Scyliorhinus canicula (smaller spotted catshark): 119978237
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Entry
119978237 CDS
T11175
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04144
Endocytosis
scau04517
IgSF CAM signaling
scau04530
Tight junction
scau04810
Regulation of actin cytoskeleton
scau05100
Bacterial invasion of epithelial cells
scau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119978237
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119978237
09144 Cellular community - eukaryotes
04530 Tight junction
119978237
09142 Cell motility
04810 Regulation of actin cytoskeleton
119978237
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119978237
05100 Bacterial invasion of epithelial cells
119978237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119978237
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119978237
Membrane trafficking [BR:
scau04131
]
Others
Actin-binding proteins
Arp2/3 complex
119978237
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
119978237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
EIF3I
Rax2
PEP5_VPS11_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
119978237
NCBI-ProteinID:
XP_038675625
LinkDB
All DBs
Position
15:complement(58376179..58449190)
Genome browser
AA seq
370 aa
AA seq
DB search
MSRHQFLFEPITCHAWNQDRTQIALSPNNHEVHIYKKSGNQWIKNHELKEHNGRITGIDW
APQSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPQENKFAVGSGARLI
SVCYFEGENDWWVSKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDTKP
SATPWGSKMPFGQVMAEFGGAGSGGWVHSVSFSATGNRLAWVSHDSTVSIVDAGKNMTVS
QTKTEFLPLLSVIFVSENNIVAAGHDCCPMLFMYDDRGSLTYISKLDIPKQSIQRNMSAM
QRFHNLDRRATTEDRNTMLETLHQNSITQVSVYEGDKRDCRKFCTTGIDGAMTIWDLKSL
ESSIQGVRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatcaattcttgtttgagccaatcacatgccatgcttggaatcaagatcga
acacagatagcacttagccctaataaccatgaggttcatatttataagaaaagtggaaac
caatggatcaagaatcacgaactgaaggagcataatggtcgaataacaggcattgactgg
gctccccagagtgatcgcattgtaacctgtggcgctgaccgtaatgcttatgtatggagt
cagaaagacggtgtatggaagccaacattggtcattctacgaattaaccgcgcagcaacg
tttgtgaagtggtctcctcaggaaaataagtttgcagtaggtagtggtgctcggctgatc
tcagtgtgctactttgaaggagaaaatgattggtgggtgagtaaacacatcaagaagcca
attcgttctactatccttagccttgactggcatcctaataatgtcttactggcagcaggc
tcgtgtgacttcaaatgcagagttttctctgcttacatcaaagaagtagacacaaagcct
tctgccacaccctggggttccaaaatgcctttcggacaagtaatggcagagtttgggggt
gcaggtagtggtggttgggtccacagtgtttctttctctgccacaggaaaccgcctggca
tgggtcagccacgacagcactgtatctattgttgacgctggtaaaaatatgacggtttct
caaacgaagaccgaatttctccctctgttgagtgtgatttttgtctctgagaataacata
gtggcagcaggccatgattgctgtccgatgctgttcatgtatgatgatcgtggttcattg
acttacatctccaagctagacattccaaagcagagcattcagcgcaacatgtctgccatg
cagcgcttccacaatctggatagaagggcaactacagaggatcgaaataccatgctcgag
actctccaccagaacagtatcacccaagtctcggtatatgaaggtgataaaagagattgt
cggaagttttgcactactggtattgacggcgcaatgacaatttgggatttgaagtctctg
gaatcctcgatccaaggtgtacgcatcatgtga
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