Scyliorhinus canicula (smaller spotted catshark): 119978054
Help
Entry
119978054 CDS
T11175
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04120
Ubiquitin mediated proteolysis
scau04137
Mitophagy - animal
scau04144
Endocytosis
scau04340
Hedgehog signaling pathway
scau04350
TGF-beta signaling pathway
scau04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119978054 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119978054 (smurf1)
04350 TGF-beta signaling pathway
119978054 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119978054 (smurf1)
04137 Mitophagy - animal
119978054 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
119978054 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119978054 (smurf1)
04121 Ubiquitin system [BR:
scau04121
]
119978054 (smurf1)
03029 Mitochondrial biogenesis [BR:
scau03029
]
119978054 (smurf1)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119978054 (smurf1)
Membrane trafficking [BR:
scau04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119978054 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
119978054 (smurf1)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
HECT type E3
119978054 (smurf1)
Mitochondrial biogenesis [BR:
scau03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119978054 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119978054
NCBI-ProteinID:
XP_038675329
LinkDB
All DBs
Position
15:complement(59031589..59195077)
Genome browser
AA seq
693 aa
AA seq
DB search
MALDQCHSTDTVKTHLIPKWNQHYDLYIGKADSITISIWNHKKIHKKQGAGFLGCVRLLS
NAISRLKDTGYQRLDLCKLNPPDSDTIRGQIVVSLQTRDRIGTGGPVVDCRGLLDNDLPE
GPLFEDSGPGRPLSCIMEDTVPFTDMTGAAGGGNCQLIESPNQEQRLQTQRIRNFGVRVQ
MHTPQSRPQGHQSPVLPEGYEQRTTVQGQIYFLHTQTGVSTWHDPRIPRDLTNFNYDELG
PLPSGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNNPSQLKESNQPLPVPTEAPVEE
GEGEWSVPRCERDLVQKLKVLRHELALQQPQAGHCRIEVSRDEIFEESYRQVMKMRPKDL
KKRLMVKFRSEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSAVNPE
HLSYFHFVGRIMGLAVFHGHYINGGFTLPFYKQLLGKPIQLSDLETVDPELHKSLVWILE
NDITPVLDHTFCVEHNCFGRIIQQELKPNGRNVPVTEENKREYVRLYVNWRFMRGIEAQF
LALQKGFNELIPQHLLKPFDQKEIELIIGGLGKIDIKDWKANTRLKHCTSDSNIVKWFWQ
TVEMFDEERRARLLQFVTGSSRVPLQGFKALQGSTGAAGPRLFTIHLIDANTENLPKAHT
CFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctctggatcagtgtcactcgacagatacggtgaaaacacacttgatcccaaaatgg
aaccaacactatgacttgtacattggaaaagcagactcaattactataagcatatggaat
cacaagaaaatacataagaaacagggagctggcttcctgggctgtgttcggctgctatca
aatgccatcagtaggctaaaggacactggctaccagcggttagatctatgcaagctcaat
cctccagacagtgatacaatacgagggcaaatagtagtaagtttacaaacacgagatcga
ataggaactggtggtcctgttgtagattgtagaggactattggacaatgatctacctgag
gggccactttttgaggattctggacctggaaggccgctaagctgtattatggaggacacc
gtaccgtttacagacatgacaggtgctgcgggtggagggaactgccaattgatagagtct
ccaaaccaggaacagagacttcagacacagcgaatccgaaattttggggttcgagttcaa
atgcacacgccacagagccggccgcaaggccatcagtcacctgtattgccagagggatat
gagcagcgaacaactgtacagggacagatttatttcctgcatacacagactggagtcagc
acttggcacgatcctcgaattccaagggatctaacaaatttcaactatgatgagcttggt
cctttgccttctgggtgggaagtcagaagtacagtgtctggaagaatatattttgtggat
cacaacaaccgaactacacagtttacagatcccagactgcaccatataatgaacaatcca
tcacagttgaaagaatcaaaccagccattgccagtgccgacagaggcaccggtggaagaa
ggggagggtgaatggtctgtcccaagatgcgagagggatctagtacagaagttgaaagtc
ctgaggcacgagcttgctttgcagcaaccgcaagccgggcactgccgcattgaagtctcc
agagatgaaatctttgaggaatcatatcggcaagtgatgaaaatgagaccaaaggacttg
aagaagcgtttaatggttaaatttagaagtgaagaagggttggattatggtggagttgcc
agggagtggttgtatttgctctgtcatgaaatgttgaatccttactatggactatttcag
tattcaactgataatatttacatgctacagatcaacccagattctgctgttaatcctgaa
catttgtcatactttcattttgtgggtcggataatgggacttgccgtattccatgggcac
tacattaatgggggtttcacattaccattctacaagcaactgttgggtaaacctatccag
ttatcagacttggaaactgttgacccagaattgcacaagagcctggtttggatccttgaa
aatgacatcacacctgtacttgatcatacgttttgtgttgagcacaactgttttggccgg
attattcaacaagagctgaaaccaaatggcagaaatgttcctgtaacagaggagaataaa
cgagaatatgtgaggctttacgtgaactggcggtttatgagaggaattgaggcacaattt
ctggctttgcagaagggatttaatgagcttattcctcaacatctacttaaaccttttgat
cagaaggaaattgagctgattattggtgggttgggaaagattgacatcaaggactggaaa
gctaacacacgtctaaagcattgtacctcagacagcaatattgtgaaatggttctggcaa
acagttgagatgtttgatgaagaaaggagagcacggctccttcaatttgtgaccggatct
tcccgggtacctctgcagggattcaaggcactacaaggttctacaggtgctgcaggccca
agactttttaccatccatctgattgatgccaacacagagaaccttcccaaagcacatact
tgctttaaccgtatagacattcctccttatgagtcctatgagaagctttacgagaagttg
ttgacagcagtcgaagagacttgtggctttgcagtggagtga
DBGET
integrated database retrieval system
