KEGG   Scyliorhinus canicula (smaller spotted catshark): 119978344
Entry
119978344         CDS       T11175                                 
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    119978344 (tbl3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:scau03009]
    119978344 (tbl3)
Ribosome biogenesis [BR:scau03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    119978344 (tbl3)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Utp13 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SCAP NBCH_WD40 Beta-prop_Aladin Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_VPS8 WD40_like Beta-prop_pof12
Other DBs
NCBI-GeneID: 119978344
NCBI-ProteinID: XP_038675846
LinkDB
Position
15:64771931..64862344
AA seq 829 aa
MAAATIQFKTNYAVSSKIEPFYKGGKVQINKDGTYMFCTCGTKVNIIDIGTGKVTKSIEQ
EEQEDITCFSVSPDDEILVTSSRALLLKQWDWKENTCTRTWKAIHTSPVASMAFDSTSTL
LATGGCDSTIKIWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRLWNLN
TSKCVMVLDAHYSAVTSLAFTSNGNTLVSSGRDKICTVWDLKTYKSQRTVPVYETVEAVT
LLPEDEDYTALGVTSEEPHFITAGSKGILRIWEAYSGRCIYSQCVPGRPQNEADDDSEEQ
SLTHCMLVPATRKLTTVTAEHNILYYDLCTLKLERQFVGYNDEVLDVKFMGPSDTHIVVA
TNSPQLKVFELATLNCQILYGHTDTVLSLDVFKKGTKFASCSKDRTIRIWKMDKGTGEVN
CVAQGLGHAHGVGIISCSRLKESFIVSGSQDCTLKLWALTKSLGVNDNEKIIEPEILHAD
LTEKVHDKDINSVVVSPNDKLVATGSQDRTAKLWSTSDFSLVGVFRGHKRGIWSVQFSPM
DQILATSSADGTVKLWGLQDFNCLKTFEGHDASVLKTIFVSRGTQLLTSGSDGLLKLWTI
KTNECIKTLDVHEDKVWGLHSNKNDDLVVTGATDSCIVIWKDVTEIELAEEQAKQEEQIL
KQQELSNLLHEKKYVKALGLAISLNQPQTVLTVIKAILGESNGQVRLESTILKLRQDQKE
SVLKFCIIWNTNSKNCHEAQSIIQILLRNETPEQLLQYNGIKTALEGLIPYSERHFQRLS
RLFQASMFLDYMWQSMRLIEKSSDSDKQTEEMEVEAFFPTDKKAVITLT
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggcagccgccacaatacagttcaagacgaactatgctgtttccagcaaaattgaacca
ttctacaaaggtggaaaagtgcagatcaataaagatggaacgtacatgttctgtacttgt
ggaacaaaggtcaatatcattgatattggaacaggaaaggtcacaaagagtattgaacag
gaggaacaagaagatattacctgtttcagtgttagccctgatgatgagatactggtgacg
agtagtcgtgccttactcttgaaacaatgggactggaaggagaacacatgtactcgtaca
tggaaagctattcacactagccctgtggccagcatggcttttgactctacctcaacttta
ctggctacaggaggatgtgatagtacaatcaagatttgggatgttatcaagcagtactgc
acacacaatctgaagggttcctctggagttgttcacctggttgaatttcatcctgatata
tcacggcttcagctattctcctcttcgatggactataaaattcggctttggaacctgaac
accagtaaatgtgttatggtgttggatgcccactacagtgctgtgacttcactggcattc
acttcgaatggaaatacacttgtcagctctggacgtgataaaatatgtactgtatgggac
ctgaaaacctacaaatcacagagaacagttccagtgtatgagactgtggaagcagtaacg
ttactaccggaggatgaggattacactgccttgggggtgacgagcgaagagcctcatttt
atcacagcaggcagtaagggaattcttcgaatttgggaagcttattctggaagatgcatt
tactcacagtgcgtgcccggtagacctcagaatgaagctgacgatgactcggaggagcaa
tctctaacccattgcatgctcgtcccggcaacacggaagttaaccactgtaactgctgaa
cataacattctctactatgacctatgtactctaaaattagaacgtcagtttgtaggctat
aacgatgaggtgctggatgtgaagtttatgggcccaagtgacacacacattgtggtggcc
accaacagcccacagttgaaagtgtttgagcttgcaacattaaactgtcaaatcctctat
ggacacacagatactgtattatccctggatgtattcaagaaaggcaccaaatttgccagt
tgttctaaggacagaaccattagaatctggaaaatggacaaggggactggagaagtgaat
tgtgtggcgcaaggtctcggacatgcccatggtgttggtattatttcctgctcacgattg
aaggaaagtttcatcgtcagtggtagccaggattgcaccttaaagctgtgggctcttaca
aaatccctgggggttaacgataatgaaaaaattatagaacctgaaatccttcatgctgat
ttgactgagaaggtgcacgacaaggatataaacagtgtggtagtctctcccaatgacaag
ctggtggctacaggctcccaggaccgaacagcaaagctttggtcaacgtctgatttctca
cttgtgggagtgtttcgagggcacaagcgtgggatttggtctgtccagttttcccctatg
gatcagatcttagccacttcttcggcagacgggactgtcaaactgtggggacttcaggac
ttcaactgcttaaagacatttgaaggccacgatgcttccgtactgaaaacgatttttgtg
agtcgtggaactcagctgctgacgagtgggtctgatgggctactgaagctgtggaccatc
aaaactaatgaatgcatcaaaactttagatgtccacgaggataaggtgtggggtctgcac
tctaacaagaatgatgatttagttgtcactggagccacagattcgtgcatagttatctgg
aaggacgttacagagatagaactagctgaagaacaggcaaaacaggaagagcaaattttg
aagcaacaagaattatctaatttattgcacgagaagaaatatgtgaaggctttaggattg
gcaatttctttgaaccaaccccaaactgtgctaacagtgattaaagcgattcttggtgaa
tctaatggacaagtaagactggaatcaacaatactaaagttgcgacaagatcaaaaagag
tctgtgttaaagttctgcatcatatggaacacaaactctaaaaactgtcatgaagctcaa
tctattatccagatccttctgcgaaatgaaacgcctgagcaacttcttcaatacaatggg
atcaaaactgctctcgagggattaatcccctattctgagcgacacttccagcggctcagc
agattgttccaggcctccatgtttttggattatatgtggcagagtatgcgactgattgag
aaatccagtgactctgataagcaaactgaagaaatggaggttgaggcattctttccaacg
gacaaaaaggcagtgattacactgacataa

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