Scyliorhinus canicula (smaller spotted catshark): 119978061
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Entry
119978061 CDS
T11175
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119978061 (cacna1ha)
04020 Calcium signaling pathway
119978061 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119978061 (cacna1ha)
Ion channels [BR:
scau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119978061 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119978061
NCBI-ProteinID:
XP_038675347
LinkDB
All DBs
Position
15:17266956..18073120
Genome browser
AA seq
2443 aa
AA seq
DB search
MTDGERRQSAHPLGNEDVRVPVAGRFPTDAEADGGGGNVAMGSVGPSSGSSFSAQELGVV
ETASEAATEQLPYPALAPAVFFCLKQTTRPRSWCLKVVCNPWFEHVSMLVILLNCVTLGM
FQPCEDVECKSERCTILQAFDDFIFAFFAVEMVTKMVALGIFGQKCYLGDTWNRLDFFIV
MAGMLEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFF
VFFIFGIVGVQLWAGLLRNRCFFEDSFAMYYNVSLPLYYQIDGDETPFICSLPRDNGMQK
CQALPNLKENGAECFLTLDSYNHPRYNLEMNDSSGCINWNQYYNVCRTGDINPHKGAINF
DNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQ
FSETKQRENQLMQEQRARFLSNDSTIASFSEPGSLYDELLKYICHLFRKMKRRILRLYNS
WQNKQRKKVTPNSSNVQERKWRNKGRVRSIHHLIHHHHHHHHHHYHISNGSSRAQQGSPE
LCDLEMKSLRAGSKLMLPSSSLNHQNPSSGAESVHSIYHADCHFESPQMTCKSSNAANAK
LMAGLTHHGGMNYPTIVPSVSSRSSCTPKLKGKRSSNTPITMGKGNPNMNLADSYGKLHH
FVGEHAEGIFRAASRLSGLNVPCSAPNTQAGILTCELQNCPYCARFLENPDLQLSDSGSG
DSDADGVYEFTQDIAQGDQRDRIHKNKKKPKEKNKLIQLWTQFSEKMKRIVESKYFNRGI
MIAILINTLSMGIEYHEQPEELTNVLEISNIVFTSMFALEMILKLLAFGLFGYIKNPYNI
FDGIVVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFC
MLLMLFIFIFSILGMHLFGCKFSLKTENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVV
LYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEEKTSANFD
DECERFKDNSSELKMYSVVMTSNGHLDSRSSIPPPIIMRTAATPMPTPKSSPYMDSIHTY
LESRRGSSASIDPMNYDQRSLSSIRSSPCVPWGTSSNWGSRRSSWHSLGRAPSLKRKNQS
SERESLLSGERHEICGEDDESEDAKSSKAGSLSGWSLHHRAESFDTKGSLDLPELLQVPV
LRHPVTLNPISMTPCDYQDCNGKSLNIPNEVLPRMDNHKDDPNDYEDEIDDSYCFRIRQF
LEPYKPSWCKTHEDWALYLFAPQNRFRIMCEKIIAHKMFDHVVLVFIFLNCITIALERPA
IDPKSTERMFLSVSNHIFTAIFVLEMALKVVALGFFSGENAYLQSSWNILDGILVFVSVI
DIIVSLASAGGGKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLIC
CAFFIIFGILGVQLFKGKFYHCDGHDTRNITNKSECLQANFKWVRRKYNFDNLGQALMSL
FVLSSKDGWVNIMYDGLDAIGIDKQPQRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVEN
FHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPVRLHIHKLCTNHYLDLFI
TFIIGINVITMSMEHYHQPISLEEALKYCNYVFTIVFVIESILKLVAFGFRRFFKDRWNQ
LDLAIVLLSIMGITLEEIEMNASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVV
QALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGLSRHATFENFGMAFLTLFR
VSTGDNWNGIMKDTLRECGSDDRHCLTYLPFFSPVYFVTFVLIAQFVLVNVVVAVLMKHL
EESNKEAKEDAELDAEIELEMLRAQGASTSNIGQTPILDGRAAEASQESIRLESPVHVKQ
LTEDPRYRKMVGENQTENLLTVRKVSVSRMHSLPNDSYMFRPVRSAQTHFPLHEVDSHQG
