Scyliorhinus canicula (smaller spotted catshark): 119978202
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Entry
119978202 CDS
T11175
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03013
Nucleocytoplasmic transport
scau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119978202 (rnps1)
03015 mRNA surveillance pathway
119978202 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119978202 (rnps1)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119978202 (rnps1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
119978202
NCBI-ProteinID:
XP_038675561
LinkDB
All DBs
Position
15:28122086..28147670
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AA seq
280 aa
AA seq
DB search
MAPSPTKRKEHTQEKSKDRNKEKSSIKESSEKERGRDKTRKRRSASTGSSSTSSSSSSGS
SSTSASSSGSSSSSASSRSGSSSSSRSSSSSTSSGSPSPSRRRHTNRRRTRSKSKSPKRD
DKERKKRSPTPRPTKVHIGRLTRNVTKEHIMEIFSTYGKIKLIDMPLDRSHPHLSKGYAY
VEFENPDDTEKALKHMDGGQIDGQEITATAVLAPRPRPMTRRITPPRRMPPPPPMWRRTP
PRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggctccttcaccaaccaagcgtaaagaacacacacaagagaaatccaaagacaggaac
aaagagaaatccagcattaaggagtcaagtgagaaagaacgaggtcgtgataagacgcgc
aagaggaggagtgcctcaactggaagcagcagcactagttctagctccagttcgggatcc
agttccacctctgcctccagcagtggatcgagctcatcctctgcctccagtcgctctgga
agttccagcagctcccgtagctccagttccagcacttcctccggatctccaagcccatcc
cggcgcagacacactaacaggaggcgcactcgttcaaaatctaaatccccaaaacgagat
gacaaggaaagaaagaaaagaagtccgactcccagaccgaccaaagtacacatcggcagg
ctgaccaggaacgtgaccaaggagcacatcatggagatcttctctacatacgggaagatc
aagctgatcgacatgccgttggaccgctcacacccccacctgtccaagggctatgcttac
gttgagtttgagaacccggatgatacagagaaggctctgaagcatatggacggaggtcag
atagatggccaggaaataacagcgactgccgtgttggctcctcgacccaggcctatgaca
cggcggatcacgccaccacgtaggatgccaccacctcctcccatgtggcgcagaacccca
ccacgaatgaggagaaggtctcggtcacctcgcagacggtcaccagtccgcagacgatca
cggtcgcgatcaccaggacggcggcgccaccgcagcaggtccagctcaaactcctcacga
taa
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