Scyliorhinus canicula (smaller spotted catshark): 119978082
Help
Entry
119978082 CDS
T11175
Name
(RefSeq) decorin-like
KO
K04660
decorin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04350
TGF-beta signaling pathway
scau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119978082
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119978082
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
scau00535
]
119978082
Proteoglycans [BR:
scau00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
119978082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRR_5
LRR_9
LRRNT
LRR_14
Motif
Other DBs
NCBI-GeneID:
119978082
NCBI-ProteinID:
XP_038675395
LinkDB
All DBs
Position
15:142416100..142676943
Genome browser
AA seq
370 aa
AA seq
DB search
MSTGEQLKQVTMSGAVQVFISCLVAFVLCQAKPFKQSSFFDFVGEESGSAAEPTPELPVV
RRYKCPPRCRCHMSVVQCSNLGLAKVPAYILPETTLLDLQNNKIRELKENDFKNLKNLQI
LILVNNRLRKIHPKAFSSLHNLRRLYLSKNLISSVPENMPKTLLELHICDNKINYVKKKP
FDGMSNMFALELSRNPLMAKGIAKGAFQGLKTLSYLRITETGLSEVPKDLPSSISEMHLD
RNRILKVEVDDFKNLSTLIRLRLSSNKIRYFANKTLGHMPKLQDLHLDNNRLLSIPPGLP
QHKNIMALYLNDNQIAHLKDGDFCPQMDDPMKSPYSRISLYGNPIPYWEIEPGVFRCAVD
WIFIQLERPN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaggagaacagctgaaacaagtcaccatgagtggagcggttcaggtcttcata
tcctgcctagtggctttcgtactctgccaggcgaaacccttcaagcaatctagcttcttc
gactttgtgggagaggaatcaggatctgcagccgaaccaactcctgagcttcctgtggtc
cgtcgatacaaatgtccacccaggtgtcgctgtcacatgagtgtggtgcagtgttcgaat
ttaggtctcgcaaaagtacctgcatacattttacctgaaaccaccttgctggatcttcag
aataacaaaatcagagagctgaaggaaaatgatttcaaaaatctgaagaaccttcagatt
ttaattcttgtgaacaacagactgcggaagatccaccccaaggccttttcctcacttcac
aatctcagacggttatatctttccaagaatctaatcagcagtgttccagagaacatgcca
aagactctacttgaactccatatatgtgacaacaaaataaactatgtgaaaaagaaaccc
tttgatggaatgtccaacatgtttgctctcgagttaagtagaaacccactgatggcaaaa
ggaattgcaaagggagcctttcaaggcttgaaaactctgtcatatctccggatcactgag
acaggactttccgaagttccgaaagatctgccaagttcaatatctgagatgcacctcgac
cgcaatagaatcctcaaagtagaagtggatgacttcaaaaacctcagcactttgatcagg
ttgaggctgagttccaacaaaatcaggtattttgcgaacaagactctcggccacatgcct
aaactccaggatctccacctggacaacaatagattgctttctattcctccaggcctcccc
cagcacaaaaacatcatggccctctatctcaatgacaaccagatagctcacttaaaagat
ggtgacttttgccctcagatggatgacccaatgaagagcccgtacagcaggattagcctg
tacgggaaccctattccctactgggaaatcgagcctggagtcttccgctgtgctgtggac
tggatattcatccaactggaaagacctaactga
DBGET
integrated database retrieval system
