Scyliorhinus canicula (smaller spotted catshark): 119977762
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Entry
119977762 CDS
T11175
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119977762
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Cadherin related
119977762
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119977762
NCBI-ProteinID:
XP_038674894
LinkDB
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Position
14:complement(188066..476974)
Genome browser
AA seq
2226 aa
AA seq
DB search
MDLLKNPQPKCQNIFLWLQLLSGVLIGWSVAGSEEPLMLQIDEEQPAYTIIGDINAGLPP
GHITSSFFIHETDGTSMSSDLIIDETTGIIKTAKVLDHESRDMYKFVAVNWGGDAVEVVI
IVNDINDNSPVFPNSQMKLHVPEQTPVGTRFRLDSAIDADGGQFNTQGYLIKDGNFGQAF
RLETKRVAETLDLELVVNYPLDREKRSTYTLVIEAFDGGSPHRTSQMTLDVSILDVNDNA
PIFNQTRYYTMISESLQPGTSLLQVFATDVDEGNNGVVIYEINRRQSDPNQYFAIDSKTG
VIKLNKGLDYEMKKVHELVVQAKDNATEPEVTTAFVTVQVKDYNDNQPTLTIIFLSEDGS
PHISEGAQPGQFVARISVSDPDYGEYAKVNVSLDGGDGKFGLTTKDNIIYLICVDQVLDR
EEQDAYQLSVMATDSGTPPLRAESTFTIHVTDVNDNPPVFDHMGYRQSIPEVLYPGSFVL
QVTATDKDEGSNGEILYSIVSNPKSHSDWFTIDQVTGVITTAATLDYETDPATRLTVMAT
DRGNTPMSSSVTVTIVIQDVNDNEPVFSSNFYNTSIKENEPMGTCFLQVSATDADSGSFG
TITYSIGFGIGSSAPTQFTINQLTGRVCTTRQLDRDEGPKHYEFTVTAVDGGGLKSMAYV
KVYLDDINDNRPVFYPVQYAASISTQSLPGTAVLRVSAFDKDGGRNGKVTYRIFSGNQLS
LFTLNKDTGVLSLVAHLHGRADMVQRLVISAQDPDGLMSLVNAMVNISIVSGTISPPLFQ
QAQYFFTIPEDVRRGSHIGSVRALNSPGRSDSVSYTISSGDPNGYFAIGVGSGMIRTSIP
LDHESHPVVILDVQACSGSPPAYSSTKVKITISDINDNTPTFPTSSESILVPENTEIGSL
IYTVNAQDQDSGANGQVQFDIVSNTERTFSIDRSSGKLRVIGPLSYEMVSHYELEIVAKD
NGAPQLSSTFTLMVHVQDASDNAPIFDTLTYRVEVKEGTPVNTQFLQVRALIQDRSTHIT
YHLRSDGDAANFGIVSKSGWLYVKSALDRENKDLFSLTVVASSDEGDQKKTGTTMVRVCV
TDENDNAPKLTENRYFFTVQENIPPSSTIGRILATDRDHGINSKLSYRLFPAHSSFHINS
LTGDISVKSSSGLDYEETPRLRLVIKAESPSSFVFTSVTLNLHDVNDNLPHFQLQNYVAF
IWEAQGYNTPIMQVLANDLDQGQNGQVTYSIAASSQSDLFRINPLTGDISTAAIMDREIW
PKTQLRLTATDRGTPRLVGTATLTVIILDLNDNSPTIPLPRVVRVPESESPSLKVTIAES
VTLSSSIITVTATDRDSGQNGQIVYSLVSPSTAGFSINPHNGTLFTVRDVEFKVSEPLDL
VIEARDGGSPPLSSLTTVQIQVQDINDHTPTFTHRMYMANILEDLRPGSTIFTLEAMDSD
ISQDNSGLDYTIVSGNTANVFQVESSVKVENGQFRTVGSILLLDALDFETVAEYNLTIAV
SDRGIPQQSAVVYAIVTIQDVNDNPPVFNRTQYKVTVSESVAVGTEIVRVAAHDPDSGQN
SVLRYTITSGDENGQFAVSEMTGIVRLMKALDREAQDQHIFIIQVTDSQGPHPNFALVPL
TVEVKDVNDNHPFFPMERLSANIRENLPADSLVARVHAIDFDCGIFGKLQYSIISQPISQ
PGIGKDKEIFYINQSTGELHTKLSFDFEKLNSVQVVVKAVDSGNSSATVTVQVLVTGEDE
YDPVFVNPTYTFVVPENAKKGQKIGQVMATDEDGGLDGIILYSLLTPSQYFKVNKSSGDL
ILKMDSERGQSEQSKRETRTMTLNIQAKGPLPTSRSTITQTSIDITQTSFGLAPEMNLLL