SVTSVQSQPAEVSAYPGVPTEVIHHNFASTSHITLPKIPPPQRPPRSPSFNRLLHRQESS
RNDSVNVMNMESNNSLKIESSDSLQPKVSPHHILVPPLMHSTPLSPRVTPQFSPPLTQRN
RQSSVYTQKQVYSQHSIPSRSPSHSSGSNSPASSFFNTVDPADEEVCYINNSMRNWRRQS
EARSLSLSPFLSPNPSVVALKNSNSTTSLAGVGREKDLKKFYSVDAQGLLAKPSWTDDPR
RHSIEICPSIDDEDASLQFEGSFSSEEKQEPSAHVQSDSEYIFAAQRKKKTSPPCISIEP
PKEGESGPSSHTAATEARMHLRKRTLSFESMAHRDSVELAELQPGNQSSKTDQRIPPACQ
SKHLTIPDLSFDHSDVNSLSSLSDLFSDSNHSTPSSSVSADSRVELLASERKKTDHLKMP
SENPDSHRPENSTEVLSVTNTPLRKRGLIRMVSTREDTDDLVV
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggcgagaggaggcaatcggctcaccctctggggaacgaggatgtccgggtc
ccggtggccggcagattcccgacggacgccgaggctgacggcggcggtgggaatgtcgca
atgggaagcgtgggaccatcgagcggcagcagcttctcggctcaggagctcggagtagtg
gagacagcgtcagaagccgccactgagcagctcccatacccggccctagcgcccgccgtc
ttcttctgcctcaagcagacaacgcgaccgcggagttggtgcctcaaagtggtttgtaac
ccatggttcgagcacgtcagcatgttggtaatccttttgaattgtgtcacgttgggaatg
tttcagccatgcgaagatgtggaatgtaagtctgaaaggtgtactatacttcaggcattt
gatgactttatttttgcattctttgctgtggaaatggtcacaaaaatggtggctcttgga
atatttgggcaaaagtgttacctgggagatacatggaatcgtctggatttcttcattgta
atggcagggatgctggaatattcactggatggacacaatgcaagtctgtcagcaatccga
actgtccgggttctcaggccattaagagccattaatagagtgcctagtatgagaatacta
gtgactctactactagatactctgcctatgttaggcaatgtcctccttctttgttttttt
gtcttctttatatttggaattgttggagtgcagctgtgggctgggctgttaaggaacagg
tgtttttttgaagacagctttgcaatgtattacaatgtttctttacctctatattaccag
attgatggtgatgaaactccatttatttgctcactaccacgggacaatggcatgcagaaa
tgtcaggcccttccaaatttgaaagaaaacggagctgaatgttttcttaccttagattct
tataaccacccaagatataacctggaaatgaacgactcaagtggctgcataaactggaat
caatattacaatgtgtgcagaaccggagatataaacccacataagggtgccattaatttt
gataatataggatatgcctggattgctatttttcaggttattaccctggaaggatgggtg
gatatcatgtattatgttatggatgcacattctttttacaattttatatattttatactg
cttataatagttggttcattcttcatgattaacctgtgcctggttgtcatagcaactcag
ttttcagaaacaaagcaacgtgaaaaccaattgatgcaggagcagcgagcccgcttcctt
tcaaatgatagcacaattgccagtttctctgagcctggaagtctctacgacgagcttctg
aaatacatttgccatctctttaggaaaatgaagcggcggatattgcgcctttacaacagc
tggcaaaataaacaacgaaagaaggtcaccccaaacagctcaaatgttcaggagaggaaa
tggcggaataagggacgtgtaaggtcaattcatcatttaattcaccaccatcatcatcat
catcaccatcattatcatatcagcaatggtagttcaagggcacagcagggcagtccggaa
ctttgtgatctggagatgaaatcattacgagctggcagtaagctcatgcttccttcatct
tcactaaaccaccagaatccttcttcaggtgccgaatcagttcacagtatttaccatgcc
gactgccactttgaaagcccacagatgacatgcaagtcttccaatgcagctaatgctaag
ctaatggctggccttacacatcatgggggcatgaactatccaacaatagttccatctgtg
tctagtagaagcagctgcacaccaaaactaaaaggcaagagaagcagtaatacacccatc
actatgggcaaagggaaccctaacatgaacttggcagattcctatggcaaactgcatcat
tttgtgggagaacatgcagaaggaatctttcgagctgcaagcaggttatcaggactcaac
gtgccatgttctgcacccaatactcaggctggtattttgacttgtgaacttcagaactgc
