagaaactgttactgttgaagaggacccaggc
actcccacctcccacgtatctgtggtgacatcggatgatggaactataagaagaactgaa
actaagttgctcataagaggttatgatgatcctattgaagcagagatcattgaagatcgg
attccgtatctaacagacgtctacaatgcaccactagctcagccagaaagggggagcatg
gccagcctagaccggcttggaagacgctcaccatctatagacagtatccggaaagatcct
aggtggcgggatccagatctcccagaggttatcgcaatgctcggccatcaccttgaccca
gttaaatcaaatgccgctgcctacctgcagcatctgtgctatgagaatgacaaaataaaa
aaggaagtaaggcagctgaagggtatacccgttttggttggacttttggaccatccgaaa
ccagatgttcatcgtagggcctgtggtgctctgagaaatatctcgtatggtaaagatcac
gatagcaaagtggcaatcaagaattgtgatggaattcctgctctggttcgattattaagg
aagaccaatgacatggaggttagagaactaataacaggtacactgtggaacctgtcgtcc
tatgagccactgaaaattgtgattatcaatcacggccttcagactctaacaaatgaagtc
atcattcctcattcaggctgggagaatgaacctaatgaggattccaaaccacgtgatgct
gaatggacaacagtcttcaaaaacacatcaggatgtctaagaaatgtgagttcagatgga
agcgatgcccgaagaaggcttcgagaatgcgaaggtttggtagatgcactcttgcatgca
ctgcagtcagcagtaggcaagaaagacatggaccgaaagtcagttgagaattgtgtgtgt
attatgaggaacctctcctatcaagtgcacagagaagtgccaggggctgataaattcaga
gaaccagcagctgaccaaactggaacaggaaattctcaaaagaagaagaaagatgattcg
ggttgctttggtgggaagaaggcaaaagaggagtggtttaatcaaggtaaaaggaatgta
gatgctgacaagaactttgataccctggacttgccaaagcgtattgaaccggtgaaaggt
tatgagctgctgtaccaacctgacgtcgttcgactctacttatccttgctcacagaaagt
cgaaattacaacacattggaggctgcagcaggtgctctgcagaacctaagtgctggacag
tggacgtggtccagttacattcgttcaactgtgcggaaagagaaaggcctcccaatattg
gtggagctgctgagatcagattctgataaggttgtacgagctgtggcaatcgcattgcga
aatctttctgtagacgggcgcaataaggacctcataggtaattacgctatgcacgatctg
ataagcaatctgactggtggtcaacaaaggcctgccaagaaccttgaagaagacacaata
gtggcaatactcaacactatccatgaaattgttactgacagttcatcgaatgccagatcc
ttgattcaagcacagggcattgagaagcttgtggcaatcaacaaatccagccagtcagta
agggagatgaaggctgcagctcatgtcttgcagacagtatggagttacaaggagttgaga
aatgctttgcataaagatggctggaacaagtctcacttccagccgaatgtgactacactt
cccaaaggatctaaaagtagtggcaaagcaactggctatgatgacagcactctgccatta
attgaaaggaaccaaaaagatggtaacaaatggcctggtgaaatgatacccatggagcag
tttggtccagatacttattccaccttggatcagagagagaaagagcgcaagtgtaagacc
tcggatgtttctggagatgcttttgagcgacaacctttgcggaatgatacaaataagaga
aacattaacaggattagtagggcctcagtgaaccttgtggatgctcatgacactaaacct
cagcctgttgactcctgggtctaa
DBGET
integrated database retrieval system