IIALAVSLGIGGILAIIGLALVIVRAKRKKNHDEDSSQLNKIQDNTLQKVAPDAATLPAS
DRIYHQTLPGYSAEPTVVGGPYTRGDSIDPSHSSGRGSAEAAEDDEIRMINEYPRVSSIT
SSMQEHVSTRGPDSGIQQDTDQMSDISTDPGMEWFKHKKGSSLLVAGPQHLYRDDGGGYI
GTGVGLGVSQTKDYAFAEDGRPSAQGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLASV
FTEIARLKDESAPRKHFQSKPKVDPKPRIDPPPLITSVAHPNAMSVPPRLAVGRTHSHVT
AMPRSPITSDASITSAAMSPSFSPSLSPLAARSPAVSPFDVSQGPSTSIISTEHSLDNPE
EPELRI
NT seq
6681 nt
NT seq
+upstream
nt +downstream
nt
atggatttactgaagaatccgcagcctaaatgccaaaatatcttcctgtggcttcagctg
ttgtcaggagttttgattggatggtctgtcgctggctcagaggaacctcttatgttacaa
attgatgaggagcagccggcttacaccatcattggagatatcaatgcaggtctcccacct
ggacatataaccagcagcttttttattcatgagactgatggcaccagcatgtcctctgat
ttaattattgatgaaaccactgggattatcaaaacagccaaagtgttggatcatgaatcc
agggatatgtacaagtttgttgcagtgaattggggaggtgatgcagtggaggtggtgatc
atagtcaatgatatcaatgataattctccagtatttcccaacagtcaaatgaaacttcat
gttcctgaacagacaccggtggggacaaggttccgtttagattcagccattgatgcagat
ggaggccagtttaacacacagggatatcttattaaagatggaaattttggacaagccttt
cggcttgaaactaagcgagtggcagagacactcgatctggaattagtcgtcaattatccc
cttgacagggagaagcgatccacttacactttggtcattgaagcttttgatggtggatct
ccccacagaacaagtcagatgacactggatgtctccatattggatgtaaatgacaatgct
ccaatatttaatcagactcgatattacaccatgatctcggagagcttgcagccgggcacc
agccttctgcaggtctttgccacagatgtcgacgaggggaataatggtgtggtaatttat
gagattaacaggaggcagagtgatcccaatcaatactttgccatagattcgaagaccggt
gtgatcaaattaaacaaaggattggattacgaaatgaagaaagttcatgagctggtggtg
caggctaaagacaatgccacagagcctgaggtaacaacagcatttgtaactgtccaggtg
aaggattacaatgacaatcagcccacactcaccatcatctttctcagtgaagatggttca
cctcacatctcagagggagctcaacctggccaatttgtggccaggatctctgtgtcagat
cctgactatggagaatatgctaaagtcaatgtatccctggatggtggtgatggtaaattt
ggactgacgacaaaggacaatattatttatctgatctgtgtggaccaggttttagacaga
gaggaacaagatgcgtaccagttgagtgttatggcgactgattctggaacaccaccattg
agggctgaatccacatttaccatccacgtgactgatgttaatgacaatcccccagtcttt
gatcacatgggatatagacagtccattccagaggtcctgtaccctggaagttttgtgcta
caagtgacagccacagataaagatgagggcagtaatggtgaaattctgtacagcatcgtc
agcaacccaaagtcgcattctgattggttcaccatagatcaagtcactggagttattacc
acagccgcaactttggattatgaaacagatcctgcgaccagattgacggtgatggccact
gatcggggaaatactcccatgtcctcctctgtcactgtcaccatagtgatacaggatgtt
aatgataacgagccagtgttcagcagcaatttttataatacatcaatcaaagaaaatgag
ccaatggggacttgcttcctccaggtctcagccacagacgccgacagtggaagttttgga
accatcacgtactccatcggcttcggaattggcagttcggctcccacccagttcaccatc
aaccagctgacagggagagtttgcacgacaaggcaactggatcgggatgagggacccaaa
cactacgagttcactgtgacggcagtcgatgggggtggtctgaagtccatggcctatgtg
