Scyliorhinus canicula (smaller spotted catshark): 119977973
Help
Entry
119977973 CDS
T11175
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1-like isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04120
Ubiquitin mediated proteolysis
scau04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119977973
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119977973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119977973
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119977973
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119977973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
Herpes_LMP1
DUF945
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
119977973
NCBI-ProteinID:
XP_038675149
LinkDB
All DBs
Position
15:71830576..72071459
Genome browser
AA seq
554 aa
AA seq
DB search
MGSVLSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAAHEPVKTLRSLVNIRKDSLRLVRYKDEVDSPNEENAKPKVLYSV
EFTFDADARVAITIYCQATEEFQSGMAVYTSKHPYMHSETIHYKRGVSQQFSLPSFKIDF
SEWKEDEINFDLEKGVFPLVIRAVVDEVDEYSGHAHILLAAMEKHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCSTC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDDHSASEHIPP
GFEPVSLLEALNGLRSLSPSIPSAPLYEEINYSGIGDGLSPSGRQLSAIDKMVDNCPQKP
KLSKSSESSLRSPSSPIQEEDEEKLSEDSDVLLQKNGPQRPNESSSQESTTLAESPEKCT
QNEVERTSSEEIVQDDNNEHGSHAIEDGDTPLELTLPGTSDSTESLKSQSTNSSSQPLLA
ASNSVHIEDENQVP
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggtgctcagccggagaatcgcaggagtcgaggacatcgacatccaggccaac
tcggcctacagatacccaccgaaatccgggaattactttgcaagtcatttcttcatgggc
ggtgagaagtttgatacaccacatcctgagggatacctgttcggtgagaatatggatttg
aatttcttgggaaaccgccctgtgcagtttccatacgtgacaccagctgctcatgaacct
gtgaaaactttacgcagtttggttaatattcgaaaagactctcttcgcttggtcaggtat
aaagatgaagttgacagtccgaatgaagagaatgcaaagccgaaagtgctatacagtgtg
gagttcacctttgatgctgatgcacgtgttgctataacaatttactgccaggcaacagag
gaatttcagagtggtatggcagtatatacatcaaagcatccttacatgcattccgagacc
atccattacaagcgaggggtgagccagcagttctcacttccttcttttaagattgacttc
tccgaatggaaagaagatgagataaactttgatctagagaaaggagtttttcctttagtc
attcgggcagtagttgatgaagtggatgaatactctgggcatgcgcatattcttttggct
gcaatggaaaaacatgtcgatggaagtttttctgtgaagccattgaagcaaaagcagatt
gttgaccgagtcagctatctgttacaagaaatatacggcattgaaaataagaataaccaa
gaaacaaagccttcggatgatgagaacagtgacaacagcaatgagtgcgttgtgtgcttg
tctgacctccgtgatactttaatccttccctgcagacatctgtgcttatgcagtacctgt
gcagatacactacggtaccaggctaataactgccctatctgcagattgccatttcgagca
ttgttgcagatccgagctgtgaggaaaaaacccggggccttgtcaccggtttcatttagt
cctgtcttggcacagacgatggaccatgatgaccattcagcatctgagcacatccctccc
ggatttgagccagtttccttactggaagctttaaatggacttcgatcactttctccatcc
atcccttctgctcccctatatgaagaaatcaactattctggaattggggatggcttgtct
ccatctggcaggcagctgtcagcaatagacaagatggtagataattgtccccaaaagccc
aaactgagcaaatcctcagaaagcagtctgcggtcaccatcttctccgatacaagaagag
gacgaagaaaagctttcagaagattccgatgttcttttacaaaagaatgggccacaacgg
ccaaatgaatcaagctcacaagaaagtactacgcttgcagaatccccagaaaaatgcaca
caaaatgaagttgagcgaactagctctgaggaaatcgtacaggatgacaacaatgagcac
ggtagccatgctatagaagatggcgatactcctctcgagctgactctaccaggaacctca
gactcgactgaaagcctgaaaagccagagcaccaacagttcatctcagcctcttcttgct
gcctccaattctgttcatatagaggatgagaaccaggttccttga
DBGET
integrated database retrieval system
