Scyliorhinus canicula (smaller spotted catshark): 119978436
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Entry
119978436 CDS
T11175
Symbol
vps35l
Name
(RefSeq) LOW QUALITY PROTEIN: VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119978436 (vps35l)
Membrane trafficking [BR:
scau04131
]
Protein recycling
Others
Retriever complex
119978436 (vps35l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
119978436
NCBI-ProteinID:
XP_038676004
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Position
15:complement(847861..979848)
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AA seq
975 aa
AA seq
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MAAAIWCPRRRNYGVELESCCPESVPLEFGDFHPLKLITVTESKTKKVVRKGSTSSTSSS
SSSVVDPLSSTLDGSDPLSQFAALSDPLAPATMTTGKSNANMDPGRKQRDEEDTGVGNDF
EPWAGKRSYILARYTTTEKLSINLFMGSEKGKATSPGSAVSEKVRTRLEELDDLEEGSQK
ELLNLTQQDYINRIEELNQSLKDAWATDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLI
TDILDTFGKLVYERILSMCASSRASFPGVSVSDNFGPDEVNETAKETCLNWFFKIASIRE
LISRFYVEVAIXKCNTFLSKRNGISETLPRLTSMIRGIGDPLXSIXASAYLCRVGMEVAP
HLKDSLNKKFFDFLSTFKQIHGETVQNQLAVQRVEIPVYLTLYTPAIDWILQCIAYRAPE
VLLTEMMDRCKKLGNNALLLNSVMSAFRPEFIATRSMDFIGMIKDCEESGFPKHLLFQSL
GLNLILADPPENDRLQILNEAWKVLTKLKIPQDYVNCAEVWIEYTCRHFTKREVNTVLSD
IIKHLTPDRAFEDAYPQLQSIVTKVLDQFHDFAILFSMEKFLPFLDMFQKENVKVEVCKS
IMEVFIRQQQELTRDPVILNALMHVCKTMHDSVNALTLDDEKRSLAVLISGFIRMVSFGR
DFEQQLSFYVEARSTFCNLEPVLIQLTHSVNQLAMETRKVMKGNHSRKTAAFVRACAAYC
FITIPSLTSIFARLNLYLHSGQIALANQCLSQADAFFKAAISLVAEVPKMLNIDGKMRTS
EGFLLEFLNNFFSTLLIVPDHPEQGVLYLVRGLLNVIQDYIWEDHTDSKVRIYINVLHLL
SAASQETYPYHVDKVDSNDNLYGNDPKFLAEINKLSETLIGQILDHLKTLGKDETLKRQS
ALALSLFNSIVTHGNLQNNKLNQLTVNLWNLAQKHGFADTKTMVRTLEHIKRQSKQPNMS
HFTELTLRLPLQSRT
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatctggtgtcccagaaggaggaattacggagtagaattggaatcctgc
tgtcctgagtctgtacctctggaatttggtgacttccaccctctgaaacttatcactgtc
actgagtcaaagactaagaaagttgttcgtaaaggaagtacctcatcaacatcttcatct
tccagttcagtggtggatcctctgagcagtacgttggatggcagtgaccctctgtcccag
tttgctgcattatccgatcccctggcacccgcaaccatgacaacaggaaaaagcaacgcc
aatatggatcccggtagaaaacagcgcgacgaagaggatacaggagtcgggaatgacttt
gaaccatgggctggaaaacgtagctatatactggcacgatacacaaccacggagaagctt
tctatcaacttgtttatgggatctgagaaaggtaaagccacaagtcctggatctgctgtt
tctgaaaaagtgaggactcgtttagaagagttagatgacctggaggagggctctcagaaa
gagctgttgaacttgactcaacaggattatataaacaggattgaggaactcaatcagtcg
ctgaaggacgcatgggccacagatcaaaaagtcaaagcactgaaaatagttattcagtgt
tcaaagctgctgtccgataccagcgtgatccaattttacccaagcaaatttgttttgatc
actgatattttggatacttttggcaaactagtatatgagcggattttgtccatgtgtgca
agtagtcgagcttcctttcctggagtctctgtgtcagataactttggcccagatgaagtg
aatgaaacagcaaaggaaacgtgtctgaactggttcttcaagattgcctcaatcagggag
ctcatttctagattttacgtggaggtggccatanttaaatgtaacacattcctttctaaa
cgtaatggtatctctgagactcttcctcggttgacctctatgatcagaggcattggtgat
ccattgngttctatctaggcaagtgcatatctttgcagggttgggatggaagtggcacca
catttgaaagacagcttgaataagaaattttttgacttcctctccacgtttaaacaaatt
catggcgaaacagttcagaaccagcttgctgtgcagcgggtagaaattccagtgtatctc
acactgtacactcccgctatagactggattcttcaatgtattgcgtacagagcaccagag
gttttacttacagaaatgatggacaggtgcaagaaacttggaaataatgctttgctgttg
aactcagtaatgtcagcattcaggccagaattcattgcaacaagatcgatggatttcatt
ggcatgataaaggactgtgaggagtctggctttcccaagcatcttcttttccaatccctg
gggttgaacttgattttggctgatcctcctgagaatgacaggctgcagattctcaatgaa
gcctggaaggttcttaccaaactgaagataccccaggattacgttaactgtgccgaggtt
tggatagaatacacatgcagacatttcacaaaacgagaagtcaacacggtattatcagat
atcattaagcatttaactccggaccgagcttttgaagatgcttatccacagctacaatcc
attgtaacaaaagtactcgatcagttccatgattttgcgattttattttcaatggagaag
ttcctcccgttcctggatatgttccaaaaagaaaatgtcaaagtagaagtctgcaaatct
attatggaagtttttattaggcaacagcaagaactaacccgtgaccctgtcattcttaat
gctctaatgcacgtttgcaagacgatgcacgactctgtgaatgctttgacattagacgat
gagaaaaggagtttggctgttctaatcagcggatttatcagaatggtttcatttggccgt
gactttgagcagcagctaagcttttacgtagaagccagatccacgttttgcaacttggag
cctgttcttatccagttgacccatagtgtaaatcagctcgccatggaaaccaggaaagtt
atgaaaggcaatcattccagaaagacagcagcatttgtgagggcttgtgctgcgtattgc
ttcattaccattccatcgttgaccagtatctttgcacgtcttaatctctatttgcactcg
ggacagatcgctcttgcgaaccagtgtctttcacaagctgatgccttctttaaagctgca
atcagccttgttgcagaagtgccgaagatgttaaacatcgatgggaagatgagaacgtca
gaagggtttcttctcgagttcctcaataacttcttttccacattgttgattgtgcctgat
catccggagcaaggtgtcctatacttagtgagaggtcttttgaatgtgatccaggactac
atttgggaagatcatacggattcaaaagtgcgaatttacataaatgttttgcatttgctg
tctgcagcaagtcaagaaacgtacccctaccatgtggataaagttgattccaatgataac
ctctacggaaatgaccccaaattcttggctgaaattaataagctttctgaaactctgatt
ggacaaatcttggaccatctgaagacacttggaaaagatgagactttgaagcgacagagt
gccttggctttatctttgtttaacagtattgttacccatggaaacctgcagaacaataaa
cttaaccagctaacggtaaatttatggaatctcgcccaaaaacatgggtttgctgacacc
aaaaccatggtgagaacattggaacacatcaaacgtcaaagtaaacaaccaaacatgagc
cattttacagagttaacattgaggctcccgcttcaatcccggacataa
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