ccctattgtgctcgttttttggaaaacccagacctccagctcagtgattcaggaagtggt
gactctgatgctgatggtgtgtacgaatttacacaagacattgcgcaaggtgaccaaaga
gatcggatacacaagaacaaaaagaaaccaaaggaaaagaataaattaatccagctttgg
acgcaattctctgaaaaaatgaaaagaattgtggaaagtaaatatttcaaccgtgggatt
atgatagccattctgatcaacacgttaagcatgggtattgagtaccatgagcagcccgaa
gagctcaccaatgtcctggagatcagcaacattgtattcaccagcatgtttgccctggaa
atgattcttaaacttcttgcatttggtctctttggttacattaagaatccatacaacatc
tttgatggaattgtcgttattattagtgtgtgggaaattattggtcagtctgatggtggc
ctttcagtgctgagaacattccggctgctccgagttttgaagctggtccgtttcctgcct
gcgttgcggcgccagctagtggttctgatgaaaaccatggacaatgtggctacattctgc
atgttactcatgctattcatatttatcttcagtattctcggcatgcacctgtttggatgt
aagttcagcctgaagactgagaatggagacacaatcccagacagaaagaattttgattct
ttattatgggcaattgtcactgtatttcagatccttactcaggaggattggaatgtagtc
ctgtataatggaatggcctccacatcaccctgggctgctctctactttgtggcattaatg
acatttggcaactatgtgcttttcaacttgctggttgctattcttgtggaaggcttccaa
gcagagggtgatgccaacagatcagatacagatgaagaaaaaacatctgctaattttgat
gatgaatgtgagcgatttaaagataattcttctgaattaaaaatgtattcggtcgtcatg
acatcaaatggacatttggattcgcgaagcagcataccaccaccgattatcatgcgtact
gctgctacgcccatgcctacaccaaagagttcaccatatatggattcaattcatacttac
ttagagtccagaaggggcagcagtgcttccattgatccgatgaattatgaccagagatct
ttgtccagtattcgcagttcaccttgtgtcccttggggcaccagcagtaattggggtagt
cgccggtcaagctggcatagccttggtagggcacccagcttgaagaggaagaatcagtca
agtgaaagggaatctctgctctctggcgaaaggcatgaaatctgtggtgaagatgatgaa
tcagaagatgcaaagtcaagcaaagctggcagccttagtggatggtccttgcaccatcga
gcagaatctttcgataccaaaggatccttagatttgcctgaactactacaagtaccagta
ctgcgacatcctgtgaccttgaatccaatcagcatgacaccttgtgactatcaagactgc
aatggcaaatccttaaatattccaaatgaggtcttacctcgtatggataatcataaagat
gacccaaacgattatgaagatgaaatcgatgatagttactgttttagaatccggcaattt
ctggagccatacaaaccaagttggtgtaaaacacatgaggactgggcactttatttattc
gctccgcaaaacaggtttcgcattatgtgcgagaagatcattgcccacaagatgtttgac
catgtggtcttggtttttatatttctgaattgcattactattgctcttgaaagacccgcg
atagacccaaagagtacagaacggatgtttttgagcgtctcaaaccacatcttcactgct
atttttgttcttgaaatggctctgaaggttgtagcattaggattcttttctggtgagaat
gcttatctccaaagcagctggaatattctggatggcatcctggtctttgtttctgtaatt
gacatcattgtctccctggcatcagcgggaggaggaaagatccttggtattctccgtgta
ctgcggcttttgcggaccctgcgtcctctccgagtcatcagtcgagctccaggcctcaaa
ctggtagtagaaaccttaataacttctctgagacccattgggaatatcgtactcatctgc
tgtgctttcttcataatctttggaatcctgggggtccagttgtttaaaggcaagttctac
cattgtgatggacatgacaccagaaatatcacgaacaagtcggaatgtttgcaagctaac
ttcaaatgggtgcgccgtaaatataattttgacaatctgggacaggcattgatgtcactc
ttcgttttatcctccaaagatggttgggtaaatataatgtatgatggtctggatgctata
ggaatagataagcagccacaaaggaaccacaacccatggatgcttctgtatttcatctcc
tttctcctgattgtgagcttcttcgtgctaaacatgtttgtgggggttgtggtggagaac
ttccataagtgccggcagcaccaggaggccgaggaggcccgccggcgggaggagaaacgt
ctgcggcggctagagaaaaagcgcaggaaagcccaacgcagaccttattatgctgattac