aaagtttacttggacgatatcaatgataacaggcccgtgttctatccagtgcagtacgca
gccagcatcagtacccagagtttacctgggaccgccgtgctcagggtctctgcatttgac
aaggatggaggccgcaatggaaaagtgacatatcggattttctcgggcaatcagctgtct
ttattcacgctcaacaaggacacaggagtcctctcactcgtcgctcacttgcatggcaga
gcggacatggtgcagcgattggtcatctccgcacaagacccagatggtctcatgtcattg
gtcaacgccatggtgaatatcagcatcgtctcgggtaccatttcaccaccactcttccaa
caagctcaatatttcttcacaatccctgaagatgtgaggagaggatcgcatatcggctca
gtcagagctctgaactccccaggtcgctctgattctgtctcctacaccatttcctctggc
gatcccaatggctactttgcgattggtgttggctcgggcatgatccggacaagtatcccc
ctggaccatgaatcccaccctgttgtgattctggatgttcaagcgtgcagtggatctccg
cctgcttacagcagtacaaaagtcaagatcacaatctctgacatcaacgataacacacca
acattccccacctcctccgagtccattctcgtgccggagaacaccgagattggctccctc
atctatacggttaatgcacaggatcaggatagtggggccaatgggcaggtgcagtttgac
attgtttctaacacagagagaacgttcagcatcgaccgatcttctggaaagctccgtgtg
attggacctttgagctacgagatggtctcacattatgagctggaaattgtggccaaggac
aatggtgccccacaactcagctccaccttcactttgatggtccatgttcaggatgcgagc
gataatgccccaatcttcgacactttgacctatagggttgaggtcaaggaagggacacct
gtcaacactcaatttcttcaggtccgcgcactgatccaggacagaagcacccacatcact
taccatctgcgttctgatggagacgcagccaattttggcatagtatctaagagtggctgg
ctgtatgtgaaaagtgctcttgatcgtgaaaacaaagacctgtttagtctgactgttgtg
gcttccagtgatgagggagaccagaaaaaaacaggaacgacgatggtgagagtttgtgtc
actgatgagaatgacaatgctccaaaactcacagagaaccgatatttcttcacagtccag
gagaacataccaccctcatccaccattggacgtatcctagcaacggatcgagatcatggg
ataaacagcaaactcagctacagactgttcccagctcactcgagctttcacatcaactca
ctgaccggtgatatctcagtgaagagctcgtcaggtctcgattatgaagaaactcccagg
ttacggctggtgattaaagcagaatcgccatcctcctttgttttcacgtctgtcacactc
aacctccatgatgtcaacgacaatttgccacatttccagctgcagaattatgtggccttt
atctgggaggcgcagggttacaacacaccaatcatgcaggttttggcaaatgatttggac
caagggcaaaatggccaagtgacttattccatcgcagcttcttcccagagtgacctcttc
agaatcaacccattgacgggagatatcagcacagcggccatcatggaccgtgagatctgg
cccaagactcaattgcgtttgacagcaacggacagagggaccccgcggcttgtgggtaca
gccacccttactgtcatcatcctggacctgaatgacaacagccccaccatcccgttaccc
cgtgtggtgcgggtcccagagagtgagtcaccatcactgaaagtaacaattgccgagtct
gtgacactcagcagcagcattattaccgtgacagcaacggaccgggattcgggccagaac
ggacaaatcgtctacagcctggtgtctccctcaaccgcaggattctccatcaatcctcac
aatgggaccctgttcactgtacgagatgtggagttcaaggtctctgagccactggatctg
gtgattgaggcacgagatggaggctctcctcccctttcctcgctcaccactgtccagatc
caggtccaggacatcaatgaccacacgccgacctttacccacagaatgtatatggccaat
attctggaggatctacgtcctggaagcactatcttcaccttggaggccatggactctgat
