Scyliorhinus canicula (smaller spotted catshark): 119978308
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Entry
119978308 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119978308
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119978308
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119978308
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119978308
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
119978308
NCBI-ProteinID:
XP_038675771
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Position
15:146375865..146391715
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AA seq
458 aa
AA seq
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MAMHPRRVRLKPWLVAQVDSGLFPGLVWLQREKRFQIPWKHATRHSPPQEEENTIFKAWA
VETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYEVCDIPQSGG
THSNPGSVPWEENDVDLEDEEEDDLSSSQPEVKMQESFPFLNLNDSPMPPANVTSCSPNE
WIKTEREQILPADPFLPAEIFSSPETWISSLPMTDLEIQFQYRGKELGPALNVSNPQGCR
LFYGDLGPMPNQEELFGPVSLEQVKFPGTDHISNEKQRLFTNRLLDVMDRGLILEVSGHA
IYAIRLCQCKVYWSGPCANGTSNPHVIERQKKVKLFCLETFLSDLIDLQRGQSNKVPPFE
IYLCFGEEWPDGKPKERKLIMVQVVPIVARMIYEMFNGEFTRSFDSGSIRLQISTPDIKD
NIVTHLKQLYHLLQTNQGHEPWQIQPPNLHMAHPLPTQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcatccaaggagggtgcggttgaagccttggctagtggcccaagtggacagt
ggccttttcccaggtctagtttggctccaacgggaaaagcgtttccaaatcccatggaaa
catgcgactcgccacagccctcctcaagaggaagaaaacacgatctttaaggcgtgggca
gtagaaacgggaaagtaccaggaaggggtcgatgagccagatccagccaaatggaaagca
cagcttcgatgtgcactcaacaaaagtcgtgaatttaacctaatttatgatggcaccaaa
gaggttccaatgaatcctctgaagatttacgaagtatgtgatatcccacagagcggtggt
acacacagcaatccaggatctgtgccgtgggaagaaaatgatgttgatttggaagatgaa
gaggaagatgacttgagctcctctcagcctgaagttaaaatgcaagagagctttccgttt
ctcaatttgaatgattctccgatgcccccggcaaatgtgaccagctgttctcccaatgag
tggataaaaactgagcgagaacagatcctgccggctgatccattcttaccagcagagata
ttcagctctccagaaacctggatcagctctctgcccatgacagacctggagattcagttc
cagtacagaggcaaagaattgggaccagctctaaacgtcagcaatccacaggggtgccgt
ctcttttatggggacctgggtccgatgccaaaccaggaggagttattcggtccagtttcc
cttgaacaagtgaaatttcctggaacagaccatatctcgaacgagaagcagcgtctcttc
acaaaccgcctgctggatgtgatggatcgagggctgattctggaagtgagtggccacgca
atctatgccattcgcctgtgtcagtgtaaggtgtactggtcaggaccctgtgcgaatgga
acctccaacccacatgtgatagagcgacagaagaaagtcaaactcttttgtttggagact
ttcttaagtgatctgattgatcttcaaagagggcaaagtaataaagtcccaccatttgag
atttacctgtgctttggagaagagtggcccgacggcaaaccgaaggaaaggaaactaata
atggttcaggttgtgcccattgttgcacggatgatttacgagatgttcaatggtgaattc
acacgttcttttgacagtggtagtatccggctgcagatctcaaccccagatattaaagac
aatattgtgactcacctgaagcagctctaccatctgctgcaaacaaatcaaggacatgag
ccgtggcagattcagcccccaaacctgcacatggcacaccctctgccaacccagtaa
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