tctcctgttcgacttcacatccataagttgtgtaccaaccactacctggacctatttatc
acattcattattggtataaatgttatcactatgtccatggaacactaccaccaaccaatt
tcacttgaggaagctctgaagtattgtaactacgtgttcaccatcgtctttgtcattgaa
tctattcttaaactcgttgcatttggcttcaggagattctttaaagacaggtggaaccaa
ctggatctggctattgtgcttctctcaataatgggaattaccttggaagaaattgaaatg
aatgcctcactccctattaaccctactatcattcgcatcatgagggtgttacgaattgca
agagtgctcaaactactcaagatggctactggaatgagggctttacttgatacagttgta
caggctttgcctcaggtgggaaatctcggcttattgttcatgcttttgttttttatctat
gcggctcttggagttgagctctttggaaagctggtttgtaatgatgaaaatccatgtgaa
ggcttgagtcgacacgcaacatttgaaaatttcggtatggcatttcttactttattccgt
gtttctactggtgataactggaatggaataatgaaggatacattgcgagaatgtggaagt
gatgataggcactgcctcacgtacctccccttcttctctcctgtgtactttgtcactttt
gttctaatcgctcagtttgtgctggtcaatgttgtggtcgcagttctaatgaaacacttg
gaggagagcaacaaggaagccaaagaggatgcagaacttgatgcagaaatagagctggaa
atgttacgggcccaaggagcatcaacgagcaacatcgggcaaacccctatccttgatggc
agagctgcagaggctagccaggagtcaataagacttgaatcaccagtacatgtaaaacaa
ttgacagaagatcctcgatacagaaaaatggtaggagaaaatcaaaccgaaaatctgctt
actgttcggaaagtttctgtgtctcgaatgcattccttacctaacgacagctacatgttt
cgcccagttagatcagcccaaactcattttccgctacatgaagtggattcccatcagggg
tctgtgacttcggtccagtctcagcctgccgaagtttctgcatatcctggagttcccact
gaggtaattcatcataactttgcttcgaccagccacatcaccctccccaaaatccctcct
ccacagagaccaccgagatcacccagttttaacaggctgctacatagacaggagtcctcg
agaaatgactccgtgaacgttatgaatatggaatctaataacagcctgaagatagagtcc
agtgacagtctccaaccaaaagtttcacctcatcacatcttggttccaccattaatgcac
tccacaccattgtctccaagggtcactcctcagttttcaccaccattgactcaacgcaac
aggcaatcaagtgtctatacgcaaaagcaggtctacagccagcatagtatcccaagccgc
tcgcccagtcacagcagtggcagcaacagcccagcgagctccttcttcaacactgtggac
ccagctgatgaagaagtgtgttacatcaacaactccatgagaaactggaggagacaatct
gaagcaagaagcctatctttatcacctttcctttctcccaatccatcagttgtggcttta
aagaactctaacagcacaacaagtttggctggtgttggcagggagaaagacttaaagaag
ttttatagtgttgatgcacagggattattggcaaagccttcttggacagatgacccaagg
agacattcaattgaaatatgcccatcaattgatgatgaagatgcaagcttacagtttgaa
ggctcattttctagtgaagaaaagcaagaaccttctgcccatgttcagtcagattctgaa
tatatttttgcagctcaaagaaagaaaaagacgagtccgccctgtatctcaatagaacct
ccgaaagagggtgaaagtgggccgtcttctcatactgcagcaactgaagccaggatgcat
ctgcgcaagcgcacactgtcctttgagtctatggctcatagagattctgtagaacttgca
gagttgcaacctgggaaccagagctcaaaaacagaccaacgaattcctccagcctgtcaa
agcaagcatcttaccattccagacttatcattcgaccactcagatgtgaactccttaagc
agtttatctgacctgttttccgacagcaatcattcaacaccttcttctagtgtctctgca
gattcaagagtagaattacttgcctccgaacggaagaaaactgaccatttaaaaatgcca
agtgaaaaccctgacagtcataggcctgaaaacagtactgaggtactcagtgtcactaat
acgccccttaggaagcggggtcttatccgaatggttagcacacgggaagacactgatgat
cttgtggtatag
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integrated database retrieval system