atttcccaagataatagtgggctggattacaccatcgtcagtgggaatactgccaatgta
ttccaggtggagagcagtgtcaaagtggaaaatggtcagttcaggacagtgggctccatt
ctcctcctggatgctttagattttgaaacagttgctgagtacaatttaaccatcgcagtg
tcagaccggggcattcctcagcaaagtgctgtcgtttacgccattgtaacaatccaggat
gtgaatgataatcccccagtcttcaaccgtacgcagtacaaggtgacagtgagtgaaagc
gttgccgtgggaactgagatagtccgggtggctgctcacgatcctgattctggtcagaac
tccgtgcttcgatacaccattacatctggtgatgagaacgggcagtttgcagtcagcgag
atgacaggaatcgtcaggctgatgaaggctctcgatcgagaggcacaagatcaacacatc
ttcattatccaggtaaccgacagccaggggccccatcccaactttgctctggtcccattg
acggtggaagttaaggatgtgaatgacaatcacccgttcttcccaatggaaagactgagt
gccaacattcgtgaaaacctgccagctgactcacttgtggctagagtccacgccatcgac
tttgactgcggaatatttggaaagctgcaatactcgataatcagccaacccatctcccag
ccagggattggaaaagacaaagagattttttatattaaccagtccacaggagagctccac
acaaaactctccttcgattttgagaagttaaactctgtccaagttgtggtgaaagcagtg
gattctgggaattcctcagcaaccgtgacggtccaggtcctggtcaccggagaggacgag
tacgatcccgtgtttgtcaacccaacatatacctttgttgttccagagaatgcaaagaag
ggccagaagattgggcaagtgatggcgaccgatgaggatggaggtctggatgggattatt
ctgtactccctattgacaccatcacaatacttcaaagtgaataaaagctctggtgacctt
attctcaagatggacagtgagagaggtcagagcgagcaatcaaagagagaaacacggaca
atgactctcaacatccaagccaagggcccattgcctacttccagatccacaatcacccaa
acaagtattgacattacccagacttcttttggactcgctcctgagatgaacttgctgctg
attattgccttggccgtgtccctgggtattggagggattcttgccatcattggcttagct
ctggtaattgtacgagcaaaaaggaaaaagaatcacgatgaagacagctctcaactcaac
aaaattcaggataacaccctgcagaaagtggcaccagatgctgccacattaccagctagt
gaccgaatctaccaccaaaccttgccaggctactcagctgagcccacagtggtgggaggt
ccgtacacaagaggagactcgatcgatccctcgcactccagtggacgtggatcagcagag
gcagcagaagatgatgaaattcggatgataaatgagtacccccgggtgagcagtatcacc
tcctccatgcaggaacacgtgtcgacacgtggcccagactctggtatccagcaagatact
gaccagatgtcggacatttccactgatccaggaatggagtggtttaaacacaagaaaggt
agcagcctcctggtggcaggacctcagcatctgtatcgggacgatggaggtggctatata
ggaactggagttggcctgggagtttctcaaaccaaagactatgcctttgctgaagatggt
cgcccatcagcccaagggtccctgacagccattgttgccagcgatgaggaattgagaggc
agttacaactgggattacctgcttaattggtgcccacagttccaaccattggccagtgtc
ttcaccgagatcgcccggctcaaggatgaaagtgcacctcgcaaacacttccaatcaaaa
cccaaggtggaccccaagcctcgcatcgaccctcctccactcatcacttcagtggcacat
cccaacgccatgtccgtgcctcctcgactggcagtgggtcgcacccacagccatgttaca
gcaatgccacggtcccctatcaccagcgatgcctcgataacatcggcagccatgtctccc
agcttctcaccatctctctcacctctggcagctcgatcacctgctgtttccccttttgat
gtttctcaaggaccttcaacctccatcattagcaccgaacactctttagacaatcccgaa
gaaccagaactacgaatatga
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