Scyliorhinus canicula (smaller spotted catshark): 119977537
Help
Entry
119977537 CDS
T11175
Name
(RefSeq) high-affinity choline transporter 1 isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119977537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119977537
Transporters [BR:
scau02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
119977537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
119977537
NCBI-ProteinID:
XP_038674512
LinkDB
All DBs
Position
14:complement(67603497..67615687)
Genome browser
AA seq
634 aa
AA seq
DB search
MSFEHIHHQSQHSDGRRCDLLLRCRTFEDRCYIKQTLTALNSRPFCNVRCLFSHFRTSVI
HASLHQFIMRDATFLFSLSCCFHLCWRRNYICSSPGLRLSFSKTAPSFLMTATWVGGGYI
NGTAEAVYVPGYGLAWAQAPFGYALSLVLGGLFFAKPMRSRGYVTMLDPFQQIYGKRMGG
LLFIPALMGEMFWSAAVLSALGATLSVIVDININLSVVISALIAILYTLVGGLYSVAYTD
VVQLFCIFIGLWISIPFAMLNPAVTDISITASQEIYQEPWLGSVNTLDIFTWIDNFLLLM
LGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCVVMAIPSVLIGAIGASTDWNQTSYGLP
DPKNKNETDMILPIVLQHLCPSYISFFGLGAVSAAVMSSADSSILSASSMFAHNIYHLAF
RQEATDKEIVWVMRITIFLFGGAATSMALLAESIYGLWYLSSDLVYVIIFPQLISVLFIK
GTNTYGSIAGYVIGLLLRISGGEPYLHLQPFICYPGCYLEHSFGGKPVYIQRFPFKTMSM
LFSFLGNLGVSYLAKHLFESGILPPKLDFLDSVVSRHSKENMDKTTLVNHDNITLSELAH
VNPKHSASHNAAFSNKEAFDDSETNTEFSKSDND
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgagcacatccatcaccagtcacaacattctgatggaagaaggtgcgatttg
cttctccgttgtcgaacatttgaagatagatgttacataaaacagactctcactgccctg
aactctcgacccttctgtaatgttcgttgtctttttagccatttccgcacaagtgtaatt
catgcctcacttcatcagttcatcatgagggatgctacatttttattctcattatcttgc
tgtttccatctctgttggcgccggaattatatttgctccagtcctggactaaggttgtct
ttcagtaaaactgctccttcttttctcatgacagcgacctgggttggcggtggttatatc
aatggcacagcagaggcggtttatgtccctgggtacggcctggcctgggcacaggctcca
tttggatatgcactcagtctggttttaggtggtctatttttcgctaaacccatgcgctca
cggggttacgtgaccatgttggatccatttcagcagatctacggcaaacgaatgggagga
ttgcttttcatccctgctctcatgggagagatgttctggtcggcagctgtactttctgcg
ctaggtgcaaccttgagcgtgattgtagacatcaacataaacttatcggttgttatttct
gctctgatcgcaatattatacactctggtgggtggtctgtactcggtcgcgtacacggat
gtggtccagttattctgcatcttcataggattgtggatcagcatccctttcgccatgtta
aacccagcagttacagatatctccatcacagcaagtcaggagatttaccaggagccttgg
ctggggtctgttaacacactagatatcttcacttggatcgacaacttcctattattgatg
ttgggtggaatcccatggcaagtgtattttcaaagggtcctttctgcttcttccgcgacc
tatgcacaggtcctctcctttctggctgcttttggctgcgtagtcatggccattccatct
gtacttatcggtgcaattggtgcatccactgactggaatcagacttcctatggtctgccg
gatcccaaaaacaagaatgagacggacatgattttgccaatagtgctgcagcatttgtgt
ccatcttatatttccttttttggccttggagctgtctctgctgcagtgatgtcatcggct
gattcttccatcttgtcagcaagttccatgtttgctcacaatatttaccatcttgcattc
agacaagaggccacagacaaagaaatagtgtgggttatgcgaatcaccatttttctgttc
ggaggagcagcaacatctatggcactgctggccgaatctatttatggtctatggtatttg
agctcagaccttgtctacgttattatctttcctcagttaatatcagtactcttcatcaaa
ggaacgaacacatatggctcgattgctggatatgtcattggtcttttgcttcgaattagt
ggtggtgaaccatatttacacctgcaaccatttatttgttatcctggatgctatttagaa
catagttttggaggcaaacctgtctacattcagagattcccctttaaaaccatgtcaatg
ttattctccttcttgggaaaccttggtgtctcatatctggccaagcatctgtttgaaagt
ggaatattgccaccaaaattagactttcttgacagtgttgtgtcacgacacagtaaggaa
aacatggacaaaacaaccttggtgaatcatgacaatattactttgtcagagctggcgcat
gttaatccaaaacacagtgcttcacataatgctgctttcagcaataaggaagcatttgac
gactctgagacaaatactgaattttccaagtcagacaatgattga
DBGET
integrated database retrieval